RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 MEN1O00255 615 aa7.23□□□□□ -1.25
TRAPPC13-204ENST00000438419 LMOD1P29536 600 aaPredicted RBP7.23□□□□□ -1.25
TRAPPC13-204ENST00000438419 RNF144AP50876 292 aaPredicted RBP7.23□□□□□ -1.25
TRAPPC13-204ENST00000438419 GTF2IP78347 998 aa7.23□□□□□ -1.25
TRAPPC13-204ENST00000438419 CLDN10P78369 228 aa7.23□□□□□ -1.25
TRAPPC13-204ENST00000438419 RNF217Q8TC41 542 aa7.23□□□□□ -1.25
TRAPPC13-204ENST00000438419 POLMQ9NP87 494 aaPredicted RBP7.23□□□□□ -1.25
TRAPPC13-204ENST00000438419 MKRN1Q9UHC7 482 aaKnown RBP7.23□□□□□ -1.25
TRAPPC13-204ENST00000438419 KIAA1024Q9UPX6 916 aa7.23□□□□□ -1.25
TRAPPC13-204ENST00000438419 TMEM229AB2RXF0 380 aa7.22□□□□□ -1.25
TRAPPC13-204ENST00000438419 KRTAP1-3Q8IUG1 177 aa7.22□□□□□ -1.25
TRAPPC13-204ENST00000438419 CNKSR1Q969H4 720 aa7.22□□□□□ -1.25
TRAPPC13-204ENST00000438419 ESYT1Q9BSJ8 1104 aa7.22□□□□□ -1.25
TRAPPC13-204ENST00000438419 MAN1A2O60476 641 aa7.21□□□□□ -1.25
TRAPPC13-204ENST00000438419 DKK1O94907 266 aa7.21□□□□□ -1.25
TRAPPC13-204ENST00000438419 INHAP05111 366 aa7.21□□□□□ -1.25
TRAPPC13-204ENST00000438419 GDF10P55107 478 aa7.21□□□□□ -1.25
TRAPPC13-204ENST00000438419 CCDC82Q8N4S0 544 aa7.21□□□□□ -1.25
TRAPPC13-204ENST00000438419 GRIP2Q9C0E4 1043 aa7.21□□□□□ -1.25
TRAPPC13-204ENST00000438419 GPC1P35052 558 aa7.2□□□□□ -1.26
TRAPPC13-204ENST00000438419 SRPK2P78362 688 aaKnown RBP7.2□□□□□ -1.26
TRAPPC13-204ENST00000438419 CENPCQ03188 943 aa7.2□□□□□ -1.26
TRAPPC13-204ENST00000438419 TRIM50Q86XT4 487 aa7.2□□□□□ -1.26
TRAPPC13-204ENST00000438419 OGFOD1Q8N543 542 aa7.2□□□□□ -1.26
TRAPPC13-204ENST00000438419 NLRP3Q96P20 1036 aa7.2□□□□□ -1.26
TRAPPC13-204ENST00000438419 FHDC1Q9C0D6 1143 aaPredicted RBP7.2□□□□□ -1.26
TRAPPC13-204ENST00000438419 DNMT3AQ9Y6K1 912 aaPredicted RBP7.2□□□□□ -1.26
TRAPPC13-204ENST00000438419 WASLO00401 505 aaPredicted RBP7.19□□□□□ -1.26
TRAPPC13-204ENST00000438419 RFX1P22670 979 aa7.19□□□□□ -1.26
TRAPPC13-204ENST00000438419 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.19□□□□□ -1.26
TRAPPC13-204ENST00000438419 ESCO1Q5FWF5 840 aa7.19□□□□□ -1.26
TRAPPC13-204ENST00000438419 DNAAF2Q9NVR5 837 aaKnown RBP7.19□□□□□ -1.26
TRAPPC13-204ENST00000438419 CRTC2Q53ET0 693 aaPredicted RBP7.18□□□□□ -1.26
TRAPPC13-204ENST00000438419 PRICKLE2Q7Z3G6 844 aa7.18□□□□□ -1.26
TRAPPC13-204ENST00000438419 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.18□□□□□ -1.26
TRAPPC13-204ENST00000438419 SLC4A9Q96Q91 983 aa7.18□□□□□ -1.26
TRAPPC13-204ENST00000438419 RASA1P20936 1047 aa7.18□□□□□ -1.26
TRAPPC13-204ENST00000438419 ATP1A2P50993 1020 aa7.18□□□□□ -1.26
TRAPPC13-204ENST00000438419 FOXK2Q01167 660 aa7.18□□□□□ -1.26
TRAPPC13-204ENST00000438419 PSME1Q06323 249 aa7.18□□□□□ -1.26
TRAPPC13-204ENST00000438419 CDCA8Q53HL2 280 aa7.18□□□□□ -1.26
TRAPPC13-204ENST00000438419 CCDC102BQ68D86 513 aa7.18□□□□□ -1.26
TRAPPC13-204ENST00000438419 LYSMD3Q7Z3D4 306 aa7.18□□□□□ -1.26
TRAPPC13-204ENST00000438419 LARGE2Q8N3Y3 721 aa7.18□□□□□ -1.26
TRAPPC13-204ENST00000438419 TPCN2Q8NHX9 752 aa7.18□□□□□ -1.26
TRAPPC13-204ENST00000438419 VRTNQ9H8Y1 702 aa7.18□□□□□ -1.26
TRAPPC13-204ENST00000438419 ZNF358Q9NW07 568 aa7.18□□□□□ -1.26
TRAPPC13-204ENST00000438419 SERTAD1Q9UHV2 236 aa7.18□□□□□ -1.26
TRAPPC13-204ENST00000438419 SENP3-EIF4A1A0A087X0R7 540 aa7.17□□□□□ -1.26
TRAPPC13-204ENST00000438419 PTSQ03393 145 aa7.17□□□□□ -1.26
TRAPPC13-204ENST00000438419 POU4F2Q12837 409 aa7.17□□□□□ -1.26
TRAPPC13-204ENST00000438419 PTK7Q13308 1070 aa7.17□□□□□ -1.26
TRAPPC13-204ENST00000438419 SIX5Q8N196 739 aa7.17□□□□□ -1.26
TRAPPC13-204ENST00000438419 ZNF594Q96JF6 807 aaPredicted RBP7.17□□□□□ -1.26
TRAPPC13-204ENST00000438419 ADAMTS8Q9UP79 889 aa7.17□□□□□ -1.26
TRAPPC13-204ENST00000438419 VSIG8P0DPA2 414 aa7.16□□□□□ -1.26
TRAPPC13-204ENST00000438419 RHOQP17081 205 aa7.16□□□□□ -1.26
TRAPPC13-204ENST00000438419 SMTNP53814 917 aa7.16□□□□□ -1.26
TRAPPC13-204ENST00000438419 SLC27A3Q5K4L6 730 aa7.16□□□□□ -1.26
TRAPPC13-204ENST00000438419 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.15□□□□□ -1.27
TRAPPC13-204ENST00000438419 SLC35F4A4IF30 521 aa7.15□□□□□ -1.27
TRAPPC13-204ENST00000438419 SPATA31C2B4DYI2 1134 aa7.15□□□□□ -1.27
TRAPPC13-204ENST00000438419 ADAM23O75077 832 aa7.15□□□□□ -1.27
TRAPPC13-204ENST00000438419 MTFR1Q15390 333 aa7.15□□□□□ -1.27
TRAPPC13-204ENST00000438419 TLR1Q15399 786 aa7.15□□□□□ -1.27
TRAPPC13-204ENST00000438419 ZNF295-AS1Q8N0V1 137 aa7.15□□□□□ -1.27
TRAPPC13-204ENST00000438419 ZSCAN10Q96SZ4 725 aaPredicted RBP7.15□□□□□ -1.27
TRAPPC13-204ENST00000438419 USP3Q9Y6I4 520 aa7.15□□□□□ -1.27
TRAPPC13-204ENST00000438419 FAM196BA6NMK8 535 aa7.14□□□□□ -1.27
TRAPPC13-204ENST00000438419 SFI1A8K8P3 1242 aa7.14□□□□□ -1.27
TRAPPC13-204ENST00000438419 USP17L15C9J2P7 530 aa7.14□□□□□ -1.27
TRAPPC13-204ENST00000438419 USP17L10C9JJH3 530 aa7.14□□□□□ -1.27
TRAPPC13-204ENST00000438419 USP17L13C9JLJ4 530 aa7.14□□□□□ -1.27
TRAPPC13-204ENST00000438419 USP17L12C9JPN9 530 aa7.14□□□□□ -1.27
TRAPPC13-204ENST00000438419 USP17L11C9JVI0 530 aa7.14□□□□□ -1.27
TRAPPC13-204ENST00000438419 USP17L21D6R901 530 aa7.14□□□□□ -1.27
TRAPPC13-204ENST00000438419 USP17L18D6R9N7 530 aa7.14□□□□□ -1.27
TRAPPC13-204ENST00000438419 USP17L22D6RA61 530 aa7.14□□□□□ -1.27
TRAPPC13-204ENST00000438419 USP17L17D6RBQ6 530 aa7.14□□□□□ -1.27
TRAPPC13-204ENST00000438419 USP17L19D6RCP7 530 aa7.14□□□□□ -1.27
TRAPPC13-204ENST00000438419 USP17L20D6RJB6 530 aa7.14□□□□□ -1.27
TRAPPC13-204ENST00000438419 EPHA4P54764 986 aa7.14□□□□□ -1.27
TRAPPC13-204ENST00000438419 USP17L24Q0WX57 530 aa7.14□□□□□ -1.27
TRAPPC13-204ENST00000438419 NBPF10Q6P3W6 841 aaKnown RBP7.14□□□□□ -1.27
TRAPPC13-204ENST00000438419 LARP1Q6PKG0 1096 aaKnown RBP7.14□□□□□ -1.27
TRAPPC13-204ENST00000438419 PPARGC1BQ86YN6 1023 aaKnown RBP7.14□□□□□ -1.27
TRAPPC13-204ENST00000438419 NBPF15Q8N660 670 aa7.14□□□□□ -1.27
TRAPPC13-204ENST00000438419 ARXQ96QS3 562 aa7.14□□□□□ -1.27
TRAPPC13-204ENST00000438419 ARID3AQ99856 593 aa7.14□□□□□ -1.27
TRAPPC13-204ENST00000438419 IQSEC3Q9UPP2 1182 aaPredicted RBP7.14□□□□□ -1.27
TRAPPC13-204ENST00000438419 A6NJY4 79 aa7.13□□□□□ -1.27
TRAPPC13-204ENST00000438419 PPFIA3O75145 1194 aa7.13□□□□□ -1.27
TRAPPC13-204ENST00000438419 DPYDQ12882 1025 aa7.13□□□□□ -1.27
TRAPPC13-204ENST00000438419 TNS4Q8IZW8 715 aa7.13□□□□□ -1.27
TRAPPC13-204ENST00000438419 CDK2AP1O14519 115 aa7.12□□□□□ -1.27
TRAPPC13-204ENST00000438419 BACH1O14867 736 aa7.12□□□□□ -1.27
TRAPPC13-204ENST00000438419 IRS1P35568 1242 aa7.12□□□□□ -1.27
TRAPPC13-204ENST00000438419 C4orf17Q53FE4 359 aa7.12□□□□□ -1.27
TRAPPC13-204ENST00000438419 WDR44Q5JSH3 913 aa7.12□□□□□ -1.27
TRAPPC13-204ENST00000438419 ANKMY2Q8IV38 441 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms