RNA–Protein interactions for RNA: ENST00000440612.5

CGREF1-207, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 3

Gene CGREF1, Length 1,695 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-207ENST00000440612 SLC52A2Q9HAB3 445 aa35.98■■■■□ 3.35
CGREF1-207ENST00000440612 SMC4Q9NTJ3 1288 aa35.97■■■■□ 3.35
CGREF1-207ENST00000440612 KCNQ3O43525 872 aa35.97■■■■□ 3.35
CGREF1-207ENST00000440612 BRPF1P55201 1214 aaPredicted RBP35.97■■■■□ 3.35
CGREF1-207ENST00000440612 BTBD11A6QL63 1104 aa35.96■■■■□ 3.35
CGREF1-207ENST00000440612 VPS72Q15906 364 aa35.96■■■■□ 3.35
CGREF1-207ENST00000440612 DDX54Q8TDD1 881 aaKnown RBP35.95■■■■□ 3.35
CGREF1-207ENST00000440612 BARGINQ6ZT62 677 aa35.94■■■■□ 3.34
CGREF1-207ENST00000440612 EIF4A1P60842 406 aaKnown RBP35.94■■■■□ 3.34
CGREF1-207ENST00000440612 CDCA7Q9BWT1 371 aaPredicted RBP35.94■■■■□ 3.34
CGREF1-207ENST00000440612 TNKS1BP1Q9C0C2 1729 aaKnown RBP35.93■■■■□ 3.34
CGREF1-207ENST00000440612 MRPL50Q8N5N7 158 aaKnown RBP35.93■■■■□ 3.34
CGREF1-207ENST00000440612 NFATC2IPQ8NCF5 419 aa35.93■■■■□ 3.34
CGREF1-207ENST00000440612 TNS2Q63HR2 1409 aa35.92■■■■□ 3.34
CGREF1-207ENST00000440612 FRAT1Q92837 279 aaPredicted RBP35.91■■■■□ 3.34
CGREF1-207ENST00000440612 USP21Q9UK80 565 aa35.91■■■■□ 3.34
CGREF1-207ENST00000440612 HEG1Q9ULI3 1381 aa35.89■■■■□ 3.34
CGREF1-207ENST00000440612 EXOC6Q8TAG9 804 aa35.89■■■■□ 3.34
CGREF1-207ENST00000440612 TNNQ9UQP3 1299 aa35.89■■■■□ 3.34
CGREF1-207ENST00000440612 PDE3AQ14432 1141 aa35.88■■■■□ 3.33
CGREF1-207ENST00000440612 SOS1Q07889 1333 aaPredicted RBP35.88■■■■□ 3.33
CGREF1-207ENST00000440612 EXOC5O00471 708 aa35.88■■■■□ 3.33
CGREF1-207ENST00000440612 TCERG1O14776 1098 aaKnown RBP35.88■■■■□ 3.33
CGREF1-207ENST00000440612 CRBNQ96SW2 442 aa35.88■■■■□ 3.33
CGREF1-207ENST00000440612 TOGARAM1Q9Y4F4 1720 aa35.87■■■■□ 3.33
CGREF1-207ENST00000440612 ERVV-2B6SEH9 535 aa35.87■■■■□ 3.33
CGREF1-207ENST00000440612 CCDC9Q9Y3X0 531 aaKnown RBP35.87■■■■□ 3.33
CGREF1-207ENST00000440612 MEX3CQ5U5Q3 659 aaKnown RBP35.86■■■■□ 3.33
CGREF1-207ENST00000440612 NOB1Q9ULX3 412 aaKnown RBP35.86■■■■□ 3.33
CGREF1-207ENST00000440612 KIF16BQ96L93 1317 aa35.84■■■■□ 3.33
CGREF1-207ENST00000440612 CABP4P57796 275 aa35.84■■■■□ 3.33
CGREF1-207ENST00000440612 ZKSCAN2Q63HK3 967 aa35.84■■■■□ 3.33
CGREF1-207ENST00000440612 ZNF790Q6PG37 636 aa35.84■■■■□ 3.33
CGREF1-207ENST00000440612 AFF2P51816 1311 aa35.83■■■■□ 3.33
CGREF1-207ENST00000440612 RLBP1P12271 317 aa35.83■■■■□ 3.33
CGREF1-207ENST00000440612 CANXP27824 592 aaKnown RBP35.82■■■■□ 3.33
CGREF1-207ENST00000440612 SLC39A6Q13433 755 aa35.82■■■■□ 3.33
CGREF1-207ENST00000440612 TRIM27P14373 513 aa35.81■■■■□ 3.32
CGREF1-207ENST00000440612 PANK1Q8TE04 598 aa35.81■■■■□ 3.32
CGREF1-207ENST00000440612 HOXB7P09629 217 aa35.8■■■■□ 3.32
CGREF1-207ENST00000440612 DDB1Q16531 1140 aa35.8■■■■□ 3.32
CGREF1-207ENST00000440612 PPP4R2Q9NY27 417 aa35.8■■■■□ 3.32
CGREF1-207ENST00000440612 ATF7IPQ6VMQ6 1270 aa35.79■■■■□ 3.32
CGREF1-207ENST00000440612 FAM98CQ17RN3 349 aaKnown RBP35.78■■■■□ 3.32
CGREF1-207ENST00000440612 GIGYF1O75420 1035 aaPredicted RBP35.78■■■■□ 3.32
CGREF1-207ENST00000440612 GLI3P10071 1580 aa35.77■■■■□ 3.32
CGREF1-207ENST00000440612 ATRNO75882 1429 aa35.77■■■■□ 3.32
CGREF1-207ENST00000440612 ARHGAP45Q92619 1136 aa35.77■■■■□ 3.32
CGREF1-207ENST00000440612 MARCH10Q8NA82 808 aaPredicted RBP35.75■■■■□ 3.31
CGREF1-207ENST00000440612 PAPPAQ13219 1627 aa35.75■■■■□ 3.31
CGREF1-207ENST00000440612 IPO8O15397 1037 aaKnown RBP35.75■■■■□ 3.31
CGREF1-207ENST00000440612 CLUAP1Q96AJ1 413 aa35.75■■■■□ 3.31
CGREF1-207ENST00000440612 ZNF496Q96IT1 587 aaPredicted RBP35.74■■■■□ 3.31
CGREF1-207ENST00000440612 THSD7AQ9UPZ6 1657 aa35.73■■■■□ 3.31
CGREF1-207ENST00000440612 CCDC30Q5VVM6 783 aa35.73■■■■□ 3.31
CGREF1-207ENST00000440612 DZIP1LQ8IYY4 767 aaKnown RBP35.73■■■■□ 3.31
CGREF1-207ENST00000440612 PRAMEF22A3QJZ6 481 aa35.72■■■■□ 3.31
CGREF1-207ENST00000440612 SLC4A2P04920 1241 aa35.72■■■■□ 3.31
CGREF1-207ENST00000440612 COG6Q9Y2V7 657 aa35.72■■■■□ 3.31
CGREF1-207ENST00000440612 GJD4Q96KN9 370 aaPredicted RBP35.72■■■■□ 3.31
CGREF1-207ENST00000440612 HDGFL1Q5TGJ6 251 aa35.71■■■■□ 3.31
CGREF1-207ENST00000440612 RGS12O14924 1447 aa35.7■■■■□ 3.31
CGREF1-207ENST00000440612 NECTIN2Q92692 538 aa35.7■■■■□ 3.31
CGREF1-207ENST00000440612 UBR2Q8IWV8 1755 aa35.69■■■■□ 3.3
CGREF1-207ENST00000440612 G2E3Q7L622 706 aa35.69■■■■□ 3.3
CGREF1-207ENST00000440612 PIGBQ92521 554 aa35.68■■■■□ 3.3
CGREF1-207ENST00000440612 KCPQ6ZWJ8 1503 aa35.68■■■■□ 3.3
CGREF1-207ENST00000440612 ITGB4P16144 1822 aa35.68■■■■□ 3.3
CGREF1-207ENST00000440612 MS4A1P11836 297 aa35.68■■■■□ 3.3
CGREF1-207ENST00000440612 TMOD3Q9NYL9 352 aa35.68■■■■□ 3.3
CGREF1-207ENST00000440612 TRPC5Q9UL62 973 aaPredicted RBP35.68■■■■□ 3.3
CGREF1-207ENST00000440612 TTC5Q8N0Z6 440 aa35.67■■■■□ 3.3
CGREF1-207ENST00000440612 C5P01031 1676 aa35.67■■■■□ 3.3
CGREF1-207ENST00000440612 BCL9O00512 1426 aa35.67■■■■□ 3.3
CGREF1-207ENST00000440612 ABCC4O15439 1325 aa35.66■■■■□ 3.3
CGREF1-207ENST00000440612 ONECUT3O60422 494 aaPredicted RBP35.65■■■■□ 3.3
CGREF1-207ENST00000440612 EIF2S2P20042 333 aaKnown RBP35.65■■■■□ 3.3
CGREF1-207ENST00000440612 STK31Q9BXU1 1019 aa35.65■■■■□ 3.3
CGREF1-207ENST00000440612 FTSJ3Q8IY81 847 aaKnown RBP35.65■■■■□ 3.3
CGREF1-207ENST00000440612 FMNL2Q96PY5 1086 aa35.65■■■■□ 3.3
CGREF1-207ENST00000440612 MVPQ14764 893 aaKnown RBP35.64■■■■□ 3.3
CGREF1-207ENST00000440612 B4GALNT3Q6L9W6 998 aa35.64■■■■□ 3.3
CGREF1-207ENST00000440612 TMEM57Q8N5G2 664 aa35.64■■■■□ 3.3
CGREF1-207ENST00000440612 DOT1LQ8TEK3 1739 aa35.64■■■■□ 3.3
CGREF1-207ENST00000440612 PTPRCP08575 1304 aa35.63■■■■□ 3.3
CGREF1-207ENST00000440612 API5Q9BZZ5 524 aaKnown RBP35.63■■■■□ 3.29
CGREF1-207ENST00000440612 FBXO41Q8TF61 875 aa35.62■■■■□ 3.29
CGREF1-207ENST00000440612 CHPF2Q9P2E5 772 aa35.62■■■■□ 3.29
CGREF1-207ENST00000440612 SNRPA1P09661 255 aaKnown RBP35.61■■■■□ 3.29
CGREF1-207ENST00000440612 PRIM1P49642 420 aaKnown RBP35.6■■■■□ 3.29
CGREF1-207ENST00000440612 CHMP4AQ9BY43 222 aa35.6■■■■□ 3.29
CGREF1-207ENST00000440612 QTRT2Q9H974 415 aaKnown RBP35.6■■■■□ 3.29
CGREF1-207ENST00000440612 ATG3Q9NT62 314 aa35.6■■■■□ 3.29
CGREF1-207ENST00000440612 ASAP1Q9ULH1 1129 aa35.6■■■■□ 3.29
CGREF1-207ENST00000440612 CACNA1FO60840 1977 aa35.6■■■■□ 3.29
CGREF1-207ENST00000440612 FLIIQ13045 1269 aa35.59■■■■□ 3.29
CGREF1-207ENST00000440612 USP16Q9Y5T5 823 aa35.58■■■■□ 3.29
CGREF1-207ENST00000440612 PDIA6Q15084 440 aa35.57■■■■□ 3.28
CGREF1-207ENST00000440612 PROSER3Q2NL68 480 aa35.56■■■■□ 3.28
CGREF1-207ENST00000440612 PHAXQ9H814 394 aaKnown RBP35.56■■■■□ 3.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms