RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 ZSCAN10Q96SZ4 725 aaPredicted RBP10.68□□□□□ -0.7
LINC00458-202ENST00000427299 A0A1B0GTH6 734 aa10.67□□□□□ -0.7
LINC00458-202ENST00000427299 IRF5Q13568 498 aa10.67□□□□□ -0.7
LINC00458-202ENST00000427299 TSGA10IPQ3SY00 556 aa10.67□□□□□ -0.7
LINC00458-202ENST00000427299 CFHR5Q9BXR6 569 aa10.67□□□□□ -0.7
LINC00458-202ENST00000427299 GPAMQ9HCL2 828 aa10.67□□□□□ -0.7
LINC00458-202ENST00000427299 NSFL1CQ9UNZ2 370 aaKnown RBP10.67□□□□□ -0.7
LINC00458-202ENST00000427299 PHF20L1A8MW92 1017 aa10.66□□□□□ -0.7
LINC00458-202ENST00000427299 PHKA2P46019 1235 aa10.66□□□□□ -0.7
LINC00458-202ENST00000427299 UBAP2LQ14157 1087 aaKnown RBP10.66□□□□□ -0.7
LINC00458-202ENST00000427299 NEDD1Q8NHV4 660 aa10.66□□□□□ -0.7
LINC00458-202ENST00000427299 EIF4G2P78344 907 aaKnown RBP eCLIP10.65□□□□□ -0.7
LINC00458-202ENST00000427299 C4orf17Q53FE4 359 aa10.65□□□□□ -0.7
LINC00458-202ENST00000427299 ESCO1Q5FWF5 840 aa10.65□□□□□ -0.7
LINC00458-202ENST00000427299 BEND7Q8N7W2 519 aaPredicted RBP10.65□□□□□ -0.7
LINC00458-202ENST00000427299 DOLKQ9UPQ8 538 aa10.65□□□□□ -0.7
LINC00458-202ENST00000427299 OIP5O43482 229 aa10.64□□□□□ -0.71
LINC00458-202ENST00000427299 MAP2K3P46734 347 aa10.64□□□□□ -0.71
LINC00458-202ENST00000427299 GNASQ5JWF2 1037 aa10.64□□□□□ -0.71
LINC00458-202ENST00000427299 DCAF5Q96JK2 942 aa10.64□□□□□ -0.71
LINC00458-202ENST00000427299 OXCT2Q9BYC2 517 aaPredicted RBP10.64□□□□□ -0.71
LINC00458-202ENST00000427299 CHIC2Q9UKJ5 165 aa10.64□□□□□ -0.71
LINC00458-202ENST00000427299 USP4Q13107 963 aa10.63□□□□□ -0.71
LINC00458-202ENST00000427299 LBRQ14739 615 aaKnown RBP10.63□□□□□ -0.71
LINC00458-202ENST00000427299 TMEM214Q6NUQ4 689 aaKnown RBP10.63□□□□□ -0.71
LINC00458-202ENST00000427299 PODNQ7Z5L7 613 aa10.63□□□□□ -0.71
LINC00458-202ENST00000427299 ETNK1Q9HBU6 452 aa10.63□□□□□ -0.71
LINC00458-202ENST00000427299 STAU1O95793 577 aaKnown RBP10.62□□□□□ -0.71
LINC00458-202ENST00000427299 ITGB2P05107 769 aa10.61□□□□□ -0.71
LINC00458-202ENST00000427299 MSX1P28360 303 aa10.61□□□□□ -0.71
LINC00458-202ENST00000427299 PLA2G4EQ3MJ16 856 aa10.61□□□□□ -0.71
LINC00458-202ENST00000427299 SLFNL1Q499Z3 407 aa10.61□□□□□ -0.71
LINC00458-202ENST00000427299 RNF135Q8IUD6 432 aa10.61□□□□□ -0.71
LINC00458-202ENST00000427299 RUBCNLQ9H714 662 aa10.61□□□□□ -0.71
LINC00458-202ENST00000427299 PRM3Q9NNZ6 103 aa10.61□□□□□ -0.71
LINC00458-202ENST00000427299 PHF24Q9UPV7 400 aa10.61□□□□□ -0.71
LINC00458-202ENST00000427299 GTF2E1P29083 439 aaPredicted RBP10.6□□□□□ -0.71
LINC00458-202ENST00000427299 PPARGC1BQ86YN6 1023 aaKnown RBP10.6□□□□□ -0.71
LINC00458-202ENST00000427299 RHBDD1Q8TEB9 315 aa10.6□□□□□ -0.71
LINC00458-202ENST00000427299 KLRG1Q96E93 195 aa10.59□□□□□ -0.71
LINC00458-202ENST00000427299 SHISA8B8ZZ34 492 aa10.58□□□□□ -0.72
LINC00458-202ENST00000427299 CSB-PGBD3P0DP91 1061 aa10.58□□□□□ -0.72
LINC00458-202ENST00000427299 SCNN1DP51172 638 aa10.58□□□□□ -0.72
LINC00458-202ENST00000427299 VAC14Q08AM6 782 aa10.58□□□□□ -0.72
LINC00458-202ENST00000427299 TLR1Q15399 786 aa10.58□□□□□ -0.72
LINC00458-202ENST00000427299 OXLD1Q5BKU9 147 aa10.58□□□□□ -0.72
LINC00458-202ENST00000427299 C1orf229Q6ZS94 237 aaPredicted RBP10.58□□□□□ -0.72
LINC00458-202ENST00000427299 PGBD3Q8N328 593 aa10.58□□□□□ -0.72
LINC00458-202ENST00000427299 NDFIP2Q9NV92 336 aa10.58□□□□□ -0.72
LINC00458-202ENST00000427299 SNRPNP63162 240 aaKnown RBP10.57□□□□□ -0.72
LINC00458-202ENST00000427299 CRISPLD1Q9H336 500 aa10.57□□□□□ -0.72
LINC00458-202ENST00000427299 ATXN7L1Q9ULK2 861 aaPredicted RBP10.57□□□□□ -0.72
LINC00458-202ENST00000427299 EFHC2Q5JST6 749 aa10.56□□□□□ -0.72
LINC00458-202ENST00000427299 SIRT1Q96EB6 747 aa10.56□□□□□ -0.72
LINC00458-202ENST00000427299 SPOCK3Q9BQ16 436 aa10.56□□□□□ -0.72
LINC00458-202ENST00000427299 GDPD2Q9HCC8 539 aa10.56□□□□□ -0.72
LINC00458-202ENST00000427299 GDF2Q9UK05 429 aaPredicted RBP10.56□□□□□ -0.72
LINC00458-202ENST00000427299 MSTNO14793 375 aa10.55□□□□□ -0.72
LINC00458-202ENST00000427299 TPRNQ4KMQ1 711 aa10.55□□□□□ -0.72
LINC00458-202ENST00000427299 GALNT6Q8NCL4 622 aa10.55□□□□□ -0.72
LINC00458-202ENST00000427299 ABHD17AQ96GS6 310 aa10.55□□□□□ -0.72
LINC00458-202ENST00000427299 C2CD2LO14523 706 aa10.54□□□□□ -0.72
LINC00458-202ENST00000427299 INHAP05111 366 aa10.54□□□□□ -0.72
LINC00458-202ENST00000427299 BNIP3LO60238 219 aa10.53□□□□□ -0.72
LINC00458-202ENST00000427299 PROCP04070 461 aa10.53□□□□□ -0.72
LINC00458-202ENST00000427299 ATP4AP20648 1035 aa10.53□□□□□ -0.72
LINC00458-202ENST00000427299 FGFR3P22607 806 aa10.53□□□□□ -0.72
LINC00458-202ENST00000427299 PLA2G4AP47712 749 aa10.53□□□□□ -0.72
LINC00458-202ENST00000427299 GDF10P55107 478 aa10.53□□□□□ -0.72
LINC00458-202ENST00000427299 MAP7D1Q3KQU3 841 aa10.53□□□□□ -0.72
LINC00458-202ENST00000427299 GOLGA6L1Q8N7Z2 621 aa10.53□□□□□ -0.72
LINC00458-202ENST00000427299 BMP4P12644 408 aa10.52□□□□□ -0.73
LINC00458-202ENST00000427299 TBC1D9Q6ZT07 1266 aa10.52□□□□□ -0.73
LINC00458-202ENST00000427299 EDARADDQ8WWZ3 215 aa10.52□□□□□ -0.73
LINC00458-202ENST00000427299 DNAAF2Q9NVR5 837 aaKnown RBP10.52□□□□□ -0.73
LINC00458-202ENST00000427299 HOXB4P17483 251 aaPredicted RBP10.51□□□□□ -0.73
LINC00458-202ENST00000427299 ABL2P42684 1182 aa10.51□□□□□ -0.73
LINC00458-202ENST00000427299 CTBSQ01459 385 aa10.51□□□□□ -0.73
LINC00458-202ENST00000427299 WASHC4Q2M389 1173 aa10.51□□□□□ -0.73
LINC00458-202ENST00000427299 SLCO4C1Q6ZQN7 724 aa10.51□□□□□ -0.73
LINC00458-202ENST00000427299 ZNF295-AS1Q8N0V1 137 aa10.51□□□□□ -0.73
LINC00458-202ENST00000427299 PLPP7Q8NBV4 271 aa10.51□□□□□ -0.73
LINC00458-202ENST00000427299 MKL2Q9ULH7 1088 aa10.51□□□□□ -0.73
LINC00458-202ENST00000427299 C1orf216Q8TAB5 229 aa10.5□□□□□ -0.73
LINC00458-202ENST00000427299 SMTNP53814 917 aa10.49□□□□□ -0.73
LINC00458-202ENST00000427299 FIGNL1Q6PIW4 674 aa10.49□□□□□ -0.73
LINC00458-202ENST00000427299 NIFKQ9BYG3 293 aaKnown RBP10.49□□□□□ -0.73
LINC00458-202ENST00000427299 GGA1Q9UJY5 639 aa10.49□□□□□ -0.73
LINC00458-202ENST00000427299 COL8A1P27658 744 aa10.48□□□□□ -0.73
LINC00458-202ENST00000427299 NLRP8Q86W28 1048 aa10.48□□□□□ -0.73
LINC00458-202ENST00000427299 ZCCHC2Q9C0B9 1178 aaKnown RBP10.48□□□□□ -0.73
LINC00458-202ENST00000427299 PCDHGC4Q9Y5F7 938 aa10.48□□□□□ -0.73
LINC00458-202ENST00000427299 KRBA1A5PL33 1030 aa10.47□□□□□ -0.73
LINC00458-202ENST00000427299 TMEM229AB2RXF0 380 aa10.47□□□□□ -0.73
LINC00458-202ENST00000427299 ADAM23O75077 832 aa10.47□□□□□ -0.73
LINC00458-202ENST00000427299 SOX11P35716 441 aa10.47□□□□□ -0.73
LINC00458-202ENST00000427299 MCM6Q14566 821 aa10.47□□□□□ -0.73
LINC00458-202ENST00000427299 ALYREFQ86V81 257 aaKnown RBP10.47□□□□□ -0.73
LINC00458-202ENST00000427299 SLC4A9Q96Q91 983 aa10.47□□□□□ -0.73
LINC00458-202ENST00000427299 RRAGCQ9HB90 399 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms