RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 PLEKHG2Q9H7P9 1386 aa21.75■■□□□ 1.07
CALD1-204ENST00000417172 ATF7IPQ6VMQ6 1270 aa21.75■■□□□ 1.07
CALD1-204ENST00000417172 JCADQ9P266 1359 aa21.75■■□□□ 1.07
CALD1-204ENST00000417172 BABAM1Q9NWV8 329 aa21.74■■□□□ 1.07
CALD1-204ENST00000417172 DZIP1LQ8IYY4 767 aaKnown RBP21.74■■□□□ 1.07
CALD1-204ENST00000417172 NECTIN2Q92692 538 aa21.74■■□□□ 1.07
CALD1-204ENST00000417172 NWD2Q9ULI1 1742 aa21.74■■□□□ 1.07
CALD1-204ENST00000417172 BRPF1P55201 1214 aaPredicted RBP21.73■■□□□ 1.07
CALD1-204ENST00000417172 FTSJ3Q8IY81 847 aaKnown RBP21.73■■□□□ 1.07
CALD1-204ENST00000417172 PCDH11XQ9BZA7 1347 aa21.73■■□□□ 1.07
CALD1-204ENST00000417172 PCDH11YQ9BZA8 1340 aa21.73■■□□□ 1.07
CALD1-204ENST00000417172 DDX54Q8TDD1 881 aaKnown RBP21.72■■□□□ 1.07
CALD1-204ENST00000417172 DISP2A7MBM2 1401 aa21.72■■□□□ 1.07
CALD1-204ENST00000417172 EIF4A1P60842 406 aaKnown RBP21.72■■□□□ 1.07
CALD1-204ENST00000417172 NFATC2IPQ8NCF5 419 aa21.72■■□□□ 1.07
CALD1-204ENST00000417172 LRP6O75581 1613 aa21.72■■□□□ 1.07
CALD1-204ENST00000417172 MRC1P22897 1456 aa21.72■■□□□ 1.07
CALD1-204ENST00000417172 HSPA1LP34931 641 aa21.71■■□□□ 1.07
CALD1-204ENST00000417172 DCAF5Q96JK2 942 aa21.71■■□□□ 1.07
CALD1-204ENST00000417172 SLC52A2Q9HAB3 445 aa21.71■■□□□ 1.07
CALD1-204ENST00000417172 SLIT2O94813 1529 aa21.71■■□□□ 1.07
CALD1-204ENST00000417172 TOGARAM1Q9Y4F4 1720 aa21.71■■□□□ 1.07
CALD1-204ENST00000417172 SLC39A6Q13433 755 aa21.7■■□□□ 1.07
CALD1-204ENST00000417172 TMEM57Q8N5G2 664 aa21.7■■□□□ 1.06
CALD1-204ENST00000417172 IPO8O15397 1037 aaKnown RBP21.69■■□□□ 1.06
CALD1-204ENST00000417172 MVPQ14764 893 aaKnown RBP21.69■■□□□ 1.06
CALD1-204ENST00000417172 C8orf37Q96NL8 207 aa21.69■■□□□ 1.06
CALD1-204ENST00000417172 C5P01031 1676 aa21.68■■□□□ 1.06
CALD1-204ENST00000417172 SLC4A2P04920 1241 aa21.68■■□□□ 1.06
CALD1-204ENST00000417172 G2E3Q7L622 706 aa21.68■■□□□ 1.06
CALD1-204ENST00000417172 PRAMEF22A3QJZ6 481 aa21.67■■□□□ 1.06
CALD1-204ENST00000417172 ITPRIPQ8IWB1 547 aa21.67■■□□□ 1.06
CALD1-204ENST00000417172 RGS12O14924 1447 aa21.67■■□□□ 1.06
CALD1-204ENST00000417172 HSP90AB1P08238 724 aaKnown RBP21.67■■□□□ 1.06
CALD1-204ENST00000417172 SPATA31A1Q5TZJ5 1347 aa21.66■■□□□ 1.06
CALD1-204ENST00000417172 CACNA1FO60840 1977 aa21.66■■□□□ 1.06
CALD1-204ENST00000417172 EIF2S2P20042 333 aaKnown RBP21.65■■□□□ 1.06
CALD1-204ENST00000417172 CABP4P57796 275 aa21.65■■□□□ 1.06
CALD1-204ENST00000417172 HDGFL1Q5TGJ6 251 aa21.65■■□□□ 1.06
CALD1-204ENST00000417172 ZNF790Q6PG37 636 aa21.65■■□□□ 1.06
CALD1-204ENST00000417172 ARHGAP45Q92619 1136 aa21.65■■□□□ 1.06
CALD1-204ENST00000417172 MS4A1P11836 297 aa21.64■■□□□ 1.05
CALD1-204ENST00000417172 NGLY1Q96IV0 654 aa21.64■■□□□ 1.05
CALD1-204ENST00000417172 CCDC9Q9Y3X0 531 aaKnown RBP21.64■■□□□ 1.05
CALD1-204ENST00000417172 KAT6BQ8WYB5 2073 aa21.64■■□□□ 1.05
CALD1-204ENST00000417172 CCDC30Q5VVM6 783 aa21.63■■□□□ 1.05
CALD1-204ENST00000417172 ABCC4O15439 1325 aa21.63■■□□□ 1.05
CALD1-204ENST00000417172 HEG1Q9ULI3 1381 aa21.63■■□□□ 1.05
CALD1-204ENST00000417172 BCL9LQ86UU0 1499 aa21.63■■□□□ 1.05
CALD1-204ENST00000417172 NKX1-1Q15270 411 aaPredicted RBP21.63■■□□□ 1.05
CALD1-204ENST00000417172 SPATA31A5Q5VU36 1347 aa21.63■■□□□ 1.05
CALD1-204ENST00000417172 SPATA31A7Q8IWB4 1347 aa21.63■■□□□ 1.05
CALD1-204ENST00000417172 ITGB4P16144 1822 aa21.62■■□□□ 1.05
CALD1-204ENST00000417172 SPATA31A6Q5VVP1 1343 aa21.62■■□□□ 1.05
CALD1-204ENST00000417172 STK31Q9BXU1 1019 aa21.62■■□□□ 1.05
CALD1-204ENST00000417172 GLI3P10071 1580 aa21.61■■□□□ 1.05
CALD1-204ENST00000417172 GIGYF1O75420 1035 aaPredicted RBP21.61■■□□□ 1.05
CALD1-204ENST00000417172 SOS1Q07889 1333 aaPredicted RBP21.61■■□□□ 1.05
CALD1-204ENST00000417172 UNC5CLQ8IV45 518 aa21.61■■□□□ 1.05
CALD1-204ENST00000417172 PAPPAQ13219 1627 aa21.6■■□□□ 1.05
CALD1-204ENST00000417172 TNS2Q63HR2 1409 aa21.6■■□□□ 1.05
CALD1-204ENST00000417172 ANXA1P04083 346 aa21.6■■□□□ 1.05
CALD1-204ENST00000417172 ZNF496Q96IT1 587 aaPredicted RBP21.6■■□□□ 1.05
CALD1-204ENST00000417172 API5Q9BZZ5 524 aaKnown RBP21.6■■□□□ 1.05
CALD1-204ENST00000417172 CHPF2Q9P2E5 772 aa21.6■■□□□ 1.05
CALD1-204ENST00000417172 DDX19BQ9UMR2 479 aa21.59■■□□□ 1.05
CALD1-204ENST00000417172 PCDHB15Q9Y5E8 787 aa21.59■■□□□ 1.05
CALD1-204ENST00000417172 UBR2Q8IWV8 1755 aa21.59■■□□□ 1.05
CALD1-204ENST00000417172 F6X3S4 739 aa21.59■■□□□ 1.05
CALD1-204ENST00000417172 PHAXQ9H814 394 aaKnown RBP21.59■■□□□ 1.05
CALD1-204ENST00000417172 PTPRCP08575 1304 aa21.58■■□□□ 1.05
CALD1-204ENST00000417172 KDM2BQ8NHM5 1336 aa21.58■■□□□ 1.05
CALD1-204ENST00000417172 EXOC5O00471 708 aa21.58■■□□□ 1.04
CALD1-204ENST00000417172 HOXB7P09629 217 aa21.58■■□□□ 1.04
CALD1-204ENST00000417172 FLIIQ13045 1269 aa21.58■■□□□ 1.04
CALD1-204ENST00000417172 ERVV-2B6SEH9 535 aa21.57■■□□□ 1.04
CALD1-204ENST00000417172 IGHDP01880 384 aa21.57■■□□□ 1.04
CALD1-204ENST00000417172 SKAP1Q86WV1 359 aa21.57■■□□□ 1.04
CALD1-204ENST00000417172 DOT1LQ8TEK3 1739 aa21.57■■□□□ 1.04
CALD1-204ENST00000417172 TTC5Q8N0Z6 440 aa21.57■■□□□ 1.04
CALD1-204ENST00000417172 THRAP3Q9Y2W1 955 aaKnown RBP21.57■■□□□ 1.04
CALD1-204ENST00000417172 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.56■■□□□ 1.04
CALD1-204ENST00000417172 PROSER3Q2NL68 480 aa21.55■■□□□ 1.04
CALD1-204ENST00000417172 FNBP4Q8N3X1 1017 aaPredicted RBP21.55■■□□□ 1.04
CALD1-204ENST00000417172 FKBP5Q13451 457 aaPredicted RBP21.55■■□□□ 1.04
CALD1-204ENST00000417172 MEX3CQ5U5Q3 659 aaKnown RBP21.55■■□□□ 1.04
CALD1-204ENST00000417172 ZBTB40Q9NUA8 1239 aa21.55■■□□□ 1.04
CALD1-204ENST00000417172 KCPQ6ZWJ8 1503 aa21.54■■□□□ 1.04
CALD1-204ENST00000417172 FAM98CQ17RN3 349 aaKnown RBP21.54■■□□□ 1.04
CALD1-204ENST00000417172 USP21Q9UK80 565 aa21.54■■□□□ 1.04
CALD1-204ENST00000417172 LAMB4A4D0S4 1761 aa21.54■■□□□ 1.04
CALD1-204ENST00000417172 ZBTB7BO15156 539 aaPredicted RBP21.53■■□□□ 1.04
CALD1-204ENST00000417172 VPS72Q15906 364 aa21.53■■□□□ 1.04
CALD1-204ENST00000417172 DDB1Q16531 1140 aa21.53■■□□□ 1.04
CALD1-204ENST00000417172 SLC4A10Q6U841 1118 aa21.53■■□□□ 1.04
CALD1-204ENST00000417172 C1orf115Q9H7X2 142 aa21.53■■□□□ 1.04
CALD1-204ENST00000417172 INTS3Q68E01 1043 aaKnown RBP21.52■■□□□ 1.04
CALD1-204ENST00000417172 BARGINQ6ZT62 677 aa21.52■■□□□ 1.04
CALD1-204ENST00000417172 FMNL2Q96PY5 1086 aa21.52■■□□□ 1.04
CALD1-204ENST00000417172 TMOD3Q9NYL9 352 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms