RNA–Protein interactions for RNA: ENST00000434424.5

PTPRK-212, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 3

Gene PTPRK, Length 555 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-212ENST00000434424 KRT76Q01546 638 aa11.53□□□□□ -0.56
PTPRK-212ENST00000434424 PTK2Q05397 1052 aa11.53□□□□□ -0.56
PTPRK-212ENST00000434424 OCSTAMPQ9BR26 566 aa11.53□□□□□ -0.56
PTPRK-212ENST00000434424 GPSM3Q9Y4H4 160 aa11.53□□□□□ -0.56
PTPRK-212ENST00000434424 TTLL8A6PVC2 850 aa11.52□□□□□ -0.57
PTPRK-212ENST00000434424 PDXDC2PQ6P474 469 aa11.52□□□□□ -0.57
PTPRK-212ENST00000434424 ANKMY2Q8IV38 441 aa11.52□□□□□ -0.57
PTPRK-212ENST00000434424 SOWAHDA6NJG2 315 aa11.51□□□□□ -0.57
PTPRK-212ENST00000434424 PTSQ03393 145 aa11.51□□□□□ -0.57
PTPRK-212ENST00000434424 FAM69CQ0P6D2 419 aa11.51□□□□□ -0.57
PTPRK-212ENST00000434424 PLPP7Q8NBV4 271 aa11.51□□□□□ -0.57
PTPRK-212ENST00000434424 ARHGAP9Q9BRR9 750 aa11.51□□□□□ -0.57
PTPRK-212ENST00000434424 SLAIN2Q9P270 581 aa11.51□□□□□ -0.57
PTPRK-212ENST00000434424 PCDHB9Q9Y5E1 797 aa11.51□□□□□ -0.57
PTPRK-212ENST00000434424 RB1CC1Q8TDY2 1594 aa11.5□□□□□ -0.57
PTPRK-212ENST00000434424 ATP2B4P23634 1241 aa11.5□□□□□ -0.57
PTPRK-212ENST00000434424 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.5□□□□□ -0.57
PTPRK-212ENST00000434424 EML3Q32P44 896 aa11.5□□□□□ -0.57
PTPRK-212ENST00000434424 DNAJC14Q6Y2X3 702 aaPredicted RBP11.5□□□□□ -0.57
PTPRK-212ENST00000434424 PHTF2Q8N3S3 785 aa11.5□□□□□ -0.57
PTPRK-212ENST00000434424 FIGNL2A6NMB9 653 aa11.49□□□□□ -0.57
PTPRK-212ENST00000434424 SPINT1O43278 529 aa11.49□□□□□ -0.57
PTPRK-212ENST00000434424 KCTD15Q96SI1 283 aaPredicted RBP11.49□□□□□ -0.57
PTPRK-212ENST00000434424 GSK3AP49840 483 aa11.48□□□□□ -0.57
PTPRK-212ENST00000434424 SWI5Q1ZZU3 235 aa11.48□□□□□ -0.57
PTPRK-212ENST00000434424 MAP7D1Q3KQU3 841 aa11.48□□□□□ -0.57
PTPRK-212ENST00000434424 PGPEP1Q9NXJ5 209 aa11.48□□□□□ -0.57
PTPRK-212ENST00000434424 SERPINB4P48594 390 aa11.47□□□□□ -0.57
PTPRK-212ENST00000434424 DPYDQ12882 1025 aa11.47□□□□□ -0.57
PTPRK-212ENST00000434424 TRIM50Q86XT4 487 aa11.47□□□□□ -0.57
PTPRK-212ENST00000434424 OGFOD1Q8N543 542 aa11.47□□□□□ -0.57
PTPRK-212ENST00000434424 SLC10A4Q96EP9 437 aa11.46□□□□□ -0.57
PTPRK-212ENST00000434424 ATP1A2P50993 1020 aa11.45□□□□□ -0.58
PTPRK-212ENST00000434424 MARSP56192 900 aaKnown RBP11.45□□□□□ -0.58
PTPRK-212ENST00000434424 INTS6LQ5JSJ4 861 aaKnown RBP11.45□□□□□ -0.58
PTPRK-212ENST00000434424 MRRFQ96E11 262 aaKnown RBP11.45□□□□□ -0.58
PTPRK-212ENST00000434424 SIRT1Q96EB6 747 aa11.45□□□□□ -0.58
PTPRK-212ENST00000434424 AGBL1Q96MI9 1066 aa11.45□□□□□ -0.58
PTPRK-212ENST00000434424 BIN2Q9UBW5 565 aaPredicted RBP11.45□□□□□ -0.58
PTPRK-212ENST00000434424 CCDC155Q8N6L0 562 aa11.44□□□□□ -0.58
PTPRK-212ENST00000434424 CNTNAP3BQ96NU0 1288 aa11.44□□□□□ -0.58
PTPRK-212ENST00000434424 CNTNAP3Q9BZ76 1288 aa11.44□□□□□ -0.58
PTPRK-212ENST00000434424 DNAAF2Q9NVR5 837 aaKnown RBP11.44□□□□□ -0.58
PTPRK-212ENST00000434424 CHIC2Q9UKJ5 165 aa11.44□□□□□ -0.58
PTPRK-212ENST00000434424 CTSOP43234 321 aaPredicted RBP11.43□□□□□ -0.58
PTPRK-212ENST00000434424 ZBTB33Q86T24 672 aa11.43□□□□□ -0.58
PTPRK-212ENST00000434424 C1orf216Q8TAB5 229 aa11.43□□□□□ -0.58
PTPRK-212ENST00000434424 NANOS1Q8WY41 292 aaKnown RBP11.43□□□□□ -0.58
PTPRK-212ENST00000434424 ZNF594Q96JF6 807 aaPredicted RBP11.43□□□□□ -0.58
PTPRK-212ENST00000434424 BCL2L13Q9BXK5 485 aa11.43□□□□□ -0.58
PTPRK-212ENST00000434424 USP35Q9P2H5 1018 aa11.43□□□□□ -0.58
PTPRK-212ENST00000434424 CDV3Q9UKY7 258 aaKnown RBP11.43□□□□□ -0.58
PTPRK-212ENST00000434424 NOD1Q9Y239 953 aa11.43□□□□□ -0.58
PTPRK-212ENST00000434424 SLC35F4A4IF30 521 aa11.42□□□□□ -0.58
PTPRK-212ENST00000434424 CLDN10P78369 228 aa11.42□□□□□ -0.58
PTPRK-212ENST00000434424 RNFT1Q5M7Z0 435 aa11.42□□□□□ -0.58
PTPRK-212ENST00000434424 LARGE2Q8N3Y3 721 aa11.42□□□□□ -0.58
PTPRK-212ENST00000434424 IGSF5Q9NSI5 407 aa11.42□□□□□ -0.58
PTPRK-212ENST00000434424 DHX9Q08211 1270 aaKnown RBP11.41□□□□□ -0.58
PTPRK-212ENST00000434424 KCNMA1Q12791 1236 aa11.41□□□□□ -0.58
PTPRK-212ENST00000434424 ADAM32Q8TC27 787 aa11.41□□□□□ -0.58
PTPRK-212ENST00000434424 COL25A1Q9BXS0 654 aaPredicted RBP11.41□□□□□ -0.58
PTPRK-212ENST00000434424 KIAA1522Q9P206 1035 aaPredicted RBP11.41□□□□□ -0.58
PTPRK-212ENST00000434424 ZNF16P17020 682 aaPredicted RBP11.4□□□□□ -0.58
PTPRK-212ENST00000434424 RELBQ01201 579 aa11.4□□□□□ -0.58
PTPRK-212ENST00000434424 NOM1Q5C9Z4 860 aaKnown RBP11.4□□□□□ -0.58
PTPRK-212ENST00000434424 INSM2Q96T92 566 aaPredicted RBP11.4□□□□□ -0.58
PTPRK-212ENST00000434424 RBM19Q9Y4C8 960 aaKnown RBP11.4□□□□□ -0.58
PTPRK-212ENST00000434424 TMPRSS4Q9NRS4 437 aa11.39□□□□□ -0.59
PTPRK-212ENST00000434424 DZIP3Q86Y13 1208 aaKnown RBP11.38□□□□□ -0.59
PTPRK-212ENST00000434424 DOLKQ9UPQ8 538 aa11.38□□□□□ -0.59
PTPRK-212ENST00000434424 PRMT3O60678 531 aa11.37□□□□□ -0.59
PTPRK-212ENST00000434424 SCNN1AP37088 669 aa11.37□□□□□ -0.59
PTPRK-212ENST00000434424 SIX5Q8N196 739 aa11.37□□□□□ -0.59
PTPRK-212ENST00000434424 KDF1Q8NAX2 398 aaPredicted RBP11.37□□□□□ -0.59
PTPRK-212ENST00000434424 RNF217Q8TC41 542 aa11.37□□□□□ -0.59
PTPRK-212ENST00000434424 GIPC2Q8TF65 315 aa11.37□□□□□ -0.59
PTPRK-212ENST00000434424 SENP3-EIF4A1A0A087X0R7 540 aa11.36□□□□□ -0.59
PTPRK-212ENST00000434424 ANKRD33BA6NCL7 494 aa11.36□□□□□ -0.59
PTPRK-212ENST00000434424 ITGA6P23229 1130 aa11.36□□□□□ -0.59
PTPRK-212ENST00000434424 ADD1P35611 737 aaKnown RBP11.36□□□□□ -0.59
PTPRK-212ENST00000434424 SEC13P55735 322 aa11.36□□□□□ -0.59
PTPRK-212ENST00000434424 TSGA10IPQ3SY00 556 aa11.36□□□□□ -0.59
PTPRK-212ENST00000434424 ZNF385CQ66K41 422 aaPredicted RBP11.36□□□□□ -0.59
PTPRK-212ENST00000434424 ZNF784Q8NCA9 323 aaPredicted RBP11.36□□□□□ -0.59
PTPRK-212ENST00000434424 ZNF395Q9H8N7 513 aaPredicted RBP11.36□□□□□ -0.59
PTPRK-212ENST00000434424 EGFL7Q9UHF1 273 aa11.36□□□□□ -0.59
PTPRK-212ENST00000434424 LOC100996750A0A140TA64 210 aa11.35□□□□□ -0.59
PTPRK-212ENST00000434424 ZBTB7BO15156 539 aaPredicted RBP11.35□□□□□ -0.59
PTPRK-212ENST00000434424 LILRA1O75019 489 aa11.35□□□□□ -0.59
PTPRK-212ENST00000434424 ABL1P00519 1130 aa11.35□□□□□ -0.59
PTPRK-212ENST00000434424 GTF2IP78347 998 aa11.35□□□□□ -0.59
PTPRK-212ENST00000434424 ZNF326Q5BKZ1 582 aaKnown RBP11.35□□□□□ -0.59
PTPRK-212ENST00000434424 VWA5B2Q8N398 1253 aa11.35□□□□□ -0.59
PTPRK-212ENST00000434424 KRTAP4-6Q9BYQ5 205 aa11.35□□□□□ -0.59
PTPRK-212ENST00000434424 ADAMTS8Q9UP79 889 aa11.35□□□□□ -0.59
PTPRK-212ENST00000434424 DKK1O94907 266 aa11.34□□□□□ -0.59
PTPRK-212ENST00000434424 OXLD1Q5BKU9 147 aa11.34□□□□□ -0.59
PTPRK-212ENST00000434424 TAS1R3Q7RTX0 852 aa11.34□□□□□ -0.59
PTPRK-212ENST00000434424 WHAMMQ8TF30 809 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms