RNA–Protein interactions for RNA: ENST00000436289.6

NELFE-204, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 906 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-204ENST00000436289 FCHSD2O94868 740 aa21.05■□□□□ 0.96
NELFE-204ENST00000436289 ADRA2BP18089 450 aa21.05■□□□□ 0.96
NELFE-204ENST00000436289 SMIM5Q71RC9 77 aa21.05■□□□□ 0.96
NELFE-204ENST00000436289 RTCBQ9Y3I0 505 aaKnown RBP21.05■□□□□ 0.96
NELFE-204ENST00000436289 FLT4P35916 1363 aa21.05■□□□□ 0.96
NELFE-204ENST00000436289 TOGARAM1Q9Y4F4 1720 aa21.04■□□□□ 0.96
NELFE-204ENST00000436289 C9orf131Q5VYM1 1079 aa21.04■□□□□ 0.96
NELFE-204ENST00000436289 WDR90Q96KV7 1748 aa21.04■□□□□ 0.96
NELFE-204ENST00000436289 KIF13BQ9NQT8 1826 aa21.02■□□□□ 0.96
NELFE-204ENST00000436289 DPEP1P16444 411 aa21.02■□□□□ 0.96
NELFE-204ENST00000436289 GGNBP2Q9H3C7 697 aa21.02■□□□□ 0.96
NELFE-204ENST00000436289 ITGB4P16144 1822 aa21.01■□□□□ 0.95
NELFE-204ENST00000436289 ITPK1Q13572 414 aa21.01■□□□□ 0.95
NELFE-204ENST00000436289 RC3H1Q5TC82 1133 aaKnown RBP21.01■□□□□ 0.95
NELFE-204ENST00000436289 TESK2Q96S53 571 aa21.01■□□□□ 0.95
NELFE-204ENST00000436289 PIM2Q9P1W9 311 aa21.01■□□□□ 0.95
NELFE-204ENST00000436289 ASAP1Q9ULH1 1129 aa21.01■□□□□ 0.95
NELFE-204ENST00000436289 PARP3Q9Y6F1 533 aa21.01■□□□□ 0.95
NELFE-204ENST00000436289 C10orf71Q711Q0 1435 aa21.01■□□□□ 0.95
NELFE-204ENST00000436289 CAPN15O75808 1086 aa21■□□□□ 0.95
NELFE-204ENST00000436289 SMC1BQ8NDV3 1235 aa21■□□□□ 0.95
NELFE-204ENST00000436289 MAP2P11137 1827 aaKnown RBP20.99■□□□□ 0.95
NELFE-204ENST00000436289 IFNL2Q8IZJ0 200 aa20.99■□□□□ 0.95
NELFE-204ENST00000436289 RFC4P35249 363 aa20.98■□□□□ 0.95
NELFE-204ENST00000436289 ST20-MTHFSA0A0A6YYL1 179 aa20.97■□□□□ 0.95
NELFE-204ENST00000436289 HTRA3P83110 453 aa20.97■□□□□ 0.95
NELFE-204ENST00000436289 DALRD3Q5D0E6 543 aaKnown RBP20.97■□□□□ 0.95
NELFE-204ENST00000436289 ARHGEF1Q92888 912 aaKnown RBP20.97■□□□□ 0.95
NELFE-204ENST00000436289 ATG3Q9NT62 314 aa20.97■□□□□ 0.95
NELFE-204ENST00000436289 KCNA3P22001 575 aa20.96■□□□□ 0.95
NELFE-204ENST00000436289 DCAF5Q96JK2 942 aa20.96■□□□□ 0.95
NELFE-204ENST00000436289 RRAGCQ9HB90 399 aa20.96■□□□□ 0.95
NELFE-204ENST00000436289 ZC3H4Q9UPT8 1303 aaKnown RBP20.96■□□□□ 0.95
NELFE-204ENST00000436289 TONSLQ96HA7 1378 aa20.96■□□□□ 0.95
NELFE-204ENST00000436289 RPS6KA4O75676 772 aa20.95■□□□□ 0.94
NELFE-204ENST00000436289 GYS1P13807 737 aa20.95■□□□□ 0.94
NELFE-204ENST00000436289 PKD1L3Q7Z443 1732 aa20.95■□□□□ 0.94
NELFE-204ENST00000436289 NCAPD2Q15021 1401 aa20.95■□□□□ 0.94
NELFE-204ENST00000436289 RNF181Q9P0P0 153 aa20.94■□□□□ 0.94
NELFE-204ENST00000436289 N4BP2Q86UW6 1770 aaPredicted RBP20.94■□□□□ 0.94
NELFE-204ENST00000436289 PCNTO95613 3336 aa20.94■□□□□ 0.94
NELFE-204ENST00000436289 KIAA1551Q9HCM1 1747 aa20.93■□□□□ 0.94
NELFE-204ENST00000436289 ERVV-2B6SEH9 535 aa20.93■□□□□ 0.94
NELFE-204ENST00000436289 PHKG2P15735 406 aa20.93■□□□□ 0.94
NELFE-204ENST00000436289 CNTNAP4Q9C0A0 1308 aa20.93■□□□□ 0.94
NELFE-204ENST00000436289 CDCA8Q53HL2 280 aa20.92■□□□□ 0.94
NELFE-204ENST00000436289 WASHC2AQ641Q2 1341 aa20.91■□□□□ 0.94
NELFE-204ENST00000436289 KCPQ6ZWJ8 1503 aa20.91■□□□□ 0.94
NELFE-204ENST00000436289 HSP90AB1P08238 724 aaKnown RBP20.9■□□□□ 0.94
NELFE-204ENST00000436289 VEGFAP15692 232 aaPredicted RBP20.9■□□□□ 0.94
NELFE-204ENST00000436289 ARFGEF1Q9Y6D6 1849 aa20.9■□□□□ 0.94
NELFE-204ENST00000436289 C4AP0C0L4 1744 aa20.9■□□□□ 0.94
NELFE-204ENST00000436289 EYA1Q99502 592 aa20.89■□□□□ 0.93
NELFE-204ENST00000436289 RBM42Q9BTD8 480 aaKnown RBP20.89■□□□□ 0.93
NELFE-204ENST00000436289 KDRP35968 1356 aa20.88■□□□□ 0.93
NELFE-204ENST00000436289 EMILIN1Q9Y6C2 1016 aa20.88■□□□□ 0.93
NELFE-204ENST00000436289 ZNF831Q5JPB2 1677 aa20.88■□□□□ 0.93
NELFE-204ENST00000436289 BRCA1P38398 1863 aaKnown RBP20.88■□□□□ 0.93
NELFE-204ENST00000436289 PPM1GO15355 546 aaPredicted RBP20.87■□□□□ 0.93
NELFE-204ENST00000436289 HSPA1AP0DMV8 641 aaKnown RBP20.87■□□□□ 0.93
NELFE-204ENST00000436289 HSPA1BP0DMV9 641 aaKnown RBP20.87■□□□□ 0.93
NELFE-204ENST00000436289 SLC4A9Q96Q91 983 aa20.86■□□□□ 0.93
NELFE-204ENST00000436289 TNRC6CQ9HCJ0 1690 aaKnown RBP20.86■□□□□ 0.93
NELFE-204ENST00000436289 GLTPD2A6NH11 291 aa20.85■□□□□ 0.93
NELFE-204ENST00000436289 LMNB1P20700 586 aa20.83■□□□□ 0.93
NELFE-204ENST00000436289 CABP4P57796 275 aa20.81■□□□□ 0.92
NELFE-204ENST00000436289 USP42Q9H9J4 1324 aaKnown RBP20.8■□□□□ 0.92
NELFE-204ENST00000436289 FKBP8Q14318 412 aa20.8■□□□□ 0.92
NELFE-204ENST00000436289 PLEKHO1Q53GL0 409 aaPredicted RBP20.8■□□□□ 0.92
NELFE-204ENST00000436289 TM4SF1P30408 202 aa20.79■□□□□ 0.92
NELFE-204ENST00000436289 CHRNA5P30532 468 aa20.79■□□□□ 0.92
NELFE-204ENST00000436289 CRKLP46109 303 aaKnown RBP20.79■□□□□ 0.92
NELFE-204ENST00000436289 DDR1Q08345 913 aa20.79■□□□□ 0.92
NELFE-204ENST00000436289 AMOTQ4VCS5 1084 aa20.79■□□□□ 0.92
NELFE-204ENST00000436289 DPY19L2Q6NUT2 758 aa20.79■□□□□ 0.92
NELFE-204ENST00000436289 KDM6AO15550 1401 aaPredicted RBP20.78■□□□□ 0.92
NELFE-204ENST00000436289 KIF20BQ96Q89 1820 aa20.78■□□□□ 0.92
NELFE-204ENST00000436289 SBF1O95248 1867 aa20.78■□□□□ 0.92
NELFE-204ENST00000436289 CARD14Q9BXL6 1004 aa20.78■□□□□ 0.92
NELFE-204ENST00000436289 POLRMTO00411 1230 aaKnown RBP20.77■□□□□ 0.92
NELFE-204ENST00000436289 ZPR1O75312 459 aa20.77■□□□□ 0.92
NELFE-204ENST00000436289 POLKQ9UBT6 870 aa20.77■□□□□ 0.92
NELFE-204ENST00000436289 SRP68Q9UHB9 627 aaKnown RBP20.76■□□□□ 0.91
NELFE-204ENST00000436289 COL5A3P25940 1745 aaPredicted RBP20.75■□□□□ 0.91
NELFE-204ENST00000436289 TTLL6Q8N841 843 aa20.75■□□□□ 0.91
NELFE-204ENST00000436289 CREBZFQ9NS37 354 aa20.75■□□□□ 0.91
NELFE-204ENST00000436289 PTCD1O75127 700 aaKnown RBP20.74■□□□□ 0.91
NELFE-204ENST00000436289 MTHFSP49914 203 aa20.74■□□□□ 0.91
NELFE-204ENST00000436289 EIF4A2Q14240 407 aaKnown RBP20.74■□□□□ 0.91
NELFE-204ENST00000436289 PRDM10Q9NQV6 1147 aa20.73■□□□□ 0.91
NELFE-204ENST00000436289 MYH14Q7Z406 1995 aaKnown RBP20.73■□□□□ 0.91
NELFE-204ENST00000436289 RASSF7Q02833 373 aa20.72■□□□□ 0.91
NELFE-204ENST00000436289 ANKRD26Q9UPS8 1709 aa20.72■□□□□ 0.91
NELFE-204ENST00000436289 C1orf141Q5JVX7 400 aa20.71■□□□□ 0.91
NELFE-204ENST00000436289 ZNF530Q6P9A1 599 aaPredicted RBP20.71■□□□□ 0.91
NELFE-204ENST00000436289 NFATC2IPQ8NCF5 419 aa20.71■□□□□ 0.91
NELFE-204ENST00000436289 PDZRN3Q9UPQ7 1066 aa20.71■□□□□ 0.91
NELFE-204ENST00000436289 INTS5Q6P9B9 1019 aaKnown RBP20.7■□□□□ 0.9
NELFE-204ENST00000436289 H0YIN7 160 aa20.69■□□□□ 0.9
NELFE-204ENST00000436289 SLC34A2O95436 690 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms