RNA–Protein interactions for RNA: ENST00000451579.1

LINC02248-202, Transcript of long intergenic non-protein coding RNA 2248, humanhuman

TSL 3 BASIC

Gene LINC02248, Length 606 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02248-202ENST00000451579 PIGBQ92521 554 aa13.5□□□□□ -0.25
LINC02248-202ENST00000451579 EIF4A2Q14240 407 aaKnown RBP13.49□□□□□ -0.25
LINC02248-202ENST00000451579 ZNF784Q8NCA9 323 aaPredicted RBP13.49□□□□□ -0.25
LINC02248-202ENST00000451579 PANK3Q9H999 370 aa13.49□□□□□ -0.25
LINC02248-202ENST00000451579 TOGARAM1Q9Y4F4 1720 aa13.49□□□□□ -0.25
LINC02248-202ENST00000451579 MAP3K5Q99683 1374 aa13.48□□□□□ -0.25
LINC02248-202ENST00000451579 CLSPNQ9HAW4 1339 aa13.48□□□□□ -0.25
LINC02248-202ENST00000451579 GPR162Q16538 588 aa13.48□□□□□ -0.25
LINC02248-202ENST00000451579 CCER1Q8TC90 406 aaPredicted RBP13.48□□□□□ -0.25
LINC02248-202ENST00000451579 CREBZFQ9NS37 354 aa13.48□□□□□ -0.25
LINC02248-202ENST00000451579 NCAPD2Q15021 1401 aa13.47□□□□□ -0.25
LINC02248-202ENST00000451579 EIF4G2P78344 907 aaKnown RBP eCLIP13.47□□□□□ -0.25
LINC02248-202ENST00000451579 PHF14O94880 888 aa13.46□□□□□ -0.25
LINC02248-202ENST00000451579 ASAP1Q9ULH1 1129 aa13.46□□□□□ -0.25
LINC02248-202ENST00000451579 SPG7Q9UQ90 795 aa13.46□□□□□ -0.25
LINC02248-202ENST00000451579 QSER1Q2KHR3 1735 aa13.46□□□□□ -0.25
LINC02248-202ENST00000451579 PKD1L3Q7Z443 1732 aa13.45□□□□□ -0.26
LINC02248-202ENST00000451579 ANKRD26Q9UPS8 1709 aa13.45□□□□□ -0.26
LINC02248-202ENST00000451579 PHKG2P15735 406 aa13.45□□□□□ -0.26
LINC02248-202ENST00000451579 NKX1-1Q15270 411 aaPredicted RBP13.45□□□□□ -0.26
LINC02248-202ENST00000451579 MAP2P11137 1827 aaKnown RBP13.45□□□□□ -0.26
LINC02248-202ENST00000451579 YBX3P16989 372 aaKnown RBP eCLIP13.44□□□□□ -0.26
LINC02248-202ENST00000451579 ITPK1Q13572 414 aa13.44□□□□□ -0.26
LINC02248-202ENST00000451579 MIER1Q8N108 512 aa13.44□□□□□ -0.26
LINC02248-202ENST00000451579 LINC00116Q8NCU8 138 aa13.44□□□□□ -0.26
LINC02248-202ENST00000451579 WWC3Q9ULE0 1092 aa13.44□□□□□ -0.26
LINC02248-202ENST00000451579 C5P01031 1676 aa13.44□□□□□ -0.26
LINC02248-202ENST00000451579 COL24A1Q17RW2 1714 aa13.43□□□□□ -0.26
LINC02248-202ENST00000451579 AEBP1Q8IUX7 1158 aa13.43□□□□□ -0.26
LINC02248-202ENST00000451579 SMARCC1Q92922 1105 aaPredicted RBP13.43□□□□□ -0.26
LINC02248-202ENST00000451579 AK7Q96M32 723 aa13.43□□□□□ -0.26
LINC02248-202ENST00000451579 TMOD3Q9NYL9 352 aa13.43□□□□□ -0.26
LINC02248-202ENST00000451579 ITGB4P16144 1822 aa13.43□□□□□ -0.26
LINC02248-202ENST00000451579 LOC102724428A0A0B4J2F2 783 aa13.42□□□□□ -0.26
LINC02248-202ENST00000451579 SIK1P57059 783 aa13.42□□□□□ -0.26
LINC02248-202ENST00000451579 IFNL2Q8IZJ0 200 aa13.42□□□□□ -0.26
LINC02248-202ENST00000451579 C4BP0C0L5 1744 aa13.42□□□□□ -0.26
LINC02248-202ENST00000451579 IGSF1Q8N6C5 1336 aa13.41□□□□□ -0.26
LINC02248-202ENST00000451579 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.41□□□□□ -0.26
LINC02248-202ENST00000451579 MORC1Q86VD1 984 aa13.41□□□□□ -0.26
LINC02248-202ENST00000451579 ATG3Q9NT62 314 aa13.41□□□□□ -0.26
LINC02248-202ENST00000451579 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.41□□□□□ -0.26
LINC02248-202ENST00000451579 ATP6V1AP38606 617 aa13.4□□□□□ -0.26
LINC02248-202ENST00000451579 PLCD3Q8N3E9 789 aa13.4□□□□□ -0.26
LINC02248-202ENST00000451579 SLC4A9Q96Q91 983 aa13.4□□□□□ -0.26
LINC02248-202ENST00000451579 TAF1LQ8IZX4 1826 aa13.4□□□□□ -0.26
LINC02248-202ENST00000451579 GOLGB1Q14789 3259 aaKnown RBP13.39□□□□□ -0.27
LINC02248-202ENST00000451579 GNPATO15228 680 aa13.39□□□□□ -0.27
LINC02248-202ENST00000451579 FARP1Q9Y4F1 1045 aaPredicted RBP13.39□□□□□ -0.27
LINC02248-202ENST00000451579 ZNF530Q6P9A1 599 aaPredicted RBP13.38□□□□□ -0.27
LINC02248-202ENST00000451579 FLAD1Q8NFF5 587 aa13.38□□□□□ -0.27
LINC02248-202ENST00000451579 KDM6AO15550 1401 aaPredicted RBP13.38□□□□□ -0.27
LINC02248-202ENST00000451579 VASPP50552 380 aaPredicted RBP13.36□□□□□ -0.27
LINC02248-202ENST00000451579 CNGB1Q14028 1251 aaPredicted RBP13.36□□□□□ -0.27
LINC02248-202ENST00000451579 PLEKHO1Q53GL0 409 aaPredicted RBP13.36□□□□□ -0.27
LINC02248-202ENST00000451579 SULT6B1Q6IMI4 303 aa13.36□□□□□ -0.27
LINC02248-202ENST00000451579 KNSTRNQ9Y448 316 aa13.36□□□□□ -0.27
LINC02248-202ENST00000451579 KIF7Q2M1P5 1343 aa13.36□□□□□ -0.27
LINC02248-202ENST00000451579 UBR3Q6ZT12 1888 aa13.36□□□□□ -0.27
LINC02248-202ENST00000451579 KDRP35968 1356 aa13.35□□□□□ -0.27
LINC02248-202ENST00000451579 CHD4Q14839 1912 aa13.35□□□□□ -0.27
LINC02248-202ENST00000451579 SSFA2P28290 1259 aa13.35□□□□□ -0.27
LINC02248-202ENST00000451579 CD2APQ9Y5K6 639 aa13.35□□□□□ -0.27
LINC02248-202ENST00000451579 ERVV-2B6SEH9 535 aa13.34□□□□□ -0.27
LINC02248-202ENST00000451579 IL13P35225 146 aa13.34□□□□□ -0.27
LINC02248-202ENST00000451579 CABP4P57796 275 aa13.34□□□□□ -0.27
LINC02248-202ENST00000451579 AMER1Q5JTC6 1135 aaPredicted RBP13.34□□□□□ -0.27
LINC02248-202ENST00000451579 DCAF5Q96JK2 942 aa13.34□□□□□ -0.27
LINC02248-202ENST00000451579 GRIN3BO60391 1043 aa13.33□□□□□ -0.28
LINC02248-202ENST00000451579 PTCD1O75127 700 aaKnown RBP13.33□□□□□ -0.28
LINC02248-202ENST00000451579 MMP10P09238 476 aa13.33□□□□□ -0.28
LINC02248-202ENST00000451579 MTHFSP49914 203 aa13.33□□□□□ -0.28
LINC02248-202ENST00000451579 HMOX1P09601 288 aa13.32□□□□□ -0.28
LINC02248-202ENST00000451579 C1QTNF8P60827 252 aa13.32□□□□□ -0.28
LINC02248-202ENST00000451579 AMOTQ4VCS5 1084 aa13.32□□□□□ -0.28
LINC02248-202ENST00000451579 CC2D1BQ5T0F9 858 aaKnown RBP13.32□□□□□ -0.28
LINC02248-202ENST00000451579 NFATC2IPQ8NCF5 419 aa13.32□□□□□ -0.28
LINC02248-202ENST00000451579 SENP3-EIF4A1A0A087X0R7 540 aa13.31□□□□□ -0.28
LINC02248-202ENST00000451579 HAX1O00165 279 aa13.31□□□□□ -0.28
LINC02248-202ENST00000451579 HSP90AB1P08238 724 aaKnown RBP13.31□□□□□ -0.28
LINC02248-202ENST00000451579 C1orf141Q5JVX7 400 aa13.31□□□□□ -0.28
LINC02248-202ENST00000451579 TRAPPC3LQ5T215 181 aa13.31□□□□□ -0.28
LINC02248-202ENST00000451579 ARHGEF1Q92888 912 aaKnown RBP13.31□□□□□ -0.28
LINC02248-202ENST00000451579 RTCBQ9Y3I0 505 aaKnown RBP13.31□□□□□ -0.28
LINC02248-202ENST00000451579 HMGB2P26583 209 aaKnown RBP13.3□□□□□ -0.28
LINC02248-202ENST00000451579 MNX1P50219 401 aaPredicted RBP13.3□□□□□ -0.28
LINC02248-202ENST00000451579 ZNF526Q8TF50 670 aaPredicted RBP13.3□□□□□ -0.28
LINC02248-202ENST00000451579 LGR6Q9HBX8 967 aa13.3□□□□□ -0.28
LINC02248-202ENST00000451579 ATP10DQ9P241 1426 aa13.3□□□□□ -0.28
LINC02248-202ENST00000451579 PER1O15534 1290 aaPredicted RBP13.29□□□□□ -0.28
LINC02248-202ENST00000451579 GIGYF1O75420 1035 aaPredicted RBP13.29□□□□□ -0.28
LINC02248-202ENST00000451579 SRP68Q9UHB9 627 aaKnown RBP13.29□□□□□ -0.28
LINC02248-202ENST00000451579 RPS6KA4O75676 772 aa13.28□□□□□ -0.28
LINC02248-202ENST00000451579 GYS1P13807 737 aa13.28□□□□□ -0.28
LINC02248-202ENST00000451579 CRKLP46109 303 aaKnown RBP13.28□□□□□ -0.28
LINC02248-202ENST00000451579 CNTNAP4Q9C0A0 1308 aa13.28□□□□□ -0.28
LINC02248-202ENST00000451579 PLEKHG2Q9H7P9 1386 aa13.28□□□□□ -0.28
LINC02248-202ENST00000451579 A0A0G2JLW4 131 aa13.27□□□□□ -0.29
LINC02248-202ENST00000451579 SLC39A6Q13433 755 aa13.27□□□□□ -0.29
LINC02248-202ENST00000451579 RC3H1Q5TC82 1133 aaKnown RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms