RNA–Protein interactions for RNA: ENST00000441867.5

ABCF1-203, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 5

Gene ABCF1, Length 1,074 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-203ENST00000441867 PIGBQ92521 554 aa12.95□□□□□ -0.34
ABCF1-203ENST00000441867 PXDNLA1KZ92 1463 aa12.94□□□□□ -0.34
ABCF1-203ENST00000441867 A0A0G2JLW4 131 aa12.94□□□□□ -0.34
ABCF1-203ENST00000441867 FCHSD2O94868 740 aa12.94□□□□□ -0.34
ABCF1-203ENST00000441867 FBLN1P23142 703 aa12.94□□□□□ -0.34
ABCF1-203ENST00000441867 LINC00116Q8NCU8 138 aa12.94□□□□□ -0.34
ABCF1-203ENST00000441867 C4BP0C0L5 1744 aa12.93□□□□□ -0.34
ABCF1-203ENST00000441867 TMF1P82094 1093 aa12.93□□□□□ -0.34
ABCF1-203ENST00000441867 RRS1Q15050 365 aaKnown RBP12.93□□□□□ -0.34
ABCF1-203ENST00000441867 NKX1-1Q15270 411 aaPredicted RBP12.93□□□□□ -0.34
ABCF1-203ENST00000441867 C9orf131Q5VYM1 1079 aa12.93□□□□□ -0.34
ABCF1-203ENST00000441867 SMIM5Q71RC9 77 aa12.93□□□□□ -0.34
ABCF1-203ENST00000441867 CCDC87Q9NVE4 849 aa12.93□□□□□ -0.34
ABCF1-203ENST00000441867 SPG7Q9UQ90 795 aa12.93□□□□□ -0.34
ABCF1-203ENST00000441867 INSRP06213 1382 aa12.93□□□□□ -0.34
ABCF1-203ENST00000441867 ZEB1P37275 1124 aaPredicted RBP12.92□□□□□ -0.34
ABCF1-203ENST00000441867 ATP6V1AP38606 617 aa12.92□□□□□ -0.34
ABCF1-203ENST00000441867 NEUROD1Q13562 356 aa12.92□□□□□ -0.34
ABCF1-203ENST00000441867 TRAPPC3LQ5T215 181 aa12.92□□□□□ -0.34
ABCF1-203ENST00000441867 SIN3AQ96ST3 1273 aa12.92□□□□□ -0.34
ABCF1-203ENST00000441867 TMOD3Q9NYL9 352 aa12.92□□□□□ -0.34
ABCF1-203ENST00000441867 KIF24Q5T7B8 1368 aa12.92□□□□□ -0.34
ABCF1-203ENST00000441867 DPEP1P16444 411 aa12.91□□□□□ -0.34
ABCF1-203ENST00000441867 SMC1BQ8NDV3 1235 aa12.91□□□□□ -0.34
ABCF1-203ENST00000441867 RTCBQ9Y3I0 505 aaKnown RBP12.91□□□□□ -0.34
ABCF1-203ENST00000441867 C10orf71Q711Q0 1435 aa12.9□□□□□ -0.34
ABCF1-203ENST00000441867 ITPK1Q13572 414 aa12.9□□□□□ -0.34
ABCF1-203ENST00000441867 HSP90AB2PQ58FF8 381 aa12.9□□□□□ -0.34
ABCF1-203ENST00000441867 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.9□□□□□ -0.341e-6■■■■■ 32.7
ABCF1-203ENST00000441867 PIM2Q9P1W9 311 aa12.9□□□□□ -0.34
ABCF1-203ENST00000441867 PARP3Q9Y6F1 533 aa12.9□□□□□ -0.34
ABCF1-203ENST00000441867 FLT4P35916 1363 aa12.9□□□□□ -0.34
ABCF1-203ENST00000441867 FYB1O15117 783 aa12.89□□□□□ -0.35
ABCF1-203ENST00000441867 RRAGCQ9HB90 399 aa12.89□□□□□ -0.35
ABCF1-203ENST00000441867 RFC4P35249 363 aa12.88□□□□□ -0.35
ABCF1-203ENST00000441867 DALRD3Q5D0E6 543 aaKnown RBP12.88□□□□□ -0.35
ABCF1-203ENST00000441867 RC3H1Q5TC82 1133 aaKnown RBP12.88□□□□□ -0.35
ABCF1-203ENST00000441867 GGNBP2Q9H3C7 697 aa12.88□□□□□ -0.35
ABCF1-203ENST00000441867 RNF181Q9P0P0 153 aa12.88□□□□□ -0.35
ABCF1-203ENST00000441867 ASAP1Q9ULH1 1129 aa12.88□□□□□ -0.35
ABCF1-203ENST00000441867 TAF1LQ8IZX4 1826 aa12.88□□□□□ -0.35
ABCF1-203ENST00000441867 DCAF5Q96JK2 942 aa12.87□□□□□ -0.35
ABCF1-203ENST00000441867 TOGARAM1Q9Y4F4 1720 aa12.87□□□□□ -0.35
ABCF1-203ENST00000441867 UBR3Q6ZT12 1888 aa12.87□□□□□ -0.35
ABCF1-203ENST00000441867 ZC3H4Q9UPT8 1303 aaKnown RBP12.87□□□□□ -0.35
ABCF1-203ENST00000441867 GYS1P13807 737 aa12.86□□□□□ -0.35
ABCF1-203ENST00000441867 KCNA3P22001 575 aa12.86□□□□□ -0.35
ABCF1-203ENST00000441867 IFNL2Q8IZJ0 200 aa12.86□□□□□ -0.35
ABCF1-203ENST00000441867 ARHGEF1Q92888 912 aaKnown RBP12.86□□□□□ -0.35
ABCF1-203ENST00000441867 ATG3Q9NT62 314 aa12.86□□□□□ -0.35
ABCF1-203ENST00000441867 RPS6KA4O75676 772 aa12.85□□□□□ -0.35
ABCF1-203ENST00000441867 FAM161AQ3B820 660 aa12.85□□□□□ -0.35
ABCF1-203ENST00000441867 TESK2Q96S53 571 aa12.85□□□□□ -0.35
ABCF1-203ENST00000441867 KCPQ6ZWJ8 1503 aa12.84□□□□□ -0.35
ABCF1-203ENST00000441867 VEGFAP15692 232 aaPredicted RBP12.84□□□□□ -0.35
ABCF1-203ENST00000441867 TIMELESSQ9UNS1 1208 aa12.84□□□□□ -0.35
ABCF1-203ENST00000441867 CNTNAP4Q9C0A0 1308 aa12.84□□□□□ -0.35
ABCF1-203ENST00000441867 ST20-MTHFSA0A0A6YYL1 179 aa12.83□□□□□ -0.36
ABCF1-203ENST00000441867 PHKG2P15735 406 aa12.83□□□□□ -0.36
ABCF1-203ENST00000441867 RGPD2P0DJD1 1756 aa12.83□□□□□ -0.36
ABCF1-203ENST00000441867 TONSLQ96HA7 1378 aa12.82□□□□□ -0.36
ABCF1-203ENST00000441867 NCAPD2Q15021 1401 aa12.82□□□□□ -0.36
ABCF1-203ENST00000441867 ERVV-2B6SEH9 535 aa12.82□□□□□ -0.36
ABCF1-203ENST00000441867 RBM42Q9BTD8 480 aaKnown RBP12.82□□□□□ -0.36
ABCF1-203ENST00000441867 KIF13BQ9NQT8 1826 aa12.82□□□□□ -0.36
ABCF1-203ENST00000441867 MAP2P11137 1827 aaKnown RBP12.81□□□□□ -0.36
ABCF1-203ENST00000441867 KDRP35968 1356 aa12.81□□□□□ -0.36
ABCF1-203ENST00000441867 GLTPD2A6NH11 291 aa12.8□□□□□ -0.36
ABCF1-203ENST00000441867 HSP90AB1P08238 724 aaKnown RBP12.8□□□□□ -0.36
ABCF1-203ENST00000441867 LMNB1P20700 586 aa12.8□□□□□ -0.36
ABCF1-203ENST00000441867 EMILIN1Q9Y6C2 1016 aa12.8□□□□□ -0.36
ABCF1-203ENST00000441867 WASHC2AQ641Q2 1341 aa12.8□□□□□ -0.36
ABCF1-203ENST00000441867 KIAA1551Q9HCM1 1747 aa12.79□□□□□ -0.36
ABCF1-203ENST00000441867 PPM1GO15355 546 aaPredicted RBP12.79□□□□□ -0.36
ABCF1-203ENST00000441867 CDCA8Q53HL2 280 aa12.79□□□□□ -0.36
ABCF1-203ENST00000441867 SLC4A9Q96Q91 983 aa12.79□□□□□ -0.36
ABCF1-203ENST00000441867 EYA1Q99502 592 aa12.79□□□□□ -0.36
ABCF1-203ENST00000441867 C4AP0C0L4 1744 aa12.79□□□□□ -0.36
ABCF1-203ENST00000441867 ITGB4P16144 1822 aa12.78□□□□□ -0.36
ABCF1-203ENST00000441867 CHRNA5P30532 468 aa12.78□□□□□ -0.36
ABCF1-203ENST00000441867 PKD1L3Q7Z443 1732 aa12.78□□□□□ -0.36
ABCF1-203ENST00000441867 N4BP2Q86UW6 1770 aaPredicted RBP12.78□□□□□ -0.36
ABCF1-203ENST00000441867 FOXN1O15353 648 aa12.77□□□□□ -0.37
ABCF1-203ENST00000441867 FKBP8Q14318 412 aa12.77□□□□□ -0.37
ABCF1-203ENST00000441867 USP42Q9H9J4 1324 aaKnown RBP12.77□□□□□ -0.37
ABCF1-203ENST00000441867 DDR1Q08345 913 aa12.76□□□□□ -0.37
ABCF1-203ENST00000441867 DPY19L2Q6NUT2 758 aa12.76□□□□□ -0.37
ABCF1-203ENST00000441867 KDM6AO15550 1401 aaPredicted RBP12.76□□□□□ -0.37
ABCF1-203ENST00000441867 TNRC6CQ9HCJ0 1690 aaKnown RBP12.76□□□□□ -0.37
ABCF1-203ENST00000441867 TM4SF1P30408 202 aa12.75□□□□□ -0.37
ABCF1-203ENST00000441867 CRKLP46109 303 aaKnown RBP12.75□□□□□ -0.37
ABCF1-203ENST00000441867 CABP4P57796 275 aa12.75□□□□□ -0.37
ABCF1-203ENST00000441867 PRDM10Q9NQV6 1147 aa12.75□□□□□ -0.37
ABCF1-203ENST00000441867 CREBZFQ9NS37 354 aa12.75□□□□□ -0.37
ABCF1-203ENST00000441867 SRP68Q9UHB9 627 aaKnown RBP12.75□□□□□ -0.37
ABCF1-203ENST00000441867 POLRMTO00411 1230 aaKnown RBP12.74□□□□□ -0.37
ABCF1-203ENST00000441867 ZPR1O75312 459 aa12.74□□□□□ -0.37
ABCF1-203ENST00000441867 SLC4A2P04920 1241 aa12.74□□□□□ -0.37
ABCF1-203ENST00000441867 RASSF7Q02833 373 aa12.74□□□□□ -0.37
ABCF1-203ENST00000441867 MLLT1Q03111 559 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms