RNA–Protein interactions for RNA: ENST00000451823.2

HMGB3P22-202, Transcript of high mobility group box 3 pseudogene 22, humanhuman

BASIC

Gene HMGB3P22, Length 572 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-202ENST00000451823 ACDQ96AP0 544 aa6.5□□□□□ -1.37
HMGB3P22-202ENST00000451823 ZSCAN10Q96SZ4 725 aaPredicted RBP6.5□□□□□ -1.37
HMGB3P22-202ENST00000451823 NUCKS1Q9H1E3 243 aaKnown RBP6.5□□□□□ -1.37
HMGB3P22-202ENST00000451823 APBB1O00213 710 aa6.49□□□□□ -1.37
HMGB3P22-202ENST00000451823 USP4Q13107 963 aa6.49□□□□□ -1.37
HMGB3P22-202ENST00000451823 PHTF2Q8N3S3 785 aa6.49□□□□□ -1.37
HMGB3P22-202ENST00000451823 GPAMQ9HCL2 828 aa6.49□□□□□ -1.37
HMGB3P22-202ENST00000451823 TBC1D2BQ9UPU7 963 aa6.49□□□□□ -1.37
HMGB3P22-202ENST00000451823 LOC100996750A0A140TA64 210 aa6.48□□□□□ -1.37
HMGB3P22-202ENST00000451823 SOCS7O14512 581 aa6.48□□□□□ -1.37
HMGB3P22-202ENST00000451823 TPRNQ4KMQ1 711 aa6.48□□□□□ -1.37
HMGB3P22-202ENST00000451823 TMEM214Q6NUQ4 689 aaKnown RBP6.48□□□□□ -1.37
HMGB3P22-202ENST00000451823 CFHR5Q9BXR6 569 aa6.48□□□□□ -1.37
HMGB3P22-202ENST00000451823 KRTAP4-6Q9BYQ5 205 aa6.48□□□□□ -1.37
HMGB3P22-202ENST00000451823 PRM3Q9NNZ6 103 aa6.48□□□□□ -1.37
HMGB3P22-202ENST00000451823 HRH3Q9Y5N1 445 aa6.48□□□□□ -1.37
HMGB3P22-202ENST00000451823 DNMT3AQ9Y6K1 912 aaPredicted RBP6.48□□□□□ -1.37
HMGB3P22-202ENST00000451823 LOC105371045A0A1W2PR82 267 aa6.47□□□□□ -1.37
HMGB3P22-202ENST00000451823 STAU1O95793 577 aaKnown RBP6.47□□□□□ -1.37
HMGB3P22-202ENST00000451823 GTF2E1P29083 439 aaPredicted RBP6.47□□□□□ -1.37
HMGB3P22-202ENST00000451823 EIF4G2P78344 907 aaKnown RBP eCLIP6.47□□□□□ -1.37
HMGB3P22-202ENST00000451823 NSFL1CQ9UNZ2 370 aaKnown RBP6.47□□□□□ -1.37
HMGB3P22-202ENST00000451823 PHF20L1A8MW92 1017 aa6.46□□□□□ -1.38
HMGB3P22-202ENST00000451823 THBS1P07996 1170 aa6.46□□□□□ -1.38
HMGB3P22-202ENST00000451823 SLFNL1Q499Z3 407 aa6.46□□□□□ -1.38
HMGB3P22-202ENST00000451823 ESCO1Q5FWF5 840 aa6.46□□□□□ -1.38
HMGB3P22-202ENST00000451823 IGHA1P01876 353 aa6.45□□□□□ -1.38
HMGB3P22-202ENST00000451823 MSX1P28360 303 aa6.45□□□□□ -1.38
HMGB3P22-202ENST00000451823 VAC14Q08AM6 782 aa6.45□□□□□ -1.38
HMGB3P22-202ENST00000451823 IRF5Q13568 498 aa6.45□□□□□ -1.38
HMGB3P22-202ENST00000451823 C4orf17Q53FE4 359 aa6.45□□□□□ -1.38
HMGB3P22-202ENST00000451823 GNASQ5JWF2 1037 aa6.45□□□□□ -1.38
HMGB3P22-202ENST00000451823 GALNT6Q8NCL4 622 aa6.45□□□□□ -1.38
HMGB3P22-202ENST00000451823 KLRG1Q96E93 195 aa6.45□□□□□ -1.38
HMGB3P22-202ENST00000451823 FHDC1Q9C0D6 1143 aaPredicted RBP6.45□□□□□ -1.38
HMGB3P22-202ENST00000451823 RUBCNLQ9H714 662 aa6.45□□□□□ -1.38
HMGB3P22-202ENST00000451823 A0A1B0GTH6 734 aa6.44□□□□□ -1.38
HMGB3P22-202ENST00000451823 OIP5O43482 229 aa6.44□□□□□ -1.38
HMGB3P22-202ENST00000451823 CSB-PGBD3P0DP91 1061 aa6.44□□□□□ -1.38
HMGB3P22-202ENST00000451823 OXLD1Q5BKU9 147 aa6.44□□□□□ -1.38
HMGB3P22-202ENST00000451823 C1orf229Q6ZS94 237 aaPredicted RBP6.44□□□□□ -1.38
HMGB3P22-202ENST00000451823 RNF135Q8IUD6 432 aa6.44□□□□□ -1.38
HMGB3P22-202ENST00000451823 PGBD3Q8N328 593 aa6.44□□□□□ -1.38
HMGB3P22-202ENST00000451823 OXCT2Q9BYC2 517 aaPredicted RBP6.44□□□□□ -1.38
HMGB3P22-202ENST00000451823 ETNK1Q9HBU6 452 aa6.44□□□□□ -1.38
HMGB3P22-202ENST00000451823 DOLKQ9UPQ8 538 aa6.44□□□□□ -1.38
HMGB3P22-202ENST00000451823 MAP2K3P46734 347 aa6.43□□□□□ -1.38
HMGB3P22-202ENST00000451823 SNRPNP63162 240 aaKnown RBP6.43□□□□□ -1.38
HMGB3P22-202ENST00000451823 FOXK2Q01167 660 aa6.43□□□□□ -1.38
HMGB3P22-202ENST00000451823 UBAP2LQ14157 1087 aaKnown RBP6.43□□□□□ -1.38
HMGB3P22-202ENST00000451823 PODNQ7Z5L7 613 aa6.43□□□□□ -1.38
HMGB3P22-202ENST00000451823 AIDAQ96BJ3 306 aa6.43□□□□□ -1.38
HMGB3P22-202ENST00000451823 DCAF5Q96JK2 942 aa6.43□□□□□ -1.38
HMGB3P22-202ENST00000451823 GDPD2Q9HCC8 539 aa6.43□□□□□ -1.38
HMGB3P22-202ENST00000451823 PHF24Q9UPV7 400 aa6.43□□□□□ -1.38
HMGB3P22-202ENST00000451823 C2CD2LO14523 706 aa6.42□□□□□ -1.38
HMGB3P22-202ENST00000451823 ABL2P42684 1182 aa6.42□□□□□ -1.38
HMGB3P22-202ENST00000451823 CTBSQ01459 385 aa6.42□□□□□ -1.38
HMGB3P22-202ENST00000451823 PLA2G4EQ3MJ16 856 aa6.42□□□□□ -1.38
HMGB3P22-202ENST00000451823 EDARADDQ8WWZ3 215 aa6.42□□□□□ -1.38
HMGB3P22-202ENST00000451823 SIRT1Q96EB6 747 aa6.42□□□□□ -1.38
HMGB3P22-202ENST00000451823 LRRC4BQ9NT99 713 aa6.42□□□□□ -1.38
HMGB3P22-202ENST00000451823 SHISA8B8ZZ34 492 aa6.41□□□□□ -1.38
HMGB3P22-202ENST00000451823 BNIP3LO60238 219 aa6.41□□□□□ -1.38
HMGB3P22-202ENST00000451823 EFHC2Q5JST6 749 aa6.41□□□□□ -1.38
HMGB3P22-202ENST00000451823 RHBDD1Q8TEB9 315 aa6.41□□□□□ -1.38
HMGB3P22-202ENST00000451823 RRAGCQ9HB90 399 aa6.41□□□□□ -1.38
HMGB3P22-202ENST00000451823 ABCC9O60706 1549 aa6.4□□□□□ -1.38
HMGB3P22-202ENST00000451823 MSTNO14793 375 aa6.4□□□□□ -1.38
HMGB3P22-202ENST00000451823 INHAP05111 366 aa6.4□□□□□ -1.38
HMGB3P22-202ENST00000451823 SEMA3FQ13275 785 aa6.4□□□□□ -1.38
HMGB3P22-202ENST00000451823 TLR1Q15399 786 aa6.4□□□□□ -1.38
HMGB3P22-202ENST00000451823 ABHD17AQ96GS6 310 aa6.4□□□□□ -1.38
HMGB3P22-202ENST00000451823 CHIC2Q9UKJ5 165 aa6.4□□□□□ -1.38
HMGB3P22-202ENST00000451823 ITGB2P05107 769 aa6.39□□□□□ -1.39
HMGB3P22-202ENST00000451823 BMP4P12644 408 aa6.39□□□□□ -1.39
HMGB3P22-202ENST00000451823 LBRQ14739 615 aaKnown RBP6.39□□□□□ -1.39
HMGB3P22-202ENST00000451823 ZCCHC2Q9C0B9 1178 aaKnown RBP6.39□□□□□ -1.39
HMGB3P22-202ENST00000451823 SERTAD1Q9UHV2 236 aa6.39□□□□□ -1.39
HMGB3P22-202ENST00000451823 ACIN1Q9UKV3 1341 aaKnown RBP6.39□□□□□ -1.39
HMGB3P22-202ENST00000451823 SCNN1DP51172 638 aa6.38□□□□□ -1.39
HMGB3P22-202ENST00000451823 SMTNP53814 917 aa6.38□□□□□ -1.39
HMGB3P22-202ENST00000451823 GDF10P55107 478 aa6.38□□□□□ -1.39
HMGB3P22-202ENST00000451823 WASHC4Q2M389 1173 aa6.38□□□□□ -1.39
HMGB3P22-202ENST00000451823 MAP7D1Q3KQU3 841 aa6.38□□□□□ -1.39
HMGB3P22-202ENST00000451823 GDF2Q9UK05 429 aaPredicted RBP6.38□□□□□ -1.39
HMGB3P22-202ENST00000451823 ATXN7L1Q9ULK2 861 aaPredicted RBP6.38□□□□□ -1.39
HMGB3P22-202ENST00000451823 PLA2G4AP47712 749 aa6.37□□□□□ -1.39
HMGB3P22-202ENST00000451823 PLPP7Q8NBV4 271 aa6.37□□□□□ -1.39
HMGB3P22-202ENST00000451823 BTBD6Q96KE9 485 aa6.37□□□□□ -1.39
HMGB3P22-202ENST00000451823 SPOCK3Q9BQ16 436 aa6.37□□□□□ -1.39
HMGB3P22-202ENST00000451823 NIFKQ9BYG3 293 aaKnown RBP6.37□□□□□ -1.39
HMGB3P22-202ENST00000451823 CRISPLD1Q9H336 500 aa6.37□□□□□ -1.39
HMGB3P22-202ENST00000451823 NDFIP2Q9NV92 336 aa6.37□□□□□ -1.39
HMGB3P22-202ENST00000451823 GGA1Q9UJY5 639 aa6.37□□□□□ -1.39
HMGB3P22-202ENST00000451823 FGFR3P22607 806 aa6.36□□□□□ -1.39
HMGB3P22-202ENST00000451823 AMPD1P23109 780 aa6.36□□□□□ -1.39
HMGB3P22-202ENST00000451823 ARSJQ5FYB0 599 aaPredicted RBP6.36□□□□□ -1.39
HMGB3P22-202ENST00000451823 LINC00114Q6XXX2 140 aa6.36□□□□□ -1.39
HMGB3P22-202ENST00000451823 TBC1D9Q6ZT07 1266 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms