RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 ZBTB47Q9UFB7 747 aaPredicted RBP32.35■■■□□ 2.77
CPNE1-216ENST00000437340 OVOS2A0A0G2JMS6 1433 aa32.34■■■□□ 2.77
CPNE1-216ENST00000437340 NUCB1Q02818 461 aa32.34■■■□□ 2.77
CPNE1-216ENST00000437340 ZNF530Q6P9A1 599 aaPredicted RBP32.34■■■□□ 2.77
CPNE1-216ENST00000437340 DDRGK1Q96HY6 314 aa32.33■■■□□ 2.77
CPNE1-216ENST00000437340 FAM208AQ9UK61 1670 aaKnown RBP32.33■■■□□ 2.77
CPNE1-216ENST00000437340 CHMP4AQ9BY43 222 aa32.3■■■□□ 2.76
CPNE1-216ENST00000437340 C1orf115Q9H7X2 142 aa32.3■■■□□ 2.76
CPNE1-216ENST00000437340 C1orf141Q5JVX7 400 aa32.3■■■□□ 2.76
CPNE1-216ENST00000437340 PRDM11Q9NQV5 511 aa32.3■■■□□ 2.76
CPNE1-216ENST00000437340 LGR6Q9HBX8 967 aa32.29■■■□□ 2.76
CPNE1-216ENST00000437340 HOXB7P09629 217 aa32.28■■■□□ 2.76
CPNE1-216ENST00000437340 SIRT2Q8IXJ6 389 aa32.28■■■□□ 2.76
CPNE1-216ENST00000437340 CACNA1FO60840 1977 aa32.27■■■□□ 2.76
CPNE1-216ENST00000437340 CCT4P50991 539 aaKnown RBP32.27■■■□□ 2.76
CPNE1-216ENST00000437340 PLEKHG2Q9H7P9 1386 aa32.27■■■□□ 2.76
CPNE1-216ENST00000437340 G2E3Q7L622 706 aa32.27■■■□□ 2.76
CPNE1-216ENST00000437340 CHD1LQ86WJ1 897 aa32.27■■■□□ 2.76
CPNE1-216ENST00000437340 TEFQ10587 303 aa32.26■■■□□ 2.75
CPNE1-216ENST00000437340 KDM3BQ7LBC6 1761 aa32.25■■■□□ 2.75
CPNE1-216ENST00000437340 RNMTO43148 476 aaKnown RBP32.24■■■□□ 2.75
CPNE1-216ENST00000437340 RPAP2Q8IXW5 612 aaPredicted RBP32.24■■■□□ 2.75
CPNE1-216ENST00000437340 EIF4A1P60842 406 aaKnown RBP32.24■■■□□ 2.75
CPNE1-216ENST00000437340 FLIIQ13045 1269 aa32.24■■■□□ 2.75
CPNE1-216ENST00000437340 ANKRD44Q8N8A2 993 aa32.22■■■□□ 2.75
CPNE1-216ENST00000437340 ATP10DQ9P241 1426 aa32.21■■■□□ 2.75
CPNE1-216ENST00000437340 MPRIPQ6WCQ1 1025 aa32.21■■■□□ 2.75
CPNE1-216ENST00000437340 COL14A1Q05707 1796 aaKnown RBP32.21■■■□□ 2.75
CPNE1-216ENST00000437340 COL5A2P05997 1499 aaPredicted RBP32.21■■■□□ 2.75
CPNE1-216ENST00000437340 HDGFL1Q5TGJ6 251 aa32.2■■■□□ 2.75
CPNE1-216ENST00000437340 BTBD11A6QL63 1104 aa32.19■■■□□ 2.74
CPNE1-216ENST00000437340 RAPGEF4Q8WZA2 1011 aa32.19■■■□□ 2.74
CPNE1-216ENST00000437340 LNPKQ9C0E8 428 aa32.19■■■□□ 2.74
CPNE1-216ENST00000437340 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP32.19■■■□□ 2.741e-6■■□□□ 12.2
CPNE1-216ENST00000437340 ADAMTS7Q9UKP4 1686 aa32.18■■■□□ 2.74
CPNE1-216ENST00000437340 CSB-PGBD3P0DP91 1061 aa32.18■■■□□ 2.74
CPNE1-216ENST00000437340 ANKRD45Q5TZF3 282 aa32.18■■■□□ 2.74
CPNE1-216ENST00000437340 DCTPP1Q9H773 170 aa32.18■■■□□ 2.74
CPNE1-216ENST00000437340 NLRP2Q9NX02 1062 aa32.18■■■□□ 2.74
CPNE1-216ENST00000437340 PXDNLA1KZ92 1463 aa32.17■■■□□ 2.74
CPNE1-216ENST00000437340 FKBP5Q13451 457 aaPredicted RBP32.17■■■□□ 2.74
CPNE1-216ENST00000437340 CEP85Q6P2H3 762 aa32.17■■■□□ 2.74
CPNE1-216ENST00000437340 MEIS3Q99687 375 aa32.17■■■□□ 2.74
CPNE1-216ENST00000437340 F6X3S4 739 aa32.16■■■□□ 2.74
CPNE1-216ENST00000437340 SLC4A10Q6U841 1118 aa32.15■■■□□ 2.74
CPNE1-216ENST00000437340 SEC24BO95487 1268 aa32.14■■■□□ 2.74
CPNE1-216ENST00000437340 TATP17735 454 aaPredicted RBP32.14■■■□□ 2.74
CPNE1-216ENST00000437340 UPF2Q9HAU5 1272 aaKnown RBP32.14■■■□□ 2.74
CPNE1-216ENST00000437340 NECTIN2Q92692 538 aa32.13■■■□□ 2.73
CPNE1-216ENST00000437340 PLCH1Q4KWH8 1693 aa32.13■■■□□ 2.73
CPNE1-216ENST00000437340 WDR17Q8IZU2 1322 aa32.13■■■□□ 2.73
CPNE1-216ENST00000437340 SPG7Q9UQ90 795 aa32.12■■■□□ 2.73
CPNE1-216ENST00000437340 N4BP2Q86UW6 1770 aaPredicted RBP32.11■■■□□ 2.73
CPNE1-216ENST00000437340 HEG1Q9ULI3 1381 aa32.1■■■□□ 2.73
CPNE1-216ENST00000437340 KCNQ3O43525 872 aa32.09■■■□□ 2.73
CPNE1-216ENST00000437340 SIPA1L3O60292 1781 aaPredicted RBP32.09■■■□□ 2.73
CPNE1-216ENST00000437340 MEGF6O75095 1541 aa32.09■■■□□ 2.73
CPNE1-216ENST00000437340 HMMRO75330 724 aa32.09■■■□□ 2.73
CPNE1-216ENST00000437340 GNAI3P08754 354 aa32.09■■■□□ 2.73
CPNE1-216ENST00000437340 BMP2KLQ5H9B9 411 aa32.09■■■□□ 2.73
CPNE1-216ENST00000437340 GNAI2P04899 355 aa32.07■■■□□ 2.72
CPNE1-216ENST00000437340 STRN4Q9NRL3 753 aa32.07■■■□□ 2.72
CPNE1-216ENST00000437340 BTG4Q9NY30 223 aa32.07■■■□□ 2.72
CPNE1-216ENST00000437340 EIF2S2P20042 333 aaKnown RBP32.06■■■□□ 2.72
CPNE1-216ENST00000437340 PKD1L3Q7Z443 1732 aa32.05■■■□□ 2.72
CPNE1-216ENST00000437340 PARP4Q9UKK3 1724 aaKnown RBP32.05■■■□□ 2.72
CPNE1-216ENST00000437340 JCADQ9P266 1359 aa32.05■■■□□ 2.72
CPNE1-216ENST00000437340 PHKG2P15735 406 aa32.05■■■□□ 2.72
CPNE1-216ENST00000437340 TOM1L2Q6ZVM7 507 aa32.05■■■□□ 2.72
CPNE1-216ENST00000437340 NUTM2BA6NNL0 878 aaPredicted RBP32.04■■■□□ 2.72
CPNE1-216ENST00000437340 NUTM2EB1AL46 878 aaPredicted RBP32.04■■■□□ 2.72
CPNE1-216ENST00000437340 ADAMTS2O95450 1211 aa32.04■■■□□ 2.72
CPNE1-216ENST00000437340 NUTM2AQ8IVF1 878 aaPredicted RBP32.04■■■□□ 2.72
CPNE1-216ENST00000437340 IFNL2Q8IZJ0 200 aa32.04■■■□□ 2.72
CPNE1-216ENST00000437340 NRAPQ86VF7 1730 aa32.04■■■□□ 2.72
CPNE1-216ENST00000437340 LARP1Q6PKG0 1096 aaKnown RBP32.04■■■□□ 2.72
CPNE1-216ENST00000437340 TBC1D32Q96NH3 1257 aa32.04■■■□□ 2.72
CPNE1-216ENST00000437340 GIGYF1O75420 1035 aaPredicted RBP32.03■■■□□ 2.72
CPNE1-216ENST00000437340 EVA1CP58658 441 aa32.03■■■□□ 2.72
CPNE1-216ENST00000437340 PHAXQ9H814 394 aaKnown RBP32.03■■■□□ 2.72
CPNE1-216ENST00000437340 CHPF2Q9P2E5 772 aa32.03■■■□□ 2.72
CPNE1-216ENST00000437340 DBF4Q9UBU7 674 aaPredicted RBP32.02■■■□□ 2.72
CPNE1-216ENST00000437340 KDM6AO15550 1401 aaPredicted RBP32.01■■■□□ 2.72
CPNE1-216ENST00000437340 SCN11AQ9UI33 1791 aa32.01■■■□□ 2.71
CPNE1-216ENST00000437340 SLC52A2Q9HAB3 445 aa32.01■■■□□ 2.71
CPNE1-216ENST00000437340 DAXXQ9UER7 740 aaPredicted RBP32.01■■■□□ 2.71
CPNE1-216ENST00000437340 CARD10Q9BWT7 1032 aa31.99■■■□□ 2.71
CPNE1-216ENST00000437340 HSP90AB1P08238 724 aaKnown RBP31.99■■■□□ 2.71
CPNE1-216ENST00000437340 NWD2Q9ULI1 1742 aa31.98■■■□□ 2.71
CPNE1-216ENST00000437340 DCAF5Q96JK2 942 aa31.98■■■□□ 2.71
CPNE1-216ENST00000437340 HSPA1LP34931 641 aa31.96■■■□□ 2.71
CPNE1-216ENST00000437340 SRCIN1Q9C0H9 1055 aa31.96■■■□□ 2.71
CPNE1-216ENST00000437340 MRC1P22897 1456 aa31.96■■■□□ 2.71
CPNE1-216ENST00000437340 PLEKHM2Q8IWE5 1019 aa31.96■■■□□ 2.71
CPNE1-216ENST00000437340 USP44Q9H0E7 712 aa31.96■■■□□ 2.71
CPNE1-216ENST00000437340 MYT1Q01538 1121 aa31.95■■■□□ 2.71
CPNE1-216ENST00000437340 ZNF790Q6PG37 636 aa31.95■■■□□ 2.71
CPNE1-216ENST00000437340 DNAAF4Q8WXU2 420 aa31.95■■■□□ 2.71
CPNE1-216ENST00000437340 ATP8B2P98198 1209 aa31.94■■■□□ 2.7
CPNE1-216ENST00000437340 WNK3Q9BYP7 1800 aa31.94■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms