RNA–Protein interactions for RNA: ENST00000424011.6

CMTM3-202, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CMTM3, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-202ENST00000424011 BRPF3Q9ULD4 1205 aa20.79■□□□□ 0.92
CMTM3-202ENST00000424011 ABCC6O95255 1503 aa20.79■□□□□ 0.92
CMTM3-202ENST00000424011 AEBP2Q6ZN18 517 aaPredicted RBP20.78■□□□□ 0.92
CMTM3-202ENST00000424011 OVOS2A0A0G2JMS6 1433 aa20.77■□□□□ 0.92
CMTM3-202ENST00000424011 ROBO1Q9Y6N7 1651 aa20.77■□□□□ 0.92
CMTM3-202ENST00000424011 TEFQ10587 303 aa20.76■□□□□ 0.91
CMTM3-202ENST00000424011 RGS12O14924 1447 aa20.76■□□□□ 0.91
CMTM3-202ENST00000424011 PLEKHG2Q9H7P9 1386 aa20.76■□□□□ 0.91
CMTM3-202ENST00000424011 SEC24BO95487 1268 aa20.76■□□□□ 0.91
CMTM3-202ENST00000424011 CHRNA2Q15822 529 aa20.76■□□□□ 0.91
CMTM3-202ENST00000424011 LMO7Q8WWI1 1683 aa20.75■□□□□ 0.91
CMTM3-202ENST00000424011 GCC1Q96CN9 775 aa20.75■□□□□ 0.91
CMTM3-202ENST00000424011 RGPD2P0DJD1 1756 aa20.75■□□□□ 0.91
CMTM3-202ENST00000424011 COL18A1P39060 1754 aa20.75■□□□□ 0.91
CMTM3-202ENST00000424011 HOXB7P09629 217 aa20.74■□□□□ 0.91
CMTM3-202ENST00000424011 RAPGEF4Q8WZA2 1011 aa20.74■□□□□ 0.91
CMTM3-202ENST00000424011 TOM1O60784 492 aa20.73■□□□□ 0.91
CMTM3-202ENST00000424011 LGR6Q9HBX8 967 aa20.73■□□□□ 0.91
CMTM3-202ENST00000424011 AHDC1Q5TGY3 1603 aaPredicted RBP20.73■□□□□ 0.91
CMTM3-202ENST00000424011 CCT4P50991 539 aaKnown RBP20.72■□□□□ 0.91
CMTM3-202ENST00000424011 NLRP2Q9NX02 1062 aa20.72■□□□□ 0.91
CMTM3-202ENST00000424011 RNMTO43148 476 aaKnown RBP20.72■□□□□ 0.91
CMTM3-202ENST00000424011 NUCB1Q02818 461 aa20.72■□□□□ 0.91
CMTM3-202ENST00000424011 GSE1Q14687 1217 aa20.71■□□□□ 0.91
CMTM3-202ENST00000424011 PRDM11Q9NQV5 511 aa20.71■□□□□ 0.91
CMTM3-202ENST00000424011 RGPD5Q99666 1765 aa20.71■□□□□ 0.91
CMTM3-202ENST00000424011 BTBD11A6QL63 1104 aa20.71■□□□□ 0.91
CMTM3-202ENST00000424011 CSB-PGBD3P0DP91 1061 aa20.71■□□□□ 0.91
CMTM3-202ENST00000424011 SLC4A3P48751 1232 aa20.71■□□□□ 0.91
CMTM3-202ENST00000424011 MPRIPQ6WCQ1 1025 aa20.71■□□□□ 0.91
CMTM3-202ENST00000424011 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.71■□□□□ 0.91
CMTM3-202ENST00000424011 TATP17735 454 aaPredicted RBP20.7■□□□□ 0.9
CMTM3-202ENST00000424011 EIF4A1P60842 406 aaKnown RBP20.7■□□□□ 0.9
CMTM3-202ENST00000424011 C1orf115Q9H7X2 142 aa20.7■□□□□ 0.9
CMTM3-202ENST00000424011 SPG7Q9UQ90 795 aa20.7■□□□□ 0.9
CMTM3-202ENST00000424011 FLIIQ13045 1269 aa20.69■□□□□ 0.9
CMTM3-202ENST00000424011 HDGFL1Q5TGJ6 251 aa20.69■□□□□ 0.9
CMTM3-202ENST00000424011 RPAP2Q8IXW5 612 aaPredicted RBP20.69■□□□□ 0.9
CMTM3-202ENST00000424011 FAM208AQ9UK61 1670 aaKnown RBP20.68■□□□□ 0.9
CMTM3-202ENST00000424011 G2E3Q7L622 706 aa20.68■□□□□ 0.9
CMTM3-202ENST00000424011 CHD1LQ86WJ1 897 aa20.68■□□□□ 0.9
CMTM3-202ENST00000424011 FKBP5Q13451 457 aaPredicted RBP20.67■□□□□ 0.9
CMTM3-202ENST00000424011 ABCA3Q99758 1704 aa20.66■□□□□ 0.9
CMTM3-202ENST00000424011 PIP4K2BP78356 416 aa20.66■□□□□ 0.9
CMTM3-202ENST00000424011 SLC4A10Q6U841 1118 aa20.66■□□□□ 0.9
CMTM3-202ENST00000424011 SIRT2Q8IXJ6 389 aa20.66■□□□□ 0.9
CMTM3-202ENST00000424011 KDM3BQ7LBC6 1761 aa20.65■□□□□ 0.9
CMTM3-202ENST00000424011 ANKRD44Q8N8A2 993 aa20.65■□□□□ 0.9
CMTM3-202ENST00000424011 ANKRD45Q5TZF3 282 aa20.64■□□□□ 0.89
CMTM3-202ENST00000424011 NECTIN2Q92692 538 aa20.64■□□□□ 0.89
CMTM3-202ENST00000424011 UBAP1LF5GYI3 381 aa20.63■□□□□ 0.89
CMTM3-202ENST00000424011 DAXXQ9UER7 740 aaPredicted RBP20.63■□□□□ 0.89
CMTM3-202ENST00000424011 PXDNLA1KZ92 1463 aa20.63■□□□□ 0.89
CMTM3-202ENST00000424011 F6X3S4 739 aa20.62■□□□□ 0.89
CMTM3-202ENST00000424011 WDR17Q8IZU2 1322 aa20.62■□□□□ 0.89
CMTM3-202ENST00000424011 CACNA1FO60840 1977 aa20.62■□□□□ 0.89
CMTM3-202ENST00000424011 IFNL2Q8IZJ0 200 aa20.62■□□□□ 0.89
CMTM3-202ENST00000424011 MEIS3Q99687 375 aa20.62■□□□□ 0.89
CMTM3-202ENST00000424011 LNPKQ9C0E8 428 aa20.62■□□□□ 0.89
CMTM3-202ENST00000424011 UPF2Q9HAU5 1272 aaKnown RBP20.62■□□□□ 0.89
CMTM3-202ENST00000424011 ADAMTS7Q9UKP4 1686 aa20.62■□□□□ 0.89
CMTM3-202ENST00000424011 GNAI3P08754 354 aa20.61■□□□□ 0.89
CMTM3-202ENST00000424011 CEP85Q6P2H3 762 aa20.61■□□□□ 0.89
CMTM3-202ENST00000424011 DCTPP1Q9H773 170 aa20.61■□□□□ 0.89
CMTM3-202ENST00000424011 ATP10DQ9P241 1426 aa20.61■□□□□ 0.89
CMTM3-202ENST00000424011 COL5A2P05997 1499 aaPredicted RBP20.61■□□□□ 0.89
CMTM3-202ENST00000424011 HMMRO75330 724 aa20.61■□□□□ 0.89
CMTM3-202ENST00000424011 PHKG2P15735 406 aa20.61■□□□□ 0.89
CMTM3-202ENST00000424011 HSP90AB1P08238 724 aaKnown RBP20.6■□□□□ 0.89
CMTM3-202ENST00000424011 EIF2S2P20042 333 aaKnown RBP20.6■□□□□ 0.89
CMTM3-202ENST00000424011 FAM43AQ8N2R8 423 aa20.6■□□□□ 0.89
CMTM3-202ENST00000424011 COL22A1Q8NFW1 1626 aaPredicted RBP20.6■□□□□ 0.89
CMTM3-202ENST00000424011 MEGF6O75095 1541 aa20.6■□□□□ 0.89
CMTM3-202ENST00000424011 COL16A1Q07092 1604 aaPredicted RBP20.59■□□□□ 0.89
CMTM3-202ENST00000424011 KCNQ3O43525 872 aa20.59■□□□□ 0.89
CMTM3-202ENST00000424011 GNAI2P04899 355 aa20.59■□□□□ 0.89
CMTM3-202ENST00000424011 PHLPP1O60346 1717 aa20.59■□□□□ 0.89
CMTM3-202ENST00000424011 DBF4Q9UBU7 674 aaPredicted RBP20.59■□□□□ 0.89
CMTM3-202ENST00000424011 HEG1Q9ULI3 1381 aa20.58■□□□□ 0.89
CMTM3-202ENST00000424011 TOM1L2Q6ZVM7 507 aa20.58■□□□□ 0.89
CMTM3-202ENST00000424011 DCAF5Q96JK2 942 aa20.58■□□□□ 0.89
CMTM3-202ENST00000424011 TBC1D32Q96NH3 1257 aa20.58■□□□□ 0.89
CMTM3-202ENST00000424011 SLC52A2Q9HAB3 445 aa20.58■□□□□ 0.89
CMTM3-202ENST00000424011 GIGYF1O75420 1035 aaPredicted RBP20.58■□□□□ 0.88
CMTM3-202ENST00000424011 EVA1CP58658 441 aa20.57■□□□□ 0.88
CMTM3-202ENST00000424011 CHPF2Q9P2E5 772 aa20.57■□□□□ 0.88
CMTM3-202ENST00000424011 GLIPR1L2Q4G1C9 344 aa20.56■□□□□ 0.88
CMTM3-202ENST00000424011 CERKQ8TCT0 537 aa20.56■□□□□ 0.88
CMTM3-202ENST00000424011 CARD10Q9BWT7 1032 aa20.56■□□□□ 0.88
CMTM3-202ENST00000424011 STRN4Q9NRL3 753 aa20.56■□□□□ 0.88
CMTM3-202ENST00000424011 PHAXQ9H814 394 aaKnown RBP20.55■□□□□ 0.88
CMTM3-202ENST00000424011 KDM6AO15550 1401 aaPredicted RBP20.55■□□□□ 0.88
CMTM3-202ENST00000424011 BMP2KLQ5H9B9 411 aa20.55■□□□□ 0.88
CMTM3-202ENST00000424011 LARP1Q6PKG0 1096 aaKnown RBP20.55■□□□□ 0.88
CMTM3-202ENST00000424011 BTG4Q9NY30 223 aa20.55■□□□□ 0.88
CMTM3-202ENST00000424011 SIPA1L3O60292 1781 aaPredicted RBP20.55■□□□□ 0.88
CMTM3-202ENST00000424011 ZNF790Q6PG37 636 aa20.54■□□□□ 0.88
CMTM3-202ENST00000424011 NFKBIBQ15653 356 aa20.53■□□□□ 0.88
CMTM3-202ENST00000424011 PKD1L3Q7Z443 1732 aa20.53■□□□□ 0.88
CMTM3-202ENST00000424011 SRCIN1Q9C0H9 1055 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms