RNA–Protein interactions for RNA: ENST00000435505.6

VRK2-206, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 2,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-206ENST00000435505 ATP5J2-PTCD1G3V325 749 aa7.78□□□□□ -1.16
VRK2-206ENST00000435505 MAPK8P45983 427 aa7.78□□□□□ -1.16
VRK2-206ENST00000435505 XPCQ01831 940 aaPredicted RBP7.78□□□□□ -1.16
VRK2-206ENST00000435505 PDE3BQ13370 1112 aa7.78□□□□□ -1.16
VRK2-206ENST00000435505 CHMP4BQ9H444 224 aaKnown RBP7.78□□□□□ -1.16
VRK2-206ENST00000435505 CNTLNQ9NXG0 1405 aa7.78□□□□□ -1.16
VRK2-206ENST00000435505 RAPGEF2Q9Y4G8 1499 aa7.77□□□□□ -1.17
VRK2-206ENST00000435505 FKBP4Q02790 459 aaKnown RBP eCLIP7.77□□□□□ -1.17
VRK2-206ENST00000435505 HSP90AB2PQ58FF8 381 aa7.77□□□□□ -1.17
VRK2-206ENST00000435505 L1TD1Q5T7N2 865 aaKnown RBP7.77□□□□□ -1.17
VRK2-206ENST00000435505 FMNL3Q8IVF7 1028 aa7.77□□□□□ -1.17
VRK2-206ENST00000435505 MRS2Q9HD23 443 aa7.77□□□□□ -1.17
VRK2-206ENST00000435505 DDX56Q9NY93 547 aaKnown RBP7.77□□□□□ -1.17
VRK2-206ENST00000435505 TERF2IPQ9NYB0 399 aa7.77□□□□□ -1.17
VRK2-206ENST00000435505 VTI1BQ9UEU0 232 aa7.77□□□□□ -1.17
VRK2-206ENST00000435505 SETD5Q9C0A6 1442 aa7.77□□□□□ -1.17
VRK2-206ENST00000435505 C6orf229H3BNL8 230 aa7.77□□□□□ -1.17
VRK2-206ENST00000435505 LDHBP07195 334 aaKnown RBP7.77□□□□□ -1.17
VRK2-206ENST00000435505 RNF187Q5TA31 235 aaPredicted RBP7.77□□□□□ -1.17
VRK2-206ENST00000435505 INPP5FQ9Y2H2 1132 aa7.77□□□□□ -1.17
VRK2-206ENST00000435505 SORBS3O60504 671 aa7.76□□□□□ -1.17
VRK2-206ENST00000435505 TBX4P57082 545 aa7.76□□□□□ -1.17
VRK2-206ENST00000435505 ARID5AQ03989 594 aa7.76□□□□□ -1.17
VRK2-206ENST00000435505 SKAP1Q86WV1 359 aa7.76□□□□□ -1.17
VRK2-206ENST00000435505 BMP2KQ9NSY1 1161 aaPredicted RBP7.76□□□□□ -1.17
VRK2-206ENST00000435505 SYNJ1O43426 1573 aa7.76□□□□□ -1.17
VRK2-206ENST00000435505 TREHO43280 583 aa7.76□□□□□ -1.17
VRK2-206ENST00000435505 FMR1Q06787 632 aaKnown RBP eCLIP7.76□□□□□ -1.17
VRK2-206ENST00000435505 NAA30Q147X3 362 aaPredicted RBP7.76□□□□□ -1.17
VRK2-206ENST00000435505 PLPP7Q8NBV4 271 aa7.76□□□□□ -1.17
VRK2-206ENST00000435505 PNMA1Q8ND90 353 aa7.76□□□□□ -1.17
VRK2-206ENST00000435505 MAGEC2Q9UBF1 373 aaPredicted RBP7.76□□□□□ -1.17
VRK2-206ENST00000435505 SFI1A8K8P3 1242 aa7.75□□□□□ -1.17
VRK2-206ENST00000435505 AMPD3Q01432 767 aa7.75□□□□□ -1.17
VRK2-206ENST00000435505 PANK2Q9BZ23 570 aa7.75□□□□□ -1.17
VRK2-206ENST00000435505 FHAD1B1AJZ9 1412 aa7.75□□□□□ -1.17
VRK2-206ENST00000435505 TPM2P07951 284 aa7.74□□□□□ -1.17
VRK2-206ENST00000435505 TMC4Q7Z404 712 aa7.74□□□□□ -1.17
VRK2-206ENST00000435505 EXOC6Q8TAG9 804 aa7.74□□□□□ -1.17
VRK2-206ENST00000435505 CERKQ8TCT0 537 aa7.74□□□□□ -1.17
VRK2-206ENST00000435505 STAC3Q96MF2 364 aa7.74□□□□□ -1.17
VRK2-206ENST00000435505 TMEM134Q9H6X4 195 aa7.74□□□□□ -1.17
VRK2-206ENST00000435505 PNMA2Q9UL42 364 aa7.74□□□□□ -1.17
VRK2-206ENST00000435505 ERBB4Q15303 1308 aa7.74□□□□□ -1.17
VRK2-206ENST00000435505 ZBBXA8MT70 800 aa7.74□□□□□ -1.17
VRK2-206ENST00000435505 PDE6BP35913 854 aa7.74□□□□□ -1.17
VRK2-206ENST00000435505 NUDT18Q6ZVK8 323 aa7.74□□□□□ -1.17
VRK2-206ENST00000435505 NME8Q8N427 588 aa7.74□□□□□ -1.17
VRK2-206ENST00000435505 METTL5Q9NRN9 209 aaKnown RBP7.74□□□□□ -1.17
VRK2-206ENST00000435505 ZHX1Q9UKY1 873 aaPredicted RBP7.74□□□□□ -1.17
VRK2-206ENST00000435505 ZBTB7BO15156 539 aaPredicted RBP7.73□□□□□ -1.17
VRK2-206ENST00000435505 FGRP09769 529 aa7.73□□□□□ -1.17
VRK2-206ENST00000435505 GCGRP47871 477 aa7.73□□□□□ -1.17
VRK2-206ENST00000435505 RAVER1Q8IY67 606 aaKnown RBP7.73□□□□□ -1.17
VRK2-206ENST00000435505 TMTC2Q8N394 836 aa7.73□□□□□ -1.17
VRK2-206ENST00000435505 JDP2Q8WYK2 163 aa7.73□□□□□ -1.17
VRK2-206ENST00000435505 KANSL2Q9H9L4 492 aa7.73□□□□□ -1.17
VRK2-206ENST00000435505 MAFGO15525 162 aa7.73□□□□□ -1.17
VRK2-206ENST00000435505 S100BP04271 92 aaPredicted RBP7.73□□□□□ -1.17
VRK2-206ENST00000435505 XRCC6P12956 609 aaKnown RBP eCLIP7.73□□□□□ -1.17
VRK2-206ENST00000435505 RHBDL3P58872 404 aa7.73□□□□□ -1.17
VRK2-206ENST00000435505 DAB2P98082 770 aa7.73□□□□□ -1.17
VRK2-206ENST00000435505 FKBP5Q13451 457 aaPredicted RBP7.73□□□□□ -1.17
VRK2-206ENST00000435505 GNL2Q13823 731 aaKnown RBP7.73□□□□□ -1.17
VRK2-206ENST00000435505 ZCRB1Q8TBF4 217 aaKnown RBP7.73□□□□□ -1.17
VRK2-206ENST00000435505 BRINP2Q9C0B6 783 aa7.73□□□□□ -1.17
VRK2-206ENST00000435505 PRKRIP1Q9H875 184 aaPredicted RBP7.73□□□□□ -1.17
VRK2-206ENST00000435505 DNAAF2Q9NVR5 837 aaKnown RBP7.73□□□□□ -1.17
VRK2-206ENST00000435505 CEP126Q9P2H0 1117 aa7.73□□□□□ -1.17
VRK2-206ENST00000435505 KDM5BQ9UGL1 1544 aa7.73□□□□□ -1.17
VRK2-206ENST00000435505 PHTF2Q8N3S3 785 aa7.72□□□□□ -1.17
VRK2-206ENST00000435505 TSKSQ9UJT2 592 aa7.72□□□□□ -1.17
VRK2-206ENST00000435505 TONSLQ96HA7 1378 aa7.72□□□□□ -1.17
VRK2-206ENST00000435505 ERICH3Q5RHP9 1530 aa7.72□□□□□ -1.17
VRK2-206ENST00000435505 FOXD4Q12950 439 aaPredicted RBP7.72□□□□□ -1.17
VRK2-206ENST00000435505 RNF135Q8IUD6 432 aa7.72□□□□□ -1.17
VRK2-206ENST00000435505 ADAM33Q9BZ11 813 aa7.72□□□□□ -1.17
VRK2-206ENST00000435505 DDX41Q9UJV9 622 aaKnown RBP7.72□□□□□ -1.17
VRK2-206ENST00000435505 SENP3-EIF4A1A0A087X0R7 540 aa7.71□□□□□ -1.17
VRK2-206ENST00000435505 K7ELQ4 463 aaPredicted RBP7.71□□□□□ -1.17
VRK2-206ENST00000435505 SMAPO00193 183 aa7.71□□□□□ -1.17
VRK2-206ENST00000435505 PSMD2Q13200 908 aa7.71□□□□□ -1.17
VRK2-206ENST00000435505 RNPC3Q96LT9 517 aaKnown RBP7.71□□□□□ -1.17
VRK2-206ENST00000435505 PRPF40AO75400 957 aaKnown RBP7.71□□□□□ -1.18
VRK2-206ENST00000435505 IGHA2P01877 340 aa7.71□□□□□ -1.18
VRK2-206ENST00000435505 RRP1P56182 461 aaKnown RBP7.71□□□□□ -1.18
VRK2-206ENST00000435505 DSC3Q14574 896 aa7.71□□□□□ -1.18
VRK2-206ENST00000435505 JPH4Q96JJ6 628 aa7.71□□□□□ -1.18
VRK2-206ENST00000435505 RBCK1Q9BYM8 510 aa7.71□□□□□ -1.18
VRK2-206ENST00000435505 TTF2Q9UNY4 1162 aaKnown RBP7.71□□□□□ -1.18
VRK2-206ENST00000435505 STK10O94804 968 aaKnown RBP7.7□□□□□ -1.18
VRK2-206ENST00000435505 CTSHP09668 335 aa7.7□□□□□ -1.18
VRK2-206ENST00000435505 DNAJB2P25686 324 aa7.7□□□□□ -1.18
VRK2-206ENST00000435505 TPCN2Q8NHX9 752 aa7.7□□□□□ -1.18
VRK2-206ENST00000435505 IPO4Q8TEX9 1081 aaKnown RBP7.7□□□□□ -1.18
VRK2-206ENST00000435505 DNAJC6O75061 913 aa7.7□□□□□ -1.18
VRK2-206ENST00000435505 SLC10A3P09131 477 aa7.7□□□□□ -1.18
VRK2-206ENST00000435505 XRCC5P13010 732 aaKnown RBP7.7□□□□□ -1.18
VRK2-206ENST00000435505 TIE1P35590 1138 aa7.7□□□□□ -1.18
VRK2-206ENST00000435505 EHHADHQ08426 723 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms