RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 ITGB4P16144 1822 aa20.33■□□□□ 0.85
PDAP1-202ENST00000426447 TOMM70O94826 608 aa20.33■□□□□ 0.85
PDAP1-202ENST00000426447 PHKG2P15735 406 aa20.33■□□□□ 0.85
PDAP1-202ENST00000426447 TOGARAM1Q9Y4F4 1720 aa20.33■□□□□ 0.84
PDAP1-202ENST00000426447 UBR3Q6ZT12 1888 aa20.33■□□□□ 0.84
PDAP1-202ENST00000426447 RBM42Q9BTD8 480 aaKnown RBP20.32■□□□□ 0.84
PDAP1-202ENST00000426447 CCDC87Q9NVE4 849 aa20.31■□□□□ 0.84
PDAP1-202ENST00000426447 FCHSD2O94868 740 aa20.3■□□□□ 0.84
PDAP1-202ENST00000426447 RFC4P35249 363 aa20.29■□□□□ 0.84
PDAP1-202ENST00000426447 PARP3Q9Y6F1 533 aa20.29■□□□□ 0.84
PDAP1-202ENST00000426447 PKD1L3Q7Z443 1732 aa20.29■□□□□ 0.84
PDAP1-202ENST00000426447 KIF20BQ96Q89 1820 aa20.29■□□□□ 0.84
PDAP1-202ENST00000426447 DPEP1P16444 411 aa20.28■□□□□ 0.84
PDAP1-202ENST00000426447 ARHGEF1Q92888 912 aaKnown RBP20.28■□□□□ 0.84
PDAP1-202ENST00000426447 PXDNLA1KZ92 1463 aa20.28■□□□□ 0.84
PDAP1-202ENST00000426447 NCAPD2Q15021 1401 aa20.27■□□□□ 0.84
PDAP1-202ENST00000426447 C16orf71Q8IYS4 520 aaPredicted RBP20.27■□□□□ 0.84
PDAP1-202ENST00000426447 NMRK2Q9NPI5 230 aa20.27■□□□□ 0.84
PDAP1-202ENST00000426447 POLKQ9UBT6 870 aa20.27■□□□□ 0.84
PDAP1-202ENST00000426447 MAP2P11137 1827 aaKnown RBP20.26■□□□□ 0.83
PDAP1-202ENST00000426447 ERVV-2B6SEH9 535 aa20.26■□□□□ 0.83
PDAP1-202ENST00000426447 ADRA2BP18089 450 aa20.26■□□□□ 0.83
PDAP1-202ENST00000426447 TNNT2P45379 298 aaPredicted RBP20.26■□□□□ 0.83
PDAP1-202ENST00000426447 RC3H1Q5TC82 1133 aaKnown RBP20.26■□□□□ 0.83
PDAP1-202ENST00000426447 HSP90AB1P08238 724 aaKnown RBP20.25■□□□□ 0.83
PDAP1-202ENST00000426447 DNAJC5GQ8N7S2 189 aa20.25■□□□□ 0.83
PDAP1-202ENST00000426447 RPS6KA4O75676 772 aa20.24■□□□□ 0.83
PDAP1-202ENST00000426447 GYS1P13807 737 aa20.24■□□□□ 0.83
PDAP1-202ENST00000426447 EIF4A2Q14240 407 aaKnown RBP20.24■□□□□ 0.83
PDAP1-202ENST00000426447 DCAF5Q96JK2 942 aa20.24■□□□□ 0.83
PDAP1-202ENST00000426447 SLC4A9Q96Q91 983 aa20.24■□□□□ 0.83
PDAP1-202ENST00000426447 CICQ96RK0 1608 aaPredicted RBP20.24■□□□□ 0.83
PDAP1-202ENST00000426447 CABP4P57796 275 aa20.23■□□□□ 0.83
PDAP1-202ENST00000426447 C9orf131Q5VYM1 1079 aa20.23■□□□□ 0.83
PDAP1-202ENST00000426447 POLR3GLQ9BT43 218 aa20.23■□□□□ 0.83
PDAP1-202ENST00000426447 PLEKHO1Q53GL0 409 aaPredicted RBP20.22■□□□□ 0.83
PDAP1-202ENST00000426447 PIM2Q9P1W9 311 aa20.22■□□□□ 0.83
PDAP1-202ENST00000426447 C10orf71Q711Q0 1435 aa20.21■□□□□ 0.83
PDAP1-202ENST00000426447 RBM46Q8TBY0 533 aaKnown RBP20.21■□□□□ 0.83
PDAP1-202ENST00000426447 CNTNAP4Q9C0A0 1308 aa20.21■□□□□ 0.83
PDAP1-202ENST00000426447 KDRP35968 1356 aa20.21■□□□□ 0.83
PDAP1-202ENST00000426447 N4BP2Q86UW6 1770 aaPredicted RBP20.2■□□□□ 0.82
PDAP1-202ENST00000426447 PTCD1O75127 700 aaKnown RBP20.19■□□□□ 0.82
PDAP1-202ENST00000426447 KCNA3P22001 575 aa20.19■□□□□ 0.82
PDAP1-202ENST00000426447 DALRD3Q5D0E6 543 aaKnown RBP20.19■□□□□ 0.82
PDAP1-202ENST00000426447 ZNF530Q6P9A1 599 aaPredicted RBP20.19■□□□□ 0.82
PDAP1-202ENST00000426447 MTHFSP49914 203 aa20.18■□□□□ 0.82
PDAP1-202ENST00000426447 KDM2BQ8NHM5 1336 aa20.18■□□□□ 0.82
PDAP1-202ENST00000426447 AMOTQ4VCS5 1084 aa20.17■□□□□ 0.82
PDAP1-202ENST00000426447 RNF181Q9P0P0 153 aa20.17■□□□□ 0.82
PDAP1-202ENST00000426447 KIF13BQ9NQT8 1826 aa20.16■□□□□ 0.82
PDAP1-202ENST00000426447 HTRA3P83110 453 aa20.16■□□□□ 0.82
PDAP1-202ENST00000426447 FSTL1Q12841 308 aa20.16■□□□□ 0.82
PDAP1-202ENST00000426447 C1orf141Q5JVX7 400 aa20.16■□□□□ 0.82
PDAP1-202ENST00000426447 RRAGCQ9HB90 399 aa20.16■□□□□ 0.82
PDAP1-202ENST00000426447 SRP68Q9UHB9 627 aaKnown RBP20.16■□□□□ 0.82
PDAP1-202ENST00000426447 PLEKHG2Q9H7P9 1386 aa20.16■□□□□ 0.82
PDAP1-202ENST00000426447 CRKLP46109 303 aaKnown RBP20.15■□□□□ 0.82
PDAP1-202ENST00000426447 NFATC2IPQ8NCF5 419 aa20.15■□□□□ 0.82
PDAP1-202ENST00000426447 KLRG1Q96E93 195 aa20.15■□□□□ 0.82
PDAP1-202ENST00000426447 C4AP0C0L4 1744 aa20.15■□□□□ 0.82
PDAP1-202ENST00000426447 FKBP8Q14318 412 aa20.14■□□□□ 0.81
PDAP1-202ENST00000426447 KIAA1551Q9HCM1 1747 aa20.13■□□□□ 0.81
PDAP1-202ENST00000426447 CHRNA5P30532 468 aa20.13■□□□□ 0.81
PDAP1-202ENST00000426447 ANKRD26Q9UPS8 1709 aa20.13■□□□□ 0.81
PDAP1-202ENST00000426447 USP42Q9H9J4 1324 aaKnown RBP20.12■□□□□ 0.81
PDAP1-202ENST00000426447 ZPR1O75312 459 aa20.11■□□□□ 0.81
PDAP1-202ENST00000426447 DDR1Q08345 913 aa20.11■□□□□ 0.81
PDAP1-202ENST00000426447 KCPQ6ZWJ8 1503 aa20.11■□□□□ 0.81
PDAP1-202ENST00000426447 KDM6AO15550 1401 aaPredicted RBP20.1■□□□□ 0.81
PDAP1-202ENST00000426447 COL13A1Q5TAT6 717 aaPredicted RBP20.09■□□□□ 0.81
PDAP1-202ENST00000426447 JMYQ8N9B5 988 aa20.09■□□□□ 0.81
PDAP1-202ENST00000426447 ZNF831Q5JPB2 1677 aa20.09■□□□□ 0.81
PDAP1-202ENST00000426447 AEBP1Q8IUX7 1158 aa20.08■□□□□ 0.81
PDAP1-202ENST00000426447 SMC1BQ8NDV3 1235 aa20.08■□□□□ 0.81
PDAP1-202ENST00000426447 POLRMTO00411 1230 aaKnown RBP20.07■□□□□ 0.8
PDAP1-202ENST00000426447 CAPN15O75808 1086 aa20.07■□□□□ 0.8
PDAP1-202ENST00000426447 TM4SF1P30408 202 aa20.07■□□□□ 0.8
PDAP1-202ENST00000426447 USPL1Q5W0Q7 1092 aa20.07■□□□□ 0.8
PDAP1-202ENST00000426447 SULT6B1Q6IMI4 303 aa20.07■□□□□ 0.8
PDAP1-202ENST00000426447 INTS5Q6P9B9 1019 aaKnown RBP20.07■□□□□ 0.8
PDAP1-202ENST00000426447 COL5A3P25940 1745 aaPredicted RBP20.06■□□□□ 0.8
PDAP1-202ENST00000426447 MORC1Q86VD1 984 aa20.06■□□□□ 0.8
PDAP1-202ENST00000426447 WDR90Q96KV7 1748 aa20.06■□□□□ 0.8
PDAP1-202ENST00000426447 PANK3Q9H999 370 aa20.06■□□□□ 0.8
PDAP1-202ENST00000426447 DNAJC10Q8IXB1 793 aa20.05■□□□□ 0.8
PDAP1-202ENST00000426447 RASSF7Q02833 373 aa20.04■□□□□ 0.8
PDAP1-202ENST00000426447 TNS4Q8IZW8 715 aa20.04■□□□□ 0.8
PDAP1-202ENST00000426447 TIMELESSQ9UNS1 1208 aa20.04■□□□□ 0.8
PDAP1-202ENST00000426447 VEGFAP15692 232 aaPredicted RBP20.03■□□□□ 0.8
PDAP1-202ENST00000426447 ARFGEF1Q9Y6D6 1849 aa20.03■□□□□ 0.8
PDAP1-202ENST00000426447 BRCA1P38398 1863 aaKnown RBP20.03■□□□□ 0.8
PDAP1-202ENST00000426447 MYH14Q7Z406 1995 aaKnown RBP20.03■□□□□ 0.8
PDAP1-202ENST00000426447 LMNB1P20700 586 aa20.02■□□□□ 0.8
PDAP1-202ENST00000426447 NFIXQ14938 502 aa20.01■□□□□ 0.79
PDAP1-202ENST00000426447 AKAP4Q5JQC9 854 aa20.01■□□□□ 0.79
PDAP1-202ENST00000426447 ZC3H4Q9UPT8 1303 aaKnown RBP20.01■□□□□ 0.79
PDAP1-202ENST00000426447 GLTPD2A6NH11 291 aa20■□□□□ 0.79
PDAP1-202ENST00000426447 TTLL6Q8N841 843 aa20■□□□□ 0.79
PDAP1-202ENST00000426447 SLC52A2Q9HAB3 445 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms