RNA–Protein interactions for RNA: ENST00000450297.1

SPTLC3-204, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 3

Gene SPTLC3, Length 645 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-204ENST00000450297 AMIGO3Q86WK7 504 aa13.35□□□□□ -0.27
SPTLC3-204ENST00000450297 UTRNP46939 3433 aa13.35□□□□□ -0.27
SPTLC3-204ENST00000450297 SHANK3Q9BYB0 1731 aa13.34□□□□□ -0.27
SPTLC3-204ENST00000450297 SSFA2P28290 1259 aa13.34□□□□□ -0.27
SPTLC3-204ENST00000450297 NKX1-1Q15270 411 aaPredicted RBP13.34□□□□□ -0.27
SPTLC3-204ENST00000450297 LINC00116Q8NCU8 138 aa13.34□□□□□ -0.27
SPTLC3-204ENST00000450297 EYA1Q99502 592 aa13.34□□□□□ -0.27
SPTLC3-204ENST00000450297 ASAP1Q9ULH1 1129 aa13.34□□□□□ -0.27
SPTLC3-204ENST00000450297 IFNL2Q8IZJ0 200 aa13.33□□□□□ -0.28
SPTLC3-204ENST00000450297 WASHC2AQ641Q2 1341 aa13.33□□□□□ -0.28
SPTLC3-204ENST00000450297 C5P01031 1676 aa13.32□□□□□ -0.28
SPTLC3-204ENST00000450297 PHKG2P15735 406 aa13.32□□□□□ -0.28
SPTLC3-204ENST00000450297 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.32□□□□□ -0.284e-8■■□□□ 12
SPTLC3-204ENST00000450297 COL24A1Q17RW2 1714 aa13.32□□□□□ -0.28
SPTLC3-204ENST00000450297 MMP10P09238 476 aa13.31□□□□□ -0.28
SPTLC3-204ENST00000450297 ITPK1Q13572 414 aa13.31□□□□□ -0.28
SPTLC3-204ENST00000450297 POLKQ9UBT6 870 aa13.31□□□□□ -0.28
SPTLC3-204ENST00000450297 TRAPPC3LQ5T215 181 aa13.3□□□□□ -0.28
SPTLC3-204ENST00000450297 ATG3Q9NT62 314 aa13.3□□□□□ -0.28
SPTLC3-204ENST00000450297 RTCBQ9Y3I0 505 aaKnown RBP13.3□□□□□ -0.28
SPTLC3-204ENST00000450297 C4BP0C0L5 1744 aa13.3□□□□□ -0.28
SPTLC3-204ENST00000450297 TRIM26Q12899 539 aaPredicted RBP13.29□□□□□ -0.28
SPTLC3-204ENST00000450297 EIF4A2Q14240 407 aaKnown RBP13.29□□□□□ -0.28
SPTLC3-204ENST00000450297 KIF20BQ96Q89 1820 aa13.28□□□□□ -0.28
SPTLC3-204ENST00000450297 HSPA6P17066 643 aa13.28□□□□□ -0.28
SPTLC3-204ENST00000450297 MKRN4PQ13434 485 aaPredicted RBP13.28□□□□□ -0.28
SPTLC3-204ENST00000450297 NLGN1Q8N2Q7 840 aa13.28□□□□□ -0.28
SPTLC3-204ENST00000450297 BCS1LQ9Y276 419 aa13.28□□□□□ -0.28
SPTLC3-204ENST00000450297 A0A0G2JLW4 131 aa13.27□□□□□ -0.29
SPTLC3-204ENST00000450297 HSP90AB1P08238 724 aaKnown RBP13.27□□□□□ -0.29
SPTLC3-204ENST00000450297 RFC4P35249 363 aa13.27□□□□□ -0.29
SPTLC3-204ENST00000450297 CABP4P57796 275 aa13.27□□□□□ -0.29
SPTLC3-204ENST00000450297 PLEKHO1Q53GL0 409 aaPredicted RBP13.27□□□□□ -0.29
SPTLC3-204ENST00000450297 IFFO2Q5TF58 517 aa13.27□□□□□ -0.29
SPTLC3-204ENST00000450297 ARHGAP27Q6ZUM4 889 aa13.27□□□□□ -0.29
SPTLC3-204ENST00000450297 ADCY9O60503 1353 aa13.26□□□□□ -0.29
SPTLC3-204ENST00000450297 ZNF530Q6P9A1 599 aaPredicted RBP13.26□□□□□ -0.29
SPTLC3-204ENST00000450297 TOGARAM1Q9Y4F4 1720 aa13.25□□□□□ -0.29
SPTLC3-204ENST00000450297 NCAPD2Q15021 1401 aa13.25□□□□□ -0.29
SPTLC3-204ENST00000450297 ERVV-2B6SEH9 535 aa13.25□□□□□ -0.29
SPTLC3-204ENST00000450297 C1orf141Q5JVX7 400 aa13.25□□□□□ -0.29
SPTLC3-204ENST00000450297 CHRDL2Q6WN34 429 aa13.25□□□□□ -0.29
SPTLC3-204ENST00000450297 ARHGEF1Q92888 912 aaKnown RBP13.25□□□□□ -0.29
SPTLC3-204ENST00000450297 DCAF5Q96JK2 942 aa13.25□□□□□ -0.29
SPTLC3-204ENST00000450297 PCGF6Q9BYE7 350 aa13.25□□□□□ -0.29
SPTLC3-204ENST00000450297 CCDC87Q9NVE4 849 aa13.25□□□□□ -0.29
SPTLC3-204ENST00000450297 PARP3Q9Y6F1 533 aa13.25□□□□□ -0.29
SPTLC3-204ENST00000450297 PTCD1O75127 700 aaKnown RBP13.24□□□□□ -0.29
SPTLC3-204ENST00000450297 FCHSD2O94868 740 aa13.24□□□□□ -0.29
SPTLC3-204ENST00000450297 MTHFSP49914 203 aa13.24□□□□□ -0.29
SPTLC3-204ENST00000450297 TGFB2P61812 414 aa13.24□□□□□ -0.29
SPTLC3-204ENST00000450297 PKD1L3Q7Z443 1732 aa13.24□□□□□ -0.29
SPTLC3-204ENST00000450297 DPEP1P16444 411 aa13.23□□□□□ -0.29
SPTLC3-204ENST00000450297 AMOTQ4VCS5 1084 aa13.23□□□□□ -0.29
SPTLC3-204ENST00000450297 REM2Q8IYK8 340 aaPredicted RBP13.23□□□□□ -0.29
SPTLC3-204ENST00000450297 TIMELESSQ9UNS1 1208 aa13.23□□□□□ -0.29
SPTLC3-204ENST00000450297 GOLGB1Q14789 3259 aaKnown RBP13.23□□□□□ -0.29
SPTLC3-204ENST00000450297 TAF1LQ8IZX4 1826 aa13.23□□□□□ -0.29
SPTLC3-204ENST00000450297 KIF3CO14782 793 aa13.22□□□□□ -0.29
SPTLC3-204ENST00000450297 RPS6KA4O75676 772 aa13.22□□□□□ -0.29
SPTLC3-204ENST00000450297 RC3H1Q5TC82 1133 aaKnown RBP13.22□□□□□ -0.29
SPTLC3-204ENST00000450297 MORC1Q86VD1 984 aa13.22□□□□□ -0.29
SPTLC3-204ENST00000450297 SLC4A9Q96Q91 983 aa13.22□□□□□ -0.29
SPTLC3-204ENST00000450297 PANK3Q9H999 370 aa13.22□□□□□ -0.29
SPTLC3-204ENST00000450297 ITGB4P16144 1822 aa13.22□□□□□ -0.29
SPTLC3-204ENST00000450297 CNTNAP4Q9C0A0 1308 aa13.21□□□□□ -0.29
SPTLC3-204ENST00000450297 GYS1P13807 737 aa13.21□□□□□ -0.29
SPTLC3-204ENST00000450297 PXDNLA1KZ92 1463 aa13.21□□□□□ -0.3
SPTLC3-204ENST00000450297 EIF4G2P78344 907 aaKnown RBP eCLIP13.2□□□□□ -0.3
SPTLC3-204ENST00000450297 AEBP1Q8IUX7 1158 aa13.2□□□□□ -0.3
SPTLC3-204ENST00000450297 C16orf71Q8IYS4 520 aaPredicted RBP13.2□□□□□ -0.3
SPTLC3-204ENST00000450297 NFATC2IPQ8NCF5 419 aa13.2□□□□□ -0.3
SPTLC3-204ENST00000450297 UBR3Q6ZT12 1888 aa13.2□□□□□ -0.3
SPTLC3-204ENST00000450297 KDRP35968 1356 aa13.2□□□□□ -0.3
SPTLC3-204ENST00000450297 SPDYE2BA6NHP3 402 aa13.19□□□□□ -0.3
SPTLC3-204ENST00000450297 SPDYE6P0CI01 402 aa13.19□□□□□ -0.3
SPTLC3-204ENST00000450297 CRKLP46109 303 aaKnown RBP13.19□□□□□ -0.3
SPTLC3-204ENST00000450297 APLP1P51693 650 aa13.19□□□□□ -0.3
SPTLC3-204ENST00000450297 SPDYE2Q495Y8 402 aa13.19□□□□□ -0.3
SPTLC3-204ENST00000450297 SULT6B1Q6IMI4 303 aa13.19□□□□□ -0.3
SPTLC3-204ENST00000450297 SRP68Q9UHB9 627 aaKnown RBP13.19□□□□□ -0.3
SPTLC3-204ENST00000450297 CICQ96RK0 1608 aaPredicted RBP13.19□□□□□ -0.3
SPTLC3-204ENST00000450297 TOMM70O94826 608 aa13.18□□□□□ -0.3
SPTLC3-204ENST00000450297 HSPA5P11021 654 aaKnown RBP13.18□□□□□ -0.3
SPTLC3-204ENST00000450297 C9orf131Q5VYM1 1079 aa13.18□□□□□ -0.3
SPTLC3-204ENST00000450297 NMRK2Q9NPI5 230 aa13.18□□□□□ -0.3
SPTLC3-204ENST00000450297 PIM2Q9P1W9 311 aa13.18□□□□□ -0.3
SPTLC3-204ENST00000450297 C10orf71Q711Q0 1435 aa13.18□□□□□ -0.3
SPTLC3-204ENST00000450297 FKBP8Q14318 412 aa13.17□□□□□ -0.3
SPTLC3-204ENST00000450297 DALRD3Q5D0E6 543 aaKnown RBP13.17□□□□□ -0.3
SPTLC3-204ENST00000450297 KNSTRNQ9Y448 316 aa13.17□□□□□ -0.3
SPTLC3-204ENST00000450297 MAP2P11137 1827 aaKnown RBP13.17□□□□□ -0.3
SPTLC3-204ENST00000450297 PLEKHG2Q9H7P9 1386 aa13.17□□□□□ -0.3
SPTLC3-204ENST00000450297 KDM6AO15550 1401 aaPredicted RBP13.16□□□□□ -0.3
SPTLC3-204ENST00000450297 ZPR1O75312 459 aa13.16□□□□□ -0.3
SPTLC3-204ENST00000450297 CHRNA5P30532 468 aa13.15□□□□□ -0.3
SPTLC3-204ENST00000450297 RNF181Q9P0P0 153 aa13.15□□□□□ -0.3
SPTLC3-204ENST00000450297 ANKRD26Q9UPS8 1709 aa13.15□□□□□ -0.3
SPTLC3-204ENST00000450297 USP42Q9H9J4 1324 aaKnown RBP13.14□□□□□ -0.31
SPTLC3-204ENST00000450297 DDR1Q08345 913 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms