RNA–Protein interactions for RNA: ENST00000436554.5

LINC00271-202, long intergenic non-protein coding RNA 271, humanhuman

TSL 5 BASIC

Gene LINC00271, Length 655 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-202ENST00000436554 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.1■□□□□ 0.17
LINC00271-202ENST00000436554 PHKG2P15735 406 aa16.09■□□□□ 0.17
LINC00271-202ENST00000436554 CDCA8Q53HL2 280 aa16.09■□□□□ 0.17
LINC00271-202ENST00000436554 NLGN1Q8N2Q7 840 aa16.09■□□□□ 0.17
LINC00271-202ENST00000436554 RTCBQ9Y3I0 505 aaKnown RBP16.09■□□□□ 0.17
LINC00271-202ENST00000436554 WASHC2AQ641Q2 1341 aa16.09■□□□□ 0.17
LINC00271-202ENST00000436554 TOGARAM1Q9Y4F4 1720 aa16.08■□□□□ 0.17
LINC00271-202ENST00000436554 UBR3Q6ZT12 1888 aa16.08■□□□□ 0.16
LINC00271-202ENST00000436554 DPEP1P16444 411 aa16.07■□□□□ 0.16
LINC00271-202ENST00000436554 ARHGEF1Q92888 912 aaKnown RBP16.07■□□□□ 0.16
LINC00271-202ENST00000436554 SLC4A9Q96Q91 983 aa16.07■□□□□ 0.16
LINC00271-202ENST00000436554 NMRK2Q9NPI5 230 aa16.07■□□□□ 0.16
LINC00271-202ENST00000436554 ITGB4P16144 1822 aa16.07■□□□□ 0.16
LINC00271-202ENST00000436554 FCHSD2O94868 740 aa16.06■□□□□ 0.16
LINC00271-202ENST00000436554 RBM42Q9BTD8 480 aaKnown RBP16.06■□□□□ 0.16
LINC00271-202ENST00000436554 PXDNLA1KZ92 1463 aa16.05■□□□□ 0.16
LINC00271-202ENST00000436554 NCAPD2Q15021 1401 aa16.05■□□□□ 0.16
LINC00271-202ENST00000436554 CCDC87Q9NVE4 849 aa16.05■□□□□ 0.16
LINC00271-202ENST00000436554 POLKQ9UBT6 870 aa16.05■□□□□ 0.16
LINC00271-202ENST00000436554 MAP2P11137 1827 aaKnown RBP16.05■□□□□ 0.16
LINC00271-202ENST00000436554 GYS1P13807 737 aa16.04■□□□□ 0.16
LINC00271-202ENST00000436554 RFC4P35249 363 aa16.04■□□□□ 0.16
LINC00271-202ENST00000436554 RC3H1Q5TC82 1133 aaKnown RBP16.04■□□□□ 0.16
LINC00271-202ENST00000436554 PARP3Q9Y6F1 533 aa16.04■□□□□ 0.16
LINC00271-202ENST00000436554 ERVV-2B6SEH9 535 aa16.03■□□□□ 0.16
LINC00271-202ENST00000436554 KCNA3P22001 575 aa16.03■□□□□ 0.16
LINC00271-202ENST00000436554 C9orf131Q5VYM1 1079 aa16.03■□□□□ 0.16
LINC00271-202ENST00000436554 RPS6KA4O75676 772 aa16.02■□□□□ 0.16
LINC00271-202ENST00000436554 HTRA3P83110 453 aa16.02■□□□□ 0.16
LINC00271-202ENST00000436554 EIF4A2Q14240 407 aaKnown RBP16.02■□□□□ 0.16
LINC00271-202ENST00000436554 PKD1L3Q7Z443 1732 aa16.02■□□□□ 0.15
LINC00271-202ENST00000436554 TNNT2P45379 298 aaPredicted RBP16.01■□□□□ 0.15
LINC00271-202ENST00000436554 RBM46Q8TBY0 533 aaKnown RBP16.01■□□□□ 0.15
LINC00271-202ENST00000436554 C16orf71Q8IYS4 520 aaPredicted RBP16■□□□□ 0.15
LINC00271-202ENST00000436554 DCAF5Q96JK2 942 aa16■□□□□ 0.15
LINC00271-202ENST00000436554 PIM2Q9P1W9 311 aa16■□□□□ 0.15
LINC00271-202ENST00000436554 CICQ96RK0 1608 aaPredicted RBP16■□□□□ 0.15
LINC00271-202ENST00000436554 C10orf71Q711Q0 1435 aa16■□□□□ 0.15
LINC00271-202ENST00000436554 CNTNAP4Q9C0A0 1308 aa15.99■□□□□ 0.15
LINC00271-202ENST00000436554 HSP90AB1P08238 724 aaKnown RBP15.99■□□□□ 0.15
LINC00271-202ENST00000436554 CABP4P57796 275 aa15.99■□□□□ 0.15
LINC00271-202ENST00000436554 KDRP35968 1356 aa15.99■□□□□ 0.15
LINC00271-202ENST00000436554 PLEKHO1Q53GL0 409 aaPredicted RBP15.98■□□□□ 0.15
LINC00271-202ENST00000436554 DALRD3Q5D0E6 543 aaKnown RBP15.98■□□□□ 0.15
LINC00271-202ENST00000436554 RRAGCQ9HB90 399 aa15.98■□□□□ 0.15
LINC00271-202ENST00000436554 SRP68Q9UHB9 627 aaKnown RBP15.98■□□□□ 0.15
LINC00271-202ENST00000436554 N4BP2Q86UW6 1770 aaPredicted RBP15.98■□□□□ 0.15
LINC00271-202ENST00000436554 KIF20BQ96Q89 1820 aa15.97■□□□□ 0.15
LINC00271-202ENST00000436554 PTCD1O75127 700 aaKnown RBP15.97■□□□□ 0.15
LINC00271-202ENST00000436554 FSTL1Q12841 308 aa15.97■□□□□ 0.15
LINC00271-202ENST00000436554 FKBP8Q14318 412 aa15.97■□□□□ 0.15
LINC00271-202ENST00000436554 KLRG1Q96E93 195 aa15.97■□□□□ 0.15
LINC00271-202ENST00000436554 MTHFSP49914 203 aa15.96■□□□□ 0.15
LINC00271-202ENST00000436554 COL13A1Q5TAT6 717 aaPredicted RBP15.96■□□□□ 0.15
LINC00271-202ENST00000436554 ZNF530Q6P9A1 599 aaPredicted RBP15.96■□□□□ 0.15
LINC00271-202ENST00000436554 RNF181Q9P0P0 153 aa15.96■□□□□ 0.15
LINC00271-202ENST00000436554 CHRNA5P30532 468 aa15.95■□□□□ 0.14
LINC00271-202ENST00000436554 CRKLP46109 303 aaKnown RBP15.95■□□□□ 0.14
LINC00271-202ENST00000436554 DDR1Q08345 913 aa15.95■□□□□ 0.14
LINC00271-202ENST00000436554 JMYQ8N9B5 988 aa15.95■□□□□ 0.14
LINC00271-202ENST00000436554 NFATC2IPQ8NCF5 419 aa15.95■□□□□ 0.14
LINC00271-202ENST00000436554 POLR3GLQ9BT43 218 aa15.95■□□□□ 0.14
LINC00271-202ENST00000436554 KDM2BQ8NHM5 1336 aa15.94■□□□□ 0.14
LINC00271-202ENST00000436554 KIAA1551Q9HCM1 1747 aa15.94■□□□□ 0.14
LINC00271-202ENST00000436554 KIF13BQ9NQT8 1826 aa15.94■□□□□ 0.14
LINC00271-202ENST00000436554 TRIM26Q12899 539 aaPredicted RBP15.94■□□□□ 0.14
LINC00271-202ENST00000436554 AMOTQ4VCS5 1084 aa15.93■□□□□ 0.14
LINC00271-202ENST00000436554 PLEKHG2Q9H7P9 1386 aa15.92■□□□□ 0.14
LINC00271-202ENST00000436554 TM4SF1P30408 202 aa15.92■□□□□ 0.14
LINC00271-202ENST00000436554 INTS5Q6P9B9 1019 aaKnown RBP15.92■□□□□ 0.14
LINC00271-202ENST00000436554 USP42Q9H9J4 1324 aaKnown RBP15.92■□□□□ 0.14
LINC00271-202ENST00000436554 C4AP0C0L4 1744 aa15.91■□□□□ 0.14
LINC00271-202ENST00000436554 KCPQ6ZWJ8 1503 aa15.91■□□□□ 0.14
LINC00271-202ENST00000436554 C1orf141Q5JVX7 400 aa15.91■□□□□ 0.14
LINC00271-202ENST00000436554 KDM6AO15550 1401 aaPredicted RBP15.91■□□□□ 0.14
LINC00271-202ENST00000436554 POLRMTO00411 1230 aaKnown RBP15.9■□□□□ 0.14
LINC00271-202ENST00000436554 CAPN15O75808 1086 aa15.9■□□□□ 0.14
LINC00271-202ENST00000436554 AEBP1Q8IUX7 1158 aa15.9■□□□□ 0.14
LINC00271-202ENST00000436554 ZPR1O75312 459 aa15.89■□□□□ 0.13
LINC00271-202ENST00000436554 SMC1BQ8NDV3 1235 aa15.89■□□□□ 0.13
LINC00271-202ENST00000436554 MYH14Q7Z406 1995 aaKnown RBP15.89■□□□□ 0.13
LINC00271-202ENST00000436554 USPL1Q5W0Q7 1092 aa15.88■□□□□ 0.13
LINC00271-202ENST00000436554 ANKRD26Q9UPS8 1709 aa15.88■□□□□ 0.13
LINC00271-202ENST00000436554 RASSF7Q02833 373 aa15.87■□□□□ 0.13
LINC00271-202ENST00000436554 SULT6B1Q6IMI4 303 aa15.87■□□□□ 0.13
LINC00271-202ENST00000436554 DNAJC10Q8IXB1 793 aa15.87■□□□□ 0.13
LINC00271-202ENST00000436554 TNS4Q8IZW8 715 aa15.87■□□□□ 0.13
LINC00271-202ENST00000436554 PANK3Q9H999 370 aa15.87■□□□□ 0.13
LINC00271-202ENST00000436554 PCNTO95613 3336 aa15.86■□□□□ 0.13
LINC00271-202ENST00000436554 ZNF831Q5JPB2 1677 aa15.86■□□□□ 0.13
LINC00271-202ENST00000436554 WDR90Q96KV7 1748 aa15.85■□□□□ 0.13
LINC00271-202ENST00000436554 BRCA1P38398 1863 aaKnown RBP15.85■□□□□ 0.13
LINC00271-202ENST00000436554 GLTPD2A6NH11 291 aa15.85■□□□□ 0.13
LINC00271-202ENST00000436554 VEGFAP15692 232 aaPredicted RBP15.85■□□□□ 0.13
LINC00271-202ENST00000436554 PRELPP51888 382 aa15.85■□□□□ 0.13
LINC00271-202ENST00000436554 NFIXQ14938 502 aa15.85■□□□□ 0.13
LINC00271-202ENST00000436554 CYP19A1P11511 503 aaPredicted RBP15.84■□□□□ 0.13
LINC00271-202ENST00000436554 LMNB1P20700 586 aa15.84■□□□□ 0.13
LINC00271-202ENST00000436554 MORC1Q86VD1 984 aa15.84■□□□□ 0.13
LINC00271-202ENST00000436554 LGR6Q9HBX8 967 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms