RNA–Protein interactions for RNA: ENST00000436359.1

AP001048.1-201, humanhuman

TSL 2 BASIC

Gene AP001048.1, Length 280 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001048.1-201ENST00000436359 SIK1P57059 783 aa10.05□□□□□ -0.8
AP001048.1-201ENST00000436359 SPG7Q9UQ90 795 aa10.05□□□□□ -0.8
AP001048.1-201ENST00000436359 KCPQ6ZWJ8 1503 aa10.04□□□□□ -0.8
AP001048.1-201ENST00000436359 YBX3P16989 372 aaKnown RBP eCLIP10.04□□□□□ -0.8
AP001048.1-201ENST00000436359 IFNL2Q8IZJ0 200 aa10.04□□□□□ -0.8
AP001048.1-201ENST00000436359 CNTNAP4Q9C0A0 1308 aa10.04□□□□□ -0.8
AP001048.1-201ENST00000436359 BCORQ6W2J9 1755 aa10.03□□□□□ -0.8
AP001048.1-201ENST00000436359 ITPK1Q13572 414 aa10.03□□□□□ -0.8
AP001048.1-201ENST00000436359 MPRIPQ6WCQ1 1025 aa10.03□□□□□ -0.8
AP001048.1-201ENST00000436359 LINC00116Q8NCU8 138 aa10.03□□□□□ -0.8
AP001048.1-201ENST00000436359 ARFGEF2Q9Y6D5 1785 aa10.03□□□□□ -0.8
AP001048.1-201ENST00000436359 NPC1L1Q9UHC9 1359 aa10.02□□□□□ -0.8
AP001048.1-201ENST00000436359 ERVV-2B6SEH9 535 aa10.02□□□□□ -0.81
AP001048.1-201ENST00000436359 EIF4G2P78344 907 aaKnown RBP eCLIP10.02□□□□□ -0.81
AP001048.1-201ENST00000436359 SLC4A9Q96Q91 983 aa10.02□□□□□ -0.81
AP001048.1-201ENST00000436359 ATP10DQ9P241 1426 aa10.01□□□□□ -0.81
AP001048.1-201ENST00000436359 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.01□□□□□ -0.81
AP001048.1-201ENST00000436359 GRIN3BO60391 1043 aa10.01□□□□□ -0.81
AP001048.1-201ENST00000436359 HSPA5P11021 654 aaKnown RBP10.01□□□□□ -0.81
AP001048.1-201ENST00000436359 AMER1Q5JTC6 1135 aaPredicted RBP10.01□□□□□ -0.81
AP001048.1-201ENST00000436359 ATG3Q9NT62 314 aa10.01□□□□□ -0.81
AP001048.1-201ENST00000436359 TMOD3Q9NYL9 352 aa10.01□□□□□ -0.81
AP001048.1-201ENST00000436359 ASAP1Q9ULH1 1129 aa10.01□□□□□ -0.81
AP001048.1-201ENST00000436359 TNRC6CQ9HCJ0 1690 aaKnown RBP10.01□□□□□ -0.81
AP001048.1-201ENST00000436359 ANKRD31Q8N7Z5 1873 aa10.01□□□□□ -0.81
AP001048.1-201ENST00000436359 DICER1Q9UPY3 1922 aaKnown RBP10.01□□□□□ -0.81
AP001048.1-201ENST00000436359 HSP90AB1P08238 724 aaKnown RBP10□□□□□ -0.81
AP001048.1-201ENST00000436359 ADRA2BP18089 450 aa10□□□□□ -0.81
AP001048.1-201ENST00000436359 C1QTNF8P60827 252 aa10□□□□□ -0.81
AP001048.1-201ENST00000436359 RC3H1Q5TC82 1133 aaKnown RBP10□□□□□ -0.81
AP001048.1-201ENST00000436359 DCAF5Q96JK2 942 aa10□□□□□ -0.81
AP001048.1-201ENST00000436359 AK7Q96M32 723 aa10□□□□□ -0.81
AP001048.1-201ENST00000436359 GPR162Q16538 588 aa9.99□□□□□ -0.81
AP001048.1-201ENST00000436359 AMOTQ4VCS5 1084 aa9.99□□□□□ -0.81
AP001048.1-201ENST00000436359 MSL1Q68DK7 614 aa9.99□□□□□ -0.81
AP001048.1-201ENST00000436359 PANK3Q9H999 370 aa9.99□□□□□ -0.81
AP001048.1-201ENST00000436359 CCDC88AQ3V6T2 1871 aa9.99□□□□□ -0.81
AP001048.1-201ENST00000436359 TIAM2Q8IVF5 1701 aa9.99□□□□□ -0.81
AP001048.1-201ENST00000436359 COL11A2P13942 1736 aaPredicted RBP9.98□□□□□ -0.81
AP001048.1-201ENST00000436359 LAMB4A4D0S4 1761 aa9.98□□□□□ -0.81
AP001048.1-201ENST00000436359 GNPATO15228 680 aa9.97□□□□□ -0.81
AP001048.1-201ENST00000436359 PER1O15534 1290 aaPredicted RBP9.97□□□□□ -0.81
AP001048.1-201ENST00000436359 IL13P35225 146 aa9.97□□□□□ -0.81
AP001048.1-201ENST00000436359 KIF7Q2M1P5 1343 aa9.97□□□□□ -0.81
AP001048.1-201ENST00000436359 FER1L6Q2WGJ9 1857 aa9.97□□□□□ -0.81
AP001048.1-201ENST00000436359 DLG5Q8TDM6 1919 aa9.97□□□□□ -0.81
AP001048.1-201ENST00000436359 WDR90Q96KV7 1748 aa9.96□□□□□ -0.81
AP001048.1-201ENST00000436359 PPM1GO15355 546 aaPredicted RBP9.96□□□□□ -0.82
AP001048.1-201ENST00000436359 ATP6V1AP38606 617 aa9.96□□□□□ -0.82
AP001048.1-201ENST00000436359 AEBP1Q8IUX7 1158 aa9.96□□□□□ -0.82
AP001048.1-201ENST00000436359 GIGYF1O75420 1035 aaPredicted RBP9.95□□□□□ -0.82
AP001048.1-201ENST00000436359 RPS6KA4O75676 772 aa9.95□□□□□ -0.82
AP001048.1-201ENST00000436359 GYS1P13807 737 aa9.95□□□□□ -0.82
AP001048.1-201ENST00000436359 PLEKHO1Q53GL0 409 aaPredicted RBP9.95□□□□□ -0.82
AP001048.1-201ENST00000436359 ZNF530Q6P9A1 599 aaPredicted RBP9.95□□□□□ -0.82
AP001048.1-201ENST00000436359 KDM3BQ7LBC6 1761 aa9.94□□□□□ -0.82
AP001048.1-201ENST00000436359 USP42Q9H9J4 1324 aaKnown RBP9.94□□□□□ -0.82
AP001048.1-201ENST00000436359 PHF14O94880 888 aa9.94□□□□□ -0.82
AP001048.1-201ENST00000436359 SMIM5Q71RC9 77 aa9.94□□□□□ -0.82
AP001048.1-201ENST00000436359 KLHL34Q8N239 644 aa9.94□□□□□ -0.82
AP001048.1-201ENST00000436359 RTCBQ9Y3I0 505 aaKnown RBP9.94□□□□□ -0.82
AP001048.1-201ENST00000436359 CACNA1SQ13698 1873 aa9.93□□□□□ -0.82
AP001048.1-201ENST00000436359 MSH5O43196 834 aa9.93□□□□□ -0.82
AP001048.1-201ENST00000436359 MMP10P09238 476 aa9.93□□□□□ -0.82
AP001048.1-201ENST00000436359 TGFB2P61812 414 aa9.93□□□□□ -0.82
AP001048.1-201ENST00000436359 NLGN1Q8N2Q7 840 aa9.93□□□□□ -0.82
AP001048.1-201ENST00000436359 CEMIPQ8WUJ3 1361 aa9.92□□□□□ -0.82
AP001048.1-201ENST00000436359 SOS1Q07889 1333 aaPredicted RBP9.92□□□□□ -0.82
AP001048.1-201ENST00000436359 TNNT2P45379 298 aaPredicted RBP9.92□□□□□ -0.82
AP001048.1-201ENST00000436359 AKAP4Q5JQC9 854 aa9.92□□□□□ -0.82
AP001048.1-201ENST00000436359 MORC1Q86VD1 984 aa9.92□□□□□ -0.82
AP001048.1-201ENST00000436359 ARHGEF1Q92888 912 aaKnown RBP9.92□□□□□ -0.82
AP001048.1-201ENST00000436359 KCNA3P22001 575 aa9.91□□□□□ -0.82
AP001048.1-201ENST00000436359 CRKLP46109 303 aaKnown RBP9.91□□□□□ -0.82
AP001048.1-201ENST00000436359 SULT6B1Q6IMI4 303 aa9.91□□□□□ -0.82
AP001048.1-201ENST00000436359 SLC52A2Q9HAB3 445 aa9.91□□□□□ -0.82
AP001048.1-201ENST00000436359 KNSTRNQ9Y448 316 aa9.91□□□□□ -0.82
AP001048.1-201ENST00000436359 SENP3-EIF4A1A0A087X0R7 540 aa9.9□□□□□ -0.82
AP001048.1-201ENST00000436359 MTHFSP49914 203 aa9.9□□□□□ -0.82
AP001048.1-201ENST00000436359 CABP4P57796 275 aa9.9□□□□□ -0.82
AP001048.1-201ENST00000436359 C1orf141Q5JVX7 400 aa9.9□□□□□ -0.82
AP001048.1-201ENST00000436359 TRAPPC3LQ5T215 181 aa9.9□□□□□ -0.82
AP001048.1-201ENST00000436359 INTS5Q6P9B9 1019 aaKnown RBP9.9□□□□□ -0.82
AP001048.1-201ENST00000436359 PCGF6Q9BYE7 350 aa9.9□□□□□ -0.82
AP001048.1-201ENST00000436359 COL15A1P39059 1388 aa9.89□□□□□ -0.83
AP001048.1-201ENST00000436359 KIF3CO14782 793 aa9.89□□□□□ -0.83
AP001048.1-201ENST00000436359 DDR1Q08345 913 aa9.89□□□□□ -0.83
AP001048.1-201ENST00000436359 PELP1Q8IZL8 1130 aaKnown RBP9.89□□□□□ -0.83
AP001048.1-201ENST00000436359 VSIG10Q8N0Z9 540 aa9.89□□□□□ -0.83
AP001048.1-201ENST00000436359 NFATC2IPQ8NCF5 419 aa9.89□□□□□ -0.83
AP001048.1-201ENST00000436359 POLRMTO00411 1230 aaKnown RBP9.88□□□□□ -0.83
AP001048.1-201ENST00000436359 RNMTO43148 476 aaKnown RBP9.88□□□□□ -0.83
AP001048.1-201ENST00000436359 CYP19A1P11511 503 aaPredicted RBP9.88□□□□□ -0.83
AP001048.1-201ENST00000436359 TM4SF1P30408 202 aa9.88□□□□□ -0.83
AP001048.1-201ENST00000436359 CCDC87Q9NVE4 849 aa9.88□□□□□ -0.83
AP001048.1-201ENST00000436359 PCNTO95613 3336 aa9.87□□□□□ -0.83
AP001048.1-201ENST00000436359 ZC3H4Q9UPT8 1303 aaKnown RBP9.87□□□□□ -0.83
AP001048.1-201ENST00000436359 NUP98P52948 1817 aa9.87□□□□□ -0.83
AP001048.1-201ENST00000436359 FKBP8Q14318 412 aa9.87□□□□□ -0.83
AP001048.1-201ENST00000436359 RBM42Q9BTD8 480 aaKnown RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms