RNA–Protein interactions for RNA: ENST00000446225.5

MCF2-206, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene MCF2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-206ENST00000446225 XPCQ01831 940 aaPredicted RBP8.75□□□□□ -1.01
MCF2-206ENST00000446225 ARSIQ5FYB1 569 aa8.75□□□□□ -1.01
MCF2-206ENST00000446225 TGIF2Q9GZN2 237 aa8.75□□□□□ -1.01
MCF2-206ENST00000446225 KIF14Q15058 1648 aa8.75□□□□□ -1.01
MCF2-206ENST00000446225 ZBTB7BO15156 539 aaPredicted RBP8.74□□□□□ -1.01
MCF2-206ENST00000446225 LGR5O75473 907 aa8.74□□□□□ -1.01
MCF2-206ENST00000446225 CFHP08603 1231 aa8.74□□□□□ -1.01
MCF2-206ENST00000446225 TMC7Q7Z402 723 aa8.74□□□□□ -1.01
MCF2-206ENST00000446225 SLC43A3Q8NBI5 491 aa8.74□□□□□ -1.01
MCF2-206ENST00000446225 TEX14Q8IWB6 1497 aa8.74□□□□□ -1.01
MCF2-206ENST00000446225 COL17A1Q9UMD9 1497 aaPredicted RBP8.74□□□□□ -1.01
MCF2-206ENST00000446225 CFAP43Q8NDM7 1665 aa8.74□□□□□ -1.01
MCF2-206ENST00000446225 PLCH2O75038 1416 aa8.74□□□□□ -1.01
MCF2-206ENST00000446225 TTC37Q6PGP7 1564 aa8.74□□□□□ -1.01
MCF2-206ENST00000446225 TSGA10IPQ3SY00 556 aa8.74□□□□□ -1.01
MCF2-206ENST00000446225 EFCAB2Q5VUJ9 269 aa8.74□□□□□ -1.01
MCF2-206ENST00000446225 CCDC102BQ68D86 513 aa8.74□□□□□ -1.01
MCF2-206ENST00000446225 MICAL1Q8TDZ2 1067 aa8.74□□□□□ -1.01
MCF2-206ENST00000446225 NLRP2Q9NX02 1062 aa8.74□□□□□ -1.01
MCF2-206ENST00000446225 MAP10Q9P2G4 905 aa8.74□□□□□ -1.01
MCF2-206ENST00000446225 SFI1A8K8P3 1242 aa8.73□□□□□ -1.01
MCF2-206ENST00000446225 SLC4A3P48751 1232 aa8.73□□□□□ -1.01
MCF2-206ENST00000446225 MCCD1P59942 119 aaPredicted RBP8.73□□□□□ -1.01
MCF2-206ENST00000446225 FANCCQ00597 558 aa8.73□□□□□ -1.01
MCF2-206ENST00000446225 CAPN12Q6ZSI9 719 aa8.73□□□□□ -1.01
MCF2-206ENST00000446225 HINFPQ9BQA5 517 aa8.73□□□□□ -1.01
MCF2-206ENST00000446225 TIAM1Q13009 1591 aa8.73□□□□□ -1.01
MCF2-206ENST00000446225 RAB11FIP3O75154 756 aa8.72□□□□□ -1.01
MCF2-206ENST00000446225 F12P00748 615 aaPredicted RBP8.72□□□□□ -1.01
MCF2-206ENST00000446225 GTF2IP78347 998 aa8.72□□□□□ -1.01
MCF2-206ENST00000446225 TPCN2Q8NHX9 752 aa8.72□□□□□ -1.01
MCF2-206ENST00000446225 RNF34Q969K3 372 aa8.72□□□□□ -1.01
MCF2-206ENST00000446225 ARMC5Q96C12 935 aa8.72□□□□□ -1.01
MCF2-206ENST00000446225 PARP2Q9UGN5 583 aa8.72□□□□□ -1.01
MCF2-206ENST00000446225 LRRC9Q6ZRR7 1453 aa8.72□□□□□ -1.01
MCF2-206ENST00000446225 RAPGEF3O95398 923 aa8.72□□□□□ -1.01
MCF2-206ENST00000446225 SDE2Q6IQ49 451 aa8.72□□□□□ -1.01
MCF2-206ENST00000446225 RBCK1Q9BYM8 510 aa8.72□□□□□ -1.01
MCF2-206ENST00000446225 METTL5Q9NRN9 209 aaKnown RBP8.72□□□□□ -1.01
MCF2-206ENST00000446225 GPSM3Q9Y4H4 160 aa8.72□□□□□ -1.01
MCF2-206ENST00000446225 MAP3K1Q13233 1512 aa8.72□□□□□ -1.01
MCF2-206ENST00000446225 CCNB3Q8WWL7 1395 aa8.72□□□□□ -1.01
MCF2-206ENST00000446225 AKNAQ7Z591 1439 aa8.71□□□□□ -1.01
MCF2-206ENST00000446225 POTEFA5A3E0 1075 aa8.71□□□□□ -1.02
MCF2-206ENST00000446225 TREHO43280 583 aa8.71□□□□□ -1.02
MCF2-206ENST00000446225 DNAJA1P31689 397 aaKnown RBP8.71□□□□□ -1.02
MCF2-206ENST00000446225 HDGFP51858 240 aaKnown RBP8.71□□□□□ -1.02
MCF2-206ENST00000446225 PTK2Q05397 1052 aa8.71□□□□□ -1.02
MCF2-206ENST00000446225 GNL2Q13823 731 aaKnown RBP8.71□□□□□ -1.02
MCF2-206ENST00000446225 PPARGC1BQ86YN6 1023 aaKnown RBP8.71□□□□□ -1.02
MCF2-206ENST00000446225 ACBD3Q9H3P7 528 aa8.71□□□□□ -1.02
MCF2-206ENST00000446225 LHX6Q9UPM6 363 aa8.71□□□□□ -1.02
MCF2-206ENST00000446225 PHLDB1Q86UU1 1377 aa8.71□□□□□ -1.02
MCF2-206ENST00000446225 FANCAO15360 1455 aa8.71□□□□□ -1.02
MCF2-206ENST00000446225 GPATCH8Q9UKJ3 1502 aaKnown RBP8.71□□□□□ -1.02
MCF2-206ENST00000446225 SORBS3O60504 671 aa8.7□□□□□ -1.02
MCF2-206ENST00000446225 FMR1Q06787 632 aaKnown RBP eCLIP8.7□□□□□ -1.02
MCF2-206ENST00000446225 Q3C1V9 767 aa8.7□□□□□ -1.02
MCF2-206ENST00000446225 EGFLAMQ63HQ2 1017 aa8.7□□□□□ -1.02
MCF2-206ENST00000446225 PMFBP1Q8TBY8 1022 aa8.7□□□□□ -1.02
MCF2-206ENST00000446225 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.7□□□□□ -1.02
MCF2-206ENST00000446225 KIAA1468Q9P260 1216 aa8.7□□□□□ -1.02
MCF2-206ENST00000446225 CFDP1Q9UEE9 299 aaPredicted RBP8.7□□□□□ -1.02
MCF2-206ENST00000446225 DOLKQ9UPQ8 538 aa8.7□□□□□ -1.02
MCF2-206ENST00000446225 NEO1Q92859 1461 aa8.7□□□□□ -1.02
MCF2-206ENST00000446225 PTCD1O75127 700 aaKnown RBP8.7□□□□□ -1.02
MCF2-206ENST00000446225 LDHBP07195 334 aaKnown RBP8.7□□□□□ -1.02
MCF2-206ENST00000446225 ITGAEP38570 1179 aa8.7□□□□□ -1.02
MCF2-206ENST00000446225 PSME1Q06323 249 aa8.7□□□□□ -1.02
MCF2-206ENST00000446225 FKBP5Q13451 457 aaPredicted RBP8.7□□□□□ -1.02
MCF2-206ENST00000446225 OXLD1Q5BKU9 147 aa8.7□□□□□ -1.02
MCF2-206ENST00000446225 EHBP1L1Q8N3D4 1523 aa8.69□□□□□ -1.02
MCF2-206ENST00000446225 NCOA2Q15596 1464 aa8.69□□□□□ -1.02
MCF2-206ENST00000446225 TNNI2P48788 182 aa8.69□□□□□ -1.02
MCF2-206ENST00000446225 FGD1P98174 961 aa8.69□□□□□ -1.02
MCF2-206ENST00000446225 GPATCH3Q96I76 525 aa8.69□□□□□ -1.02
MCF2-206ENST00000446225 DUSP9Q99956 384 aaKnown RBP8.69□□□□□ -1.02
MCF2-206ENST00000446225 OCSTAMPQ9BR26 566 aa8.69□□□□□ -1.02
MCF2-206ENST00000446225 ZSWIM4Q9H7M6 989 aa8.69□□□□□ -1.02
MCF2-206ENST00000446225 VTI1BQ9UEU0 232 aa8.69□□□□□ -1.02
MCF2-206ENST00000446225 SLC27A5Q9Y2P5 690 aa8.69□□□□□ -1.02
MCF2-206ENST00000446225 TBX22Q9Y458 520 aa8.69□□□□□ -1.02
MCF2-206ENST00000446225 KDM6BO15054 1643 aa8.69□□□□□ -1.02
MCF2-206ENST00000446225 ARAP3Q8WWN8 1544 aa8.69□□□□□ -1.02
MCF2-206ENST00000446225 ZNF644Q9H582 1327 aaPredicted RBP8.69□□□□□ -1.02
MCF2-206ENST00000446225 PRPF40AO75400 957 aaKnown RBP8.68□□□□□ -1.02
MCF2-206ENST00000446225 ZNF76P36508 570 aa8.68□□□□□ -1.02
MCF2-206ENST00000446225 MAPK8P45983 427 aa8.68□□□□□ -1.02
MCF2-206ENST00000446225 TMC4Q7Z404 712 aa8.68□□□□□ -1.02
MCF2-206ENST00000446225 HELQQ8TDG4 1101 aa8.68□□□□□ -1.02
MCF2-206ENST00000446225 TMC1Q8TDI8 760 aa8.68□□□□□ -1.02
MCF2-206ENST00000446225 PIF1Q9H611 641 aa8.68□□□□□ -1.02
MCF2-206ENST00000446225 ARHGAP5Q13017 1502 aa8.68□□□□□ -1.02
MCF2-206ENST00000446225 SCAPERQ9BY12 1400 aa8.68□□□□□ -1.02
MCF2-206ENST00000446225 PSDA5PKW4 1024 aaPredicted RBP8.68□□□□□ -1.02
MCF2-206ENST00000446225 NDUFB5O43674 189 aa8.68□□□□□ -1.02
MCF2-206ENST00000446225 FAM13AO94988 1023 aa8.68□□□□□ -1.02
MCF2-206ENST00000446225 WEE1P30291 646 aa8.68□□□□□ -1.02
MCF2-206ENST00000446225 HNRNPMP52272 730 aaKnown RBP eCLIP8.68□□□□□ -1.02
MCF2-206ENST00000446225 NAA30Q147X3 362 aaPredicted RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms