RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 WDR44Q5JSH3 913 aa9.98□□□□□ -0.81
SFXN1-202ENST00000421887 CYP2U1Q7Z449 544 aa9.98□□□□□ -0.81
SFXN1-202ENST00000421887 ARHGEF10LQ9HCE6 1279 aa9.98□□□□□ -0.81
SFXN1-202ENST00000421887 GDF2Q9UK05 429 aaPredicted RBP9.98□□□□□ -0.81
SFXN1-202ENST00000421887 PHF24Q9UPV7 400 aa9.98□□□□□ -0.81
SFXN1-202ENST00000421887 ESF1Q9H501 851 aaKnown RBP9.97□□□□□ -0.81
SFXN1-202ENST00000421887 SUV39H2Q9H5I1 410 aa9.97□□□□□ -0.81
SFXN1-202ENST00000421887 THBS1P07996 1170 aa9.96□□□□□ -0.82
SFXN1-202ENST00000421887 PHKA2P46019 1235 aa9.96□□□□□ -0.82
SFXN1-202ENST00000421887 RAB6BQ9NRW1 208 aa9.96□□□□□ -0.82
SFXN1-202ENST00000421887 ZBBXA8MT70 800 aa9.95□□□□□ -0.82
SFXN1-202ENST00000421887 SCTRP47872 440 aa9.95□□□□□ -0.82
SFXN1-202ENST00000421887 RNF20Q5VTR2 975 aa9.95□□□□□ -0.82
SFXN1-202ENST00000421887 C1QTNF9BB2RNN3 333 aa9.94□□□□□ -0.82
SFXN1-202ENST00000421887 GOLGA6L1Q8N7Z2 621 aa9.94□□□□□ -0.82
SFXN1-202ENST00000421887 CCDC125Q86Z20 511 aa9.93□□□□□ -0.82
SFXN1-202ENST00000421887 PCDHB11Q9Y5F2 797 aa9.93□□□□□ -0.82
SFXN1-202ENST00000421887 BMP4P12644 408 aa9.92□□□□□ -0.82
SFXN1-202ENST00000421887 LINC00114Q6XXX2 140 aa9.92□□□□□ -0.82
SFXN1-202ENST00000421887 TRIM34Q9BYJ4 488 aa9.92□□□□□ -0.82
SFXN1-202ENST00000421887 FAM117AQ9C073 453 aa9.92□□□□□ -0.82
SFXN1-202ENST00000421887 OSBPL3Q9H4L5 887 aa9.92□□□□□ -0.82
SFXN1-202ENST00000421887 FBXO45P0C2W1 286 aa9.91□□□□□ -0.82
SFXN1-202ENST00000421887 CSB-PGBD3P0DP91 1061 aa9.91□□□□□ -0.82
SFXN1-202ENST00000421887 RFC5P40937 340 aa9.91□□□□□ -0.82
SFXN1-202ENST00000421887 CD163Q86VB7 1156 aa9.91□□□□□ -0.82
SFXN1-202ENST00000421887 PGBD3Q8N328 593 aa9.91□□□□□ -0.82
SFXN1-202ENST00000421887 DDRGK1Q96HY6 314 aa9.91□□□□□ -0.82
SFXN1-202ENST00000421887 RUBCNLQ9H714 662 aa9.91□□□□□ -0.82
SFXN1-202ENST00000421887 GGA1Q9UJY5 639 aa9.91□□□□□ -0.82
SFXN1-202ENST00000421887 A0A1B0GTH6 734 aa9.9□□□□□ -0.82
SFXN1-202ENST00000421887 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.9□□□□□ -0.82
SFXN1-202ENST00000421887 PIK3R2O00459 728 aa9.9□□□□□ -0.82
SFXN1-202ENST00000421887 GNB5O14775 395 aa9.9□□□□□ -0.82
SFXN1-202ENST00000421887 CNKSR1Q969H4 720 aa9.9□□□□□ -0.82
SFXN1-202ENST00000421887 GPBP1L1Q9HC44 474 aaPredicted RBP9.9□□□□□ -0.82
SFXN1-202ENST00000421887 CENPCQ03188 943 aa9.89□□□□□ -0.83
SFXN1-202ENST00000421887 ZSCAN10Q96SZ4 725 aaPredicted RBP9.89□□□□□ -0.83
SFXN1-202ENST00000421887 KRTAP9-2Q9BYQ4 174 aa9.89□□□□□ -0.83
SFXN1-202ENST00000421887 C2CD2LO14523 706 aa9.88□□□□□ -0.83
SFXN1-202ENST00000421887 TRAK2O60296 914 aa9.88□□□□□ -0.83
SFXN1-202ENST00000421887 HOXB4P17483 251 aaPredicted RBP9.88□□□□□ -0.83
SFXN1-202ENST00000421887 GTF2E1P29083 439 aaPredicted RBP9.88□□□□□ -0.83
SFXN1-202ENST00000421887 CHRNA4P43681 627 aa9.88□□□□□ -0.83
SFXN1-202ENST00000421887 ABHD17AQ96GS6 310 aa9.88□□□□□ -0.83
SFXN1-202ENST00000421887 ESYT1Q9BSJ8 1104 aa9.88□□□□□ -0.83
SFXN1-202ENST00000421887 KDM4CQ9H3R0 1056 aa9.88□□□□□ -0.83
SFXN1-202ENST00000421887 SEMA6BQ9H3T3 888 aa9.88□□□□□ -0.83
SFXN1-202ENST00000421887 NCAPD3P42695 1498 aa9.87□□□□□ -0.83
SFXN1-202ENST00000421887 DOC2BQ14184 412 aa9.87□□□□□ -0.83
SFXN1-202ENST00000421887 EFHC2Q5JST6 749 aa9.87□□□□□ -0.83
SFXN1-202ENST00000421887 TMEM214Q6NUQ4 689 aaKnown RBP9.87□□□□□ -0.83
SFXN1-202ENST00000421887 BTBD6Q96KE9 485 aa9.87□□□□□ -0.83
SFXN1-202ENST00000421887 ATXN7L1Q9ULK2 861 aaPredicted RBP9.87□□□□□ -0.83
SFXN1-202ENST00000421887 GNRH1P01148 92 aa9.86□□□□□ -0.83
SFXN1-202ENST00000421887 IL2RAP01589 272 aa9.86□□□□□ -0.83
SFXN1-202ENST00000421887 FGFR3P22607 806 aa9.86□□□□□ -0.83
SFXN1-202ENST00000421887 CTBSQ01459 385 aa9.86□□□□□ -0.83
SFXN1-202ENST00000421887 UBAP2LQ14157 1087 aaKnown RBP9.86□□□□□ -0.83
SFXN1-202ENST00000421887 GNASQ5JWF2 1037 aa9.86□□□□□ -0.83
SFXN1-202ENST00000421887 SLCO4C1Q6ZQN7 724 aa9.86□□□□□ -0.83
SFXN1-202ENST00000421887 NESP48681 1621 aa9.85□□□□□ -0.83
SFXN1-202ENST00000421887 THOC2Q8NI27 1593 aaKnown RBP9.85□□□□□ -0.83
SFXN1-202ENST00000421887 KRTAP9-6A0A140TA67 174 aa9.85□□□□□ -0.83
SFXN1-202ENST00000421887 LBRQ14739 615 aaKnown RBP9.85□□□□□ -0.83
SFXN1-202ENST00000421887 NOP53Q9NZM5 478 aaKnown RBP9.85□□□□□ -0.83
SFXN1-202ENST00000421887 MSX1P28360 303 aa9.84□□□□□ -0.83
SFXN1-202ENST00000421887 ZMYM1Q5SVZ6 1142 aa9.84□□□□□ -0.83
SFXN1-202ENST00000421887 BNIP3LO60238 219 aa9.83□□□□□ -0.84
SFXN1-202ENST00000421887 EPXP11678 715 aa9.83□□□□□ -0.84
SFXN1-202ENST00000421887 ITGB7P26010 798 aa9.83□□□□□ -0.84
SFXN1-202ENST00000421887 C4orf17Q53FE4 359 aa9.83□□□□□ -0.84
SFXN1-202ENST00000421887 NEURL1BA8MQ27 555 aa9.82□□□□□ -0.84
SFXN1-202ENST00000421887 MCCD1P59942 119 aaPredicted RBP9.82□□□□□ -0.84
SFXN1-202ENST00000421887 RNF135Q8IUD6 432 aa9.82□□□□□ -0.84
SFXN1-202ENST00000421887 DGKGP49619 791 aa9.81□□□□□ -0.84
SFXN1-202ENST00000421887 SMARCA2P51531 1590 aa9.8□□□□□ -0.84
SFXN1-202ENST00000421887 MYCP01106 439 aaPredicted RBP9.8□□□□□ -0.84
SFXN1-202ENST00000421887 NR1H3Q13133 447 aa9.8□□□□□ -0.84
SFXN1-202ENST00000421887 ZNF330Q9Y3S2 320 aaPredicted RBP9.8□□□□□ -0.84
SFXN1-202ENST00000421887 TMEM259Q4ZIN3 620 aa9.79□□□□□ -0.84
SFXN1-202ENST00000421887 ZNF592Q92610 1267 aa9.79□□□□□ -0.84
SFXN1-202ENST00000421887 XAGE2Q96GT9 111 aa9.79□□□□□ -0.84
SFXN1-202ENST00000421887 GJD4Q96KN9 370 aaPredicted RBP9.79□□□□□ -0.84
SFXN1-202ENST00000421887 FHDC1Q9C0D6 1143 aaPredicted RBP9.79□□□□□ -0.84
SFXN1-202ENST00000421887 NDFIP2Q9NV92 336 aa9.79□□□□□ -0.84
SFXN1-202ENST00000421887 ATAD2BQ9ULI0 1458 aa9.79□□□□□ -0.84
SFXN1-202ENST00000421887 HMGXB3Q12766 1538 aa9.78□□□□□ -0.84
SFXN1-202ENST00000421887 SCO2A0A1W2PP80 73 aa9.78□□□□□ -0.84
SFXN1-202ENST00000421887 ARAFP10398 606 aa9.78□□□□□ -0.84
SFXN1-202ENST00000421887 GATA4P43694 442 aa9.78□□□□□ -0.84
SFXN1-202ENST00000421887 CHSY3Q70JA7 882 aa9.78□□□□□ -0.84
SFXN1-202ENST00000421887 HRH3Q9Y5N1 445 aa9.78□□□□□ -0.84
SFXN1-202ENST00000421887 KIF21AQ7Z4S6 1674 aa9.77□□□□□ -0.84
SFXN1-202ENST00000421887 LAMC3Q9Y6N6 1575 aa9.77□□□□□ -0.85
SFXN1-202ENST00000421887 CDCA7Q9BWT1 371 aaPredicted RBP9.77□□□□□ -0.85
SFXN1-202ENST00000421887 ESCO1Q5FWF5 840 aa9.75□□□□□ -0.85
SFXN1-202ENST00000421887 FIGNL1Q6PIW4 674 aa9.75□□□□□ -0.85
SFXN1-202ENST00000421887 RHBDD1Q8TEB9 315 aa9.75□□□□□ -0.85
SFXN1-202ENST00000421887 CRISPLD1Q9H336 500 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms