RNA–Protein interactions for RNA: ENST00000451744.1

LINC00458-203, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best)

Gene LINC00458, Length 1,020 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-203ENST00000451744 KIF13AQ9H1H9 1805 aa10.1□□□□□ -0.79
LINC00458-203ENST00000451744 SUZ12Q15022 739 aaKnown RBP10.09□□□□□ -0.79
LINC00458-203ENST00000451744 LYSMD3Q7Z3D4 306 aa10.09□□□□□ -0.79
LINC00458-203ENST00000451744 KIF21BO75037 1637 aa10.08□□□□□ -0.8
LINC00458-203ENST00000451744 RNF225M0QZC1 329 aaPredicted RBP10.08□□□□□ -0.8
LINC00458-203ENST00000451744 GDF11O95390 407 aa10.08□□□□□ -0.8
LINC00458-203ENST00000451744 BRPF1P55201 1214 aaPredicted RBP10.08□□□□□ -0.8
LINC00458-203ENST00000451744 CUEDC1Q9NWM3 386 aaPredicted RBP10.08□□□□□ -0.8
LINC00458-203ENST00000451744 SEPT12Q8IYM1 358 aa10.07□□□□□ -0.8
LINC00458-203ENST00000451744 PRICKLE2Q7Z3G6 844 aa10.06□□□□□ -0.8
LINC00458-203ENST00000451744 C14orf37Q86TY3 774 aa10.06□□□□□ -0.8
LINC00458-203ENST00000451744 PCDHB9Q9Y5E1 797 aa10.06□□□□□ -0.8
LINC00458-203ENST00000451744 EEA1Q15075 1411 aa10.06□□□□□ -0.8
LINC00458-203ENST00000451744 GIGYF1O75420 1035 aaPredicted RBP10.05□□□□□ -0.8
LINC00458-203ENST00000451744 ARHGEF15O94989 841 aa10.05□□□□□ -0.8
LINC00458-203ENST00000451744 ADAMTS2O95450 1211 aa10.05□□□□□ -0.8
LINC00458-203ENST00000451744 RHOQP17081 205 aa10.05□□□□□ -0.8
LINC00458-203ENST00000451744 ZBBXA8MT70 800 aa10.04□□□□□ -0.8
LINC00458-203ENST00000451744 PCMTD1Q96MG8 357 aaPredicted RBP10.04□□□□□ -0.8
LINC00458-203ENST00000451744 SAMD9Q5K651 1589 aa10.04□□□□□ -0.8
LINC00458-203ENST00000451744 TNIKQ9UKE5 1360 aa10.03□□□□□ -0.8
LINC00458-203ENST00000451744 ATP5J2-PTCD1G3V325 749 aa10.03□□□□□ -0.8
LINC00458-203ENST00000451744 FBXO45P0C2W1 286 aa10.03□□□□□ -0.8
LINC00458-203ENST00000451744 RNF144AP50876 292 aaPredicted RBP10.03□□□□□ -0.8
LINC00458-203ENST00000451744 GAS6Q14393 721 aa10.03□□□□□ -0.8
LINC00458-203ENST00000451744 TMEM259Q4ZIN3 620 aa10.03□□□□□ -0.8
LINC00458-203ENST00000451744 PTPRGP23470 1445 aa10.02□□□□□ -0.81
LINC00458-203ENST00000451744 MEN1O00255 615 aa10.02□□□□□ -0.81
LINC00458-203ENST00000451744 IRS1P35568 1242 aa10.02□□□□□ -0.81
LINC00458-203ENST00000451744 RANGAP1P46060 587 aaPredicted RBP10.02□□□□□ -0.81
LINC00458-203ENST00000451744 GOPCQ9HD26 462 aa10.02□□□□□ -0.81
LINC00458-203ENST00000451744 TSPOAP1O95153 1857 aa10.02□□□□□ -0.81
LINC00458-203ENST00000451744 ABCC2Q92887 1545 aa10.02□□□□□ -0.81
LINC00458-203ENST00000451744 CARMIL2Q6F5E8 1435 aa10.01□□□□□ -0.81
LINC00458-203ENST00000451744 ZCCHC11Q5TAX3 1644 aaKnown RBP10.01□□□□□ -0.81
LINC00458-203ENST00000451744 MARSP56192 900 aaKnown RBP10.01□□□□□ -0.81
LINC00458-203ENST00000451744 LYPD4Q6UWN0 246 aa10.01□□□□□ -0.81
LINC00458-203ENST00000451744 TRIM52Q96A61 297 aa10.01□□□□□ -0.81
LINC00458-203ENST00000451744 GJD4Q96KN9 370 aaPredicted RBP10.01□□□□□ -0.81
LINC00458-203ENST00000451744 PLB1Q6P1J6 1458 aa10.01□□□□□ -0.81
LINC00458-203ENST00000451744 SRSF11Q05519 484 aaKnown RBP10□□□□□ -0.81
LINC00458-203ENST00000451744 NEUROD2Q15784 382 aa10□□□□□ -0.81
LINC00458-203ENST00000451744 ABCA8O94911 1581 aa10□□□□□ -0.81
LINC00458-203ENST00000451744 DIP2BQ9P265 1576 aa10□□□□□ -0.81
LINC00458-203ENST00000451744 A0A1W2PRU2 124 aa9.99□□□□□ -0.81
LINC00458-203ENST00000451744 ZNF837Q96EG3 531 aaPredicted RBP9.99□□□□□ -0.81
LINC00458-203ENST00000451744 FHOD3Q2V2M9 1422 aa9.99□□□□□ -0.81
LINC00458-203ENST00000451744 GOLGA3Q08378 1498 aa9.98□□□□□ -0.81
LINC00458-203ENST00000451744 MAPKBP1O60336 1514 aa9.98□□□□□ -0.81
LINC00458-203ENST00000451744 GPR25O00155 361 aa9.98□□□□□ -0.81
LINC00458-203ENST00000451744 MAP3K10Q02779 954 aa9.98□□□□□ -0.81
LINC00458-203ENST00000451744 RIPOR1Q6ZS17 1223 aa9.98□□□□□ -0.81
LINC00458-203ENST00000451744 UACAQ9BZF9 1416 aa9.98□□□□□ -0.81
LINC00458-203ENST00000451744 CELA2BP08218 269 aaPredicted RBP9.97□□□□□ -0.81
LINC00458-203ENST00000451744 GPC1P35052 558 aa9.97□□□□□ -0.81
LINC00458-203ENST00000451744 ERVK-9P63128 1117 aa9.97□□□□□ -0.81
LINC00458-203ENST00000451744 CC2D2BQ6DHV5 1058 aa9.97□□□□□ -0.81
LINC00458-203ENST00000451744 TRIM22Q8IYM9 498 aa9.97□□□□□ -0.81
LINC00458-203ENST00000451744 IL27Q8NEV9 243 aa9.96□□□□□ -0.82
LINC00458-203ENST00000451744 UHRF1BP1LA0JNW5 1464 aa9.96□□□□□ -0.82
LINC00458-203ENST00000451744 PPRC1Q5VV67 1664 aaKnown RBP9.96□□□□□ -0.82
LINC00458-203ENST00000451744 ARID3CA6NKF2 412 aa9.95□□□□□ -0.82
LINC00458-203ENST00000451744 POU4F2Q12837 409 aa9.95□□□□□ -0.82
LINC00458-203ENST00000451744 DBN1Q16643 649 aa9.95□□□□□ -0.82
LINC00458-203ENST00000451744 SLC27A3Q5K4L6 730 aa9.95□□□□□ -0.82
LINC00458-203ENST00000451744 SCARF2Q96GP6 870 aaPredicted RBP9.95□□□□□ -0.82
LINC00458-203ENST00000451744 NLRP3Q96P20 1036 aa9.95□□□□□ -0.82
LINC00458-203ENST00000451744 MBIPQ9NS73 344 aa9.95□□□□□ -0.82
LINC00458-203ENST00000451744 DNMT3AQ9Y6K1 912 aaPredicted RBP9.95□□□□□ -0.82
LINC00458-203ENST00000451744 LRRIQ1Q96JM4 1722 aa9.94□□□□□ -0.82
LINC00458-203ENST00000451744 RAPGEF6Q8TEU7 1601 aa9.94□□□□□ -0.82
LINC00458-203ENST00000451744 KDM5BQ9UGL1 1544 aa9.94□□□□□ -0.82
LINC00458-203ENST00000451744 SCTRP47872 440 aa9.94□□□□□ -0.82
LINC00458-203ENST00000451744 RNF20Q5VTR2 975 aa9.94□□□□□ -0.82
LINC00458-203ENST00000451744 GPAT2Q6NUI2 795 aa9.94□□□□□ -0.82
LINC00458-203ENST00000451744 KANK3Q6NY19 840 aa9.94□□□□□ -0.82
LINC00458-203ENST00000451744 CCDC125Q86Z20 511 aa9.94□□□□□ -0.82
LINC00458-203ENST00000451744 GMCL1Q96IK5 515 aa9.94□□□□□ -0.82
LINC00458-203ENST00000451744 GAS2L1Q99501 681 aaPredicted RBP9.94□□□□□ -0.82
LINC00458-203ENST00000451744 DYRK1BQ9Y463 629 aa9.94□□□□□ -0.82
LINC00458-203ENST00000451744 ABCC10Q5T3U5 1492 aa9.93□□□□□ -0.82
LINC00458-203ENST00000451744 ASXL2Q76L83 1435 aa9.93□□□□□ -0.82
LINC00458-203ENST00000451744 NR1H3Q13133 447 aa9.93□□□□□ -0.82
LINC00458-203ENST00000451744 FOXR1Q6PIV2 292 aa9.93□□□□□ -0.82
LINC00458-203ENST00000451744 GTPBP3Q969Y2 492 aaKnown RBP9.93□□□□□ -0.82
LINC00458-203ENST00000451744 PCDHB11Q9Y5F2 797 aa9.93□□□□□ -0.82
LINC00458-203ENST00000451744 ARHGAP35Q9NRY4 1499 aa9.92□□□□□ -0.82
LINC00458-203ENST00000451744 CLN3Q13286 438 aa9.92□□□□□ -0.82
LINC00458-203ENST00000451744 CYP2U1Q7Z449 544 aa9.92□□□□□ -0.82
LINC00458-203ENST00000451744 EFCAB5A4FU69 1503 aa9.92□□□□□ -0.82
LINC00458-203ENST00000451744 UBTFP17480 764 aaKnown RBP9.91□□□□□ -0.82
LINC00458-203ENST00000451744 NBPF10Q6P3W6 841 aaKnown RBP9.91□□□□□ -0.82
LINC00458-203ENST00000451744 NBPF15Q8N660 670 aa9.91□□□□□ -0.82
LINC00458-203ENST00000451744 GRIP2Q9C0E4 1043 aa9.91□□□□□ -0.82
LINC00458-203ENST00000451744 ARHGEF10LQ9HCE6 1279 aa9.91□□□□□ -0.82
LINC00458-203ENST00000451744 ENAMQ9NRM1 1142 aa9.91□□□□□ -0.82
LINC00458-203ENST00000451744 H7C1W4 665 aa9.9□□□□□ -0.82
LINC00458-203ENST00000451744 GPR37L1O60883 481 aa9.9□□□□□ -0.82
LINC00458-203ENST00000451744 HOMEZQ8IX15 550 aa9.9□□□□□ -0.82
LINC00458-203ENST00000451744 OSBPL3Q9H4L5 887 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms