RNA–Protein interactions for RNA: ENST00000417512.1

SDCCAG3-205, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 2

Gene SDCCAG3, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-205ENST00000417512 A0A0G2JLW4 131 aa17.34■□□□□ 0.37
SDCCAG3-205ENST00000417512 C5P01031 1676 aa17.34■□□□□ 0.37
SDCCAG3-205ENST00000417512 NLGN1Q8N2Q7 840 aa17.34■□□□□ 0.37
SDCCAG3-205ENST00000417512 EMILIN1Q9Y6C2 1016 aa17.34■□□□□ 0.37
SDCCAG3-205ENST00000417512 ITPK1Q13572 414 aa17.33■□□□□ 0.36
SDCCAG3-205ENST00000417512 CDCA8Q53HL2 280 aa17.33■□□□□ 0.36
SDCCAG3-205ENST00000417512 IFNL2Q8IZJ0 200 aa17.33■□□□□ 0.36
SDCCAG3-205ENST00000417512 RTCBQ9Y3I0 505 aaKnown RBP17.33■□□□□ 0.36
SDCCAG3-205ENST00000417512 RGPD2P0DJD1 1756 aa17.33■□□□□ 0.36
SDCCAG3-205ENST00000417512 WASHC2AQ641Q2 1341 aa17.32■□□□□ 0.36
SDCCAG3-205ENST00000417512 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.32■□□□□ 0.36
SDCCAG3-205ENST00000417512 C4BP0C0L5 1744 aa17.32■□□□□ 0.36
SDCCAG3-205ENST00000417512 C16orf71Q8IYS4 520 aaPredicted RBP17.31■□□□□ 0.36
SDCCAG3-205ENST00000417512 DNAJC5GQ8N7S2 189 aa17.31■□□□□ 0.36
SDCCAG3-205ENST00000417512 FCHSD2O94868 740 aa17.3■□□□□ 0.36
SDCCAG3-205ENST00000417512 EYA1Q99502 592 aa17.3■□□□□ 0.36
SDCCAG3-205ENST00000417512 ATG3Q9NT62 314 aa17.3■□□□□ 0.36
SDCCAG3-205ENST00000417512 CCDC87Q9NVE4 849 aa17.3■□□□□ 0.36
SDCCAG3-205ENST00000417512 PHKG2P15735 406 aa17.29■□□□□ 0.36
SDCCAG3-205ENST00000417512 RBM42Q9BTD8 480 aaKnown RBP17.29■□□□□ 0.36
SDCCAG3-205ENST00000417512 NMRK2Q9NPI5 230 aa17.29■□□□□ 0.36
SDCCAG3-205ENST00000417512 PARP3Q9Y6F1 533 aa17.29■□□□□ 0.36
SDCCAG3-205ENST00000417512 DPEP1P16444 411 aa17.28■□□□□ 0.36
SDCCAG3-205ENST00000417512 RFC4P35249 363 aa17.28■□□□□ 0.36
SDCCAG3-205ENST00000417512 ARHGEF1Q92888 912 aaKnown RBP17.28■□□□□ 0.36
SDCCAG3-205ENST00000417512 CARD14Q9BXL6 1004 aa17.28■□□□□ 0.36
SDCCAG3-205ENST00000417512 KIF7Q2M1P5 1343 aa17.26■□□□□ 0.35
SDCCAG3-205ENST00000417512 ADRA2BP18089 450 aa17.26■□□□□ 0.35
SDCCAG3-205ENST00000417512 RC3H1Q5TC82 1133 aaKnown RBP17.26■□□□□ 0.35
SDCCAG3-205ENST00000417512 C9orf131Q5VYM1 1079 aa17.25■□□□□ 0.35
SDCCAG3-205ENST00000417512 RBM46Q8TBY0 533 aaKnown RBP17.25■□□□□ 0.35
SDCCAG3-205ENST00000417512 PIM2Q9P1W9 311 aa17.25■□□□□ 0.35
SDCCAG3-205ENST00000417512 PXDNLA1KZ92 1463 aa17.24■□□□□ 0.35
SDCCAG3-205ENST00000417512 ERVV-2B6SEH9 535 aa17.24■□□□□ 0.35
SDCCAG3-205ENST00000417512 RPS6KA4O75676 772 aa17.24■□□□□ 0.35
SDCCAG3-205ENST00000417512 GYS1P13807 737 aa17.24■□□□□ 0.35
SDCCAG3-205ENST00000417512 TAF1LQ8IZX4 1826 aa17.24■□□□□ 0.35
SDCCAG3-205ENST00000417512 KDM2BQ8NHM5 1336 aa17.22■□□□□ 0.35
SDCCAG3-205ENST00000417512 HSP90AB1P08238 724 aaKnown RBP17.22■□□□□ 0.35
SDCCAG3-205ENST00000417512 FSTL1Q12841 308 aa17.22■□□□□ 0.35
SDCCAG3-205ENST00000417512 POLKQ9UBT6 870 aa17.22■□□□□ 0.35
SDCCAG3-205ENST00000417512 KCNA3P22001 575 aa17.21■□□□□ 0.35
SDCCAG3-205ENST00000417512 CABP4P57796 275 aa17.21■□□□□ 0.35
SDCCAG3-205ENST00000417512 DALRD3Q5D0E6 543 aaKnown RBP17.21■□□□□ 0.35
SDCCAG3-205ENST00000417512 KLRG1Q96E93 195 aa17.21■□□□□ 0.35
SDCCAG3-205ENST00000417512 DCAF5Q96JK2 942 aa17.21■□□□□ 0.35
SDCCAG3-205ENST00000417512 SLC4A9Q96Q91 983 aa17.21■□□□□ 0.35
SDCCAG3-205ENST00000417512 UBR3Q6ZT12 1888 aa17.2■□□□□ 0.34
SDCCAG3-205ENST00000417512 TNNT2P45379 298 aaPredicted RBP17.2■□□□□ 0.34
SDCCAG3-205ENST00000417512 HTRA3P83110 453 aa17.2■□□□□ 0.34
SDCCAG3-205ENST00000417512 PLEKHO1Q53GL0 409 aaPredicted RBP17.2■□□□□ 0.34
SDCCAG3-205ENST00000417512 RRAGCQ9HB90 399 aa17.2■□□□□ 0.34
SDCCAG3-205ENST00000417512 TOGARAM1Q9Y4F4 1720 aa17.2■□□□□ 0.34
SDCCAG3-205ENST00000417512 NCAPD2Q15021 1401 aa17.2■□□□□ 0.34
SDCCAG3-205ENST00000417512 EIF4A2Q14240 407 aaKnown RBP17.19■□□□□ 0.34
SDCCAG3-205ENST00000417512 YTHDC1Q96MU7 727 aaKnown RBP17.19■□□□□ 0.34
SDCCAG3-205ENST00000417512 RNF181Q9P0P0 153 aa17.19■□□□□ 0.34
SDCCAG3-205ENST00000417512 C10orf71Q711Q0 1435 aa17.19■□□□□ 0.34
SDCCAG3-205ENST00000417512 CNTNAP4Q9C0A0 1308 aa17.19■□□□□ 0.34
SDCCAG3-205ENST00000417512 PTCD1O75127 700 aaKnown RBP17.18■□□□□ 0.34
SDCCAG3-205ENST00000417512 COL13A1Q5TAT6 717 aaPredicted RBP17.18■□□□□ 0.34
SDCCAG3-205ENST00000417512 ITGB4P16144 1822 aa17.18■□□□□ 0.34
SDCCAG3-205ENST00000417512 CICQ96RK0 1608 aaPredicted RBP17.18■□□□□ 0.34
SDCCAG3-205ENST00000417512 PLEKHG2Q9H7P9 1386 aa17.17■□□□□ 0.34
SDCCAG3-205ENST00000417512 JMYQ8N9B5 988 aa17.17■□□□□ 0.34
SDCCAG3-205ENST00000417512 CAPN15O75808 1086 aa17.16■□□□□ 0.34
SDCCAG3-205ENST00000417512 MTHFSP49914 203 aa17.16■□□□□ 0.34
SDCCAG3-205ENST00000417512 AMOTQ4VCS5 1084 aa17.16■□□□□ 0.34
SDCCAG3-205ENST00000417512 PKD1L3Q7Z443 1732 aa17.16■□□□□ 0.34
SDCCAG3-205ENST00000417512 KDRP35968 1356 aa17.15■□□□□ 0.34
SDCCAG3-205ENST00000417512 MAP2P11137 1827 aaKnown RBP17.15■□□□□ 0.34
SDCCAG3-205ENST00000417512 CRKLP46109 303 aaKnown RBP17.15■□□□□ 0.34
SDCCAG3-205ENST00000417512 FKBP8Q14318 412 aa17.15■□□□□ 0.34
SDCCAG3-205ENST00000417512 ZNF530Q6P9A1 599 aaPredicted RBP17.15■□□□□ 0.34
SDCCAG3-205ENST00000417512 POLR3GLQ9BT43 218 aa17.15■□□□□ 0.34
SDCCAG3-205ENST00000417512 SRP68Q9UHB9 627 aaKnown RBP17.15■□□□□ 0.34
SDCCAG3-205ENST00000417512 CHRNA5P30532 468 aa17.14■□□□□ 0.33
SDCCAG3-205ENST00000417512 C1orf141Q5JVX7 400 aa17.14■□□□□ 0.33
SDCCAG3-205ENST00000417512 NFATC2IPQ8NCF5 419 aa17.14■□□□□ 0.33
SDCCAG3-205ENST00000417512 SMC1BQ8NDV3 1235 aa17.14■□□□□ 0.33
SDCCAG3-205ENST00000417512 TNS4Q8IZW8 715 aa17.13■□□□□ 0.33
SDCCAG3-205ENST00000417512 ZPR1O75312 459 aa17.12■□□□□ 0.33
SDCCAG3-205ENST00000417512 N4BP2Q86UW6 1770 aaPredicted RBP17.11■□□□□ 0.33
SDCCAG3-205ENST00000417512 DDR1Q08345 913 aa17.11■□□□□ 0.33
SDCCAG3-205ENST00000417512 USP42Q9H9J4 1324 aaKnown RBP17.11■□□□□ 0.33
SDCCAG3-205ENST00000417512 KCPQ6ZWJ8 1503 aa17.11■□□□□ 0.33
SDCCAG3-205ENST00000417512 KIF20BQ96Q89 1820 aa17.1■□□□□ 0.33
SDCCAG3-205ENST00000417512 TM4SF1P30408 202 aa17.1■□□□□ 0.33
SDCCAG3-205ENST00000417512 PRKRIP1Q9H875 184 aaPredicted RBP17.1■□□□□ 0.33
SDCCAG3-205ENST00000417512 POLRMTO00411 1230 aaKnown RBP17.09■□□□□ 0.33
SDCCAG3-205ENST00000417512 VEGFAP15692 232 aaPredicted RBP17.09■□□□□ 0.33
SDCCAG3-205ENST00000417512 C4AP0C0L4 1744 aa17.09■□□□□ 0.33
SDCCAG3-205ENST00000417512 USPL1Q5W0Q7 1092 aa17.08■□□□□ 0.32
SDCCAG3-205ENST00000417512 INTS5Q6P9B9 1019 aaKnown RBP17.08■□□□□ 0.32
SDCCAG3-205ENST00000417512 KIF13BQ9NQT8 1826 aa17.07■□□□□ 0.32
SDCCAG3-205ENST00000417512 LMNB1P20700 586 aa17.07■□□□□ 0.32
SDCCAG3-205ENST00000417512 GLTPD2A6NH11 291 aa17.06■□□□□ 0.32
SDCCAG3-205ENST00000417512 PRELPP51888 382 aa17.06■□□□□ 0.32
SDCCAG3-205ENST00000417512 RALBP1Q15311 655 aa17.06■□□□□ 0.32
SDCCAG3-205ENST00000417512 KIAA1551Q9HCM1 1747 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms