RNA–Protein interactions for RNA: ENST00000428240.1

ITSN1-216, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 213 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-216ENST00000428240 KIF13BQ9NQT8 1826 aa11.47□□□□□ -0.57
ITSN1-216ENST00000428240 WDR90Q96KV7 1748 aa11.47□□□□□ -0.57
ITSN1-216ENST00000428240 CAPN15O75808 1086 aa11.47□□□□□ -0.57
ITSN1-216ENST00000428240 FCHSD2O94868 740 aa11.47□□□□□ -0.57
ITSN1-216ENST00000428240 DPEP1P16444 411 aa11.47□□□□□ -0.57
ITSN1-216ENST00000428240 JMYQ8N9B5 988 aa11.47□□□□□ -0.57
ITSN1-216ENST00000428240 RBM46Q8TBY0 533 aaKnown RBP11.47□□□□□ -0.57
ITSN1-216ENST00000428240 ATG3Q9NT62 314 aa11.47□□□□□ -0.57
ITSN1-216ENST00000428240 TMOD3Q9NYL9 352 aa11.47□□□□□ -0.57
ITSN1-216ENST00000428240 NCAPD2Q15021 1401 aa11.46□□□□□ -0.57
ITSN1-216ENST00000428240 KIF24Q5T7B8 1368 aa11.46□□□□□ -0.57
ITSN1-216ENST00000428240 KCNA3P22001 575 aa11.46□□□□□ -0.57
ITSN1-216ENST00000428240 TMF1P82094 1093 aa11.46□□□□□ -0.57
ITSN1-216ENST00000428240 TRAPPC3LQ5T215 181 aa11.46□□□□□ -0.57
ITSN1-216ENST00000428240 C9orf131Q5VYM1 1079 aa11.46□□□□□ -0.57
ITSN1-216ENST00000428240 SLC4A9Q96Q91 983 aa11.46□□□□□ -0.57
ITSN1-216ENST00000428240 SPG7Q9UQ90 795 aa11.46□□□□□ -0.57
ITSN1-216ENST00000428240 GYS1P13807 737 aa11.45□□□□□ -0.58
ITSN1-216ENST00000428240 PHKG2P15735 406 aa11.45□□□□□ -0.58
ITSN1-216ENST00000428240 NLGN1Q8N2Q7 840 aa11.45□□□□□ -0.58
ITSN1-216ENST00000428240 ARHGEF1Q92888 912 aaKnown RBP11.45□□□□□ -0.58
ITSN1-216ENST00000428240 RTCBQ9Y3I0 505 aaKnown RBP11.45□□□□□ -0.58
ITSN1-216ENST00000428240 KDRP35968 1356 aa11.44□□□□□ -0.58
ITSN1-216ENST00000428240 PPM1GO15355 546 aaPredicted RBP11.44□□□□□ -0.58
ITSN1-216ENST00000428240 C16orf71Q8IYS4 520 aaPredicted RBP11.44□□□□□ -0.58
ITSN1-216ENST00000428240 EYA1Q99502 592 aa11.44□□□□□ -0.58
ITSN1-216ENST00000428240 CCDC87Q9NVE4 849 aa11.44□□□□□ -0.58
ITSN1-216ENST00000428240 KCPQ6ZWJ8 1503 aa11.44□□□□□ -0.58
ITSN1-216ENST00000428240 TONSLQ96HA7 1378 aa11.43□□□□□ -0.58
ITSN1-216ENST00000428240 FSTL1Q12841 308 aa11.43□□□□□ -0.58
ITSN1-216ENST00000428240 IFNL2Q8IZJ0 200 aa11.43□□□□□ -0.58
ITSN1-216ENST00000428240 TNS4Q8IZW8 715 aa11.43□□□□□ -0.58
ITSN1-216ENST00000428240 CARD14Q9BXL6 1004 aa11.43□□□□□ -0.58
ITSN1-216ENST00000428240 RRAGCQ9HB90 399 aa11.43□□□□□ -0.58
ITSN1-216ENST00000428240 C4AP0C0L4 1744 aa11.43□□□□□ -0.58
ITSN1-216ENST00000428240 PLEKHG2Q9H7P9 1386 aa11.42□□□□□ -0.58
ITSN1-216ENST00000428240 SLC24A1O60721 1099 aa11.42□□□□□ -0.58
ITSN1-216ENST00000428240 RBM42Q9BTD8 480 aaKnown RBP11.42□□□□□ -0.58
ITSN1-216ENST00000428240 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.42□□□□□ -0.58
ITSN1-216ENST00000428240 PARP3Q9Y6F1 533 aa11.42□□□□□ -0.58
ITSN1-216ENST00000428240 ADRA2BP18089 450 aa11.41□□□□□ -0.58
ITSN1-216ENST00000428240 RFC4P35249 363 aa11.41□□□□□ -0.58
ITSN1-216ENST00000428240 RC3H1Q5TC82 1133 aaKnown RBP11.41□□□□□ -0.58
ITSN1-216ENST00000428240 DCAF5Q96JK2 942 aa11.41□□□□□ -0.58
ITSN1-216ENST00000428240 RNF181Q9P0P0 153 aa11.41□□□□□ -0.58
ITSN1-216ENST00000428240 PIM2Q9P1W9 311 aa11.41□□□□□ -0.58
ITSN1-216ENST00000428240 KIF20BQ96Q89 1820 aa11.41□□□□□ -0.58
ITSN1-216ENST00000428240 BRCA1P38398 1863 aaKnown RBP11.4□□□□□ -0.58
ITSN1-216ENST00000428240 WASHC2AQ641Q2 1341 aa11.4□□□□□ -0.58
ITSN1-216ENST00000428240 KDM2BQ8NHM5 1336 aa11.4□□□□□ -0.58
ITSN1-216ENST00000428240 CNTNAP4Q9C0A0 1308 aa11.4□□□□□ -0.58
ITSN1-216ENST00000428240 RPS6KA4O75676 772 aa11.4□□□□□ -0.58
ITSN1-216ENST00000428240 PRELPP51888 382 aa11.4□□□□□ -0.58
ITSN1-216ENST00000428240 CHRNA5P30532 468 aa11.39□□□□□ -0.59
ITSN1-216ENST00000428240 DALRD3Q5D0E6 543 aaKnown RBP11.39□□□□□ -0.59
ITSN1-216ENST00000428240 SRP68Q9UHB9 627 aaKnown RBP11.39□□□□□ -0.59
ITSN1-216ENST00000428240 DDR1Q08345 913 aa11.38□□□□□ -0.59
ITSN1-216ENST00000428240 FKBP8Q14318 412 aa11.38□□□□□ -0.59
ITSN1-216ENST00000428240 SMC1BQ8NDV3 1235 aa11.38□□□□□ -0.59
ITSN1-216ENST00000428240 POLKQ9UBT6 870 aa11.38□□□□□ -0.59
ITSN1-216ENST00000428240 COL5A3P25940 1745 aaPredicted RBP11.38□□□□□ -0.59
ITSN1-216ENST00000428240 ANKRD26Q9UPS8 1709 aa11.38□□□□□ -0.59
ITSN1-216ENST00000428240 ERVV-2B6SEH9 535 aa11.37□□□□□ -0.59
ITSN1-216ENST00000428240 HSPA1AP0DMV8 641 aaKnown RBP11.37□□□□□ -0.59
ITSN1-216ENST00000428240 HSPA1BP0DMV9 641 aaKnown RBP11.37□□□□□ -0.59
ITSN1-216ENST00000428240 EIF4A2Q14240 407 aaKnown RBP11.37□□□□□ -0.59
ITSN1-216ENST00000428240 ARFGEF1Q9Y6D6 1849 aa11.37□□□□□ -0.59
ITSN1-216ENST00000428240 ZNF831Q5JPB2 1677 aa11.36□□□□□ -0.59
ITSN1-216ENST00000428240 PTCD1O75127 700 aaKnown RBP11.36□□□□□ -0.59
ITSN1-216ENST00000428240 CRKLP46109 303 aaKnown RBP11.36□□□□□ -0.59
ITSN1-216ENST00000428240 RASSF7Q02833 373 aa11.36□□□□□ -0.59
ITSN1-216ENST00000428240 TNRC6CQ9HCJ0 1690 aaKnown RBP11.36□□□□□ -0.59
ITSN1-216ENST00000428240 USP42Q9H9J4 1324 aaKnown RBP11.35□□□□□ -0.59
ITSN1-216ENST00000428240 KDM6AO15550 1401 aaPredicted RBP11.35□□□□□ -0.59
ITSN1-216ENST00000428240 POLRMTO00411 1230 aaKnown RBP11.35□□□□□ -0.59
ITSN1-216ENST00000428240 TM4SF1P30408 202 aa11.34□□□□□ -0.59
ITSN1-216ENST00000428240 CABP4P57796 275 aa11.34□□□□□ -0.59
ITSN1-216ENST00000428240 MYH14Q7Z406 1995 aaKnown RBP11.34□□□□□ -0.59
ITSN1-216ENST00000428240 HSP90AB1P08238 724 aaKnown RBP11.33□□□□□ -0.6
ITSN1-216ENST00000428240 TNNT2P45379 298 aaPredicted RBP11.33□□□□□ -0.6
ITSN1-216ENST00000428240 CDCA8Q53HL2 280 aa11.33□□□□□ -0.6
ITSN1-216ENST00000428240 GLTPD2A6NH11 291 aa11.32□□□□□ -0.6
ITSN1-216ENST00000428240 VEGFAP15692 232 aaPredicted RBP11.32□□□□□ -0.6
ITSN1-216ENST00000428240 LMNB1P20700 586 aa11.32□□□□□ -0.6
ITSN1-216ENST00000428240 ZNF530Q6P9A1 599 aaPredicted RBP11.32□□□□□ -0.6
ITSN1-216ENST00000428240 INTS5Q6P9B9 1019 aaKnown RBP11.32□□□□□ -0.6
ITSN1-216ENST00000428240 NFATC2IPQ8NCF5 419 aa11.32□□□□□ -0.6
ITSN1-216ENST00000428240 ZC3H4Q9UPT8 1303 aaKnown RBP11.32□□□□□ -0.6
ITSN1-216ENST00000428240 SBF1O95248 1867 aa11.32□□□□□ -0.6
ITSN1-216ENST00000428240 ADAMTS7Q9UKP4 1686 aa11.31□□□□□ -0.6
ITSN1-216ENST00000428240 MTHFSP49914 203 aa11.31□□□□□ -0.6
ITSN1-216ENST00000428240 PLEKHO1Q53GL0 409 aaPredicted RBP11.31□□□□□ -0.6
ITSN1-216ENST00000428240 USPL1Q5W0Q7 1092 aa11.31□□□□□ -0.6
ITSN1-216ENST00000428240 TJP1Q07157 1748 aa11.3□□□□□ -0.6
ITSN1-216ENST00000428240 POTECB2RU33 542 aa11.3□□□□□ -0.6
ITSN1-216ENST00000428240 NFKBIEO00221 500 aa11.29□□□□□ -0.6
ITSN1-216ENST00000428240 ZPR1O75312 459 aa11.29□□□□□ -0.6
ITSN1-216ENST00000428240 NFIXQ14938 502 aa11.29□□□□□ -0.6
ITSN1-216ENST00000428240 AMOTQ4VCS5 1084 aa11.29□□□□□ -0.6
ITSN1-216ENST00000428240 AEBP1Q8IUX7 1158 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms