RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 C1orf229Q6ZS94 237 aaPredicted RBP6.41□□□□□ -1.38
HMGB3P2-201ENST00000411913 PGBD3Q8N328 593 aa6.41□□□□□ -1.38
HMGB3P2-201ENST00000411913 GOLGA6L1Q8N7Z2 621 aa6.41□□□□□ -1.38
HMGB3P2-201ENST00000411913 TRIM34Q9BYJ4 488 aa6.41□□□□□ -1.38
HMGB3P2-201ENST00000411913 BMP4P12644 408 aa6.4□□□□□ -1.38
HMGB3P2-201ENST00000411913 GPBP1L1Q9HC44 474 aaPredicted RBP6.4□□□□□ -1.38
HMGB3P2-201ENST00000411913 RAB6BQ9NRW1 208 aa6.4□□□□□ -1.38
HMGB3P2-201ENST00000411913 A0A1B0GTH6 734 aa6.39□□□□□ -1.39
HMGB3P2-201ENST00000411913 MCCD1P59942 119 aaPredicted RBP6.39□□□□□ -1.39
HMGB3P2-201ENST00000411913 CENPCQ03188 943 aa6.39□□□□□ -1.39
HMGB3P2-201ENST00000411913 GNASQ5JWF2 1037 aa6.39□□□□□ -1.39
HMGB3P2-201ENST00000411913 ZNF592Q92610 1267 aa6.39□□□□□ -1.39
HMGB3P2-201ENST00000411913 CNKSR1Q969H4 720 aa6.39□□□□□ -1.39
HMGB3P2-201ENST00000411913 ZSCAN10Q96SZ4 725 aaPredicted RBP6.39□□□□□ -1.39
HMGB3P2-201ENST00000411913 KRTAP4-8Q9BYQ9 185 aa6.39□□□□□ -1.39
HMGB3P2-201ENST00000411913 OSBPL3Q9H4L5 887 aa6.39□□□□□ -1.39
HMGB3P2-201ENST00000411913 C1QTNF9BB2RNN3 333 aa6.38□□□□□ -1.39
HMGB3P2-201ENST00000411913 TRAK2O60296 914 aa6.38□□□□□ -1.39
HMGB3P2-201ENST00000411913 THBS1P07996 1170 aa6.38□□□□□ -1.39
HMGB3P2-201ENST00000411913 TMEM259Q4ZIN3 620 aa6.38□□□□□ -1.39
HMGB3P2-201ENST00000411913 EFHC2Q5JST6 749 aa6.38□□□□□ -1.39
HMGB3P2-201ENST00000411913 TMEM214Q6NUQ4 689 aaKnown RBP6.38□□□□□ -1.39
HMGB3P2-201ENST00000411913 ESYT1Q9BSJ8 1104 aa6.38□□□□□ -1.39
HMGB3P2-201ENST00000411913 SUV39H2Q9H5I1 410 aa6.38□□□□□ -1.39
HMGB3P2-201ENST00000411913 ZNF330Q9Y3S2 320 aaPredicted RBP6.38□□□□□ -1.39
HMGB3P2-201ENST00000411913 GNB5O14775 395 aa6.37□□□□□ -1.39
HMGB3P2-201ENST00000411913 GNRH1P01148 92 aa6.37□□□□□ -1.39
HMGB3P2-201ENST00000411913 LBRQ14739 615 aaKnown RBP6.37□□□□□ -1.39
HMGB3P2-201ENST00000411913 LINC00114Q6XXX2 140 aa6.37□□□□□ -1.39
HMGB3P2-201ENST00000411913 PSMG3-AS1Q96PY0 264 aa6.37□□□□□ -1.39
HMGB3P2-201ENST00000411913 RUBCNLQ9H714 662 aa6.37□□□□□ -1.39
HMGB3P2-201ENST00000411913 GGA1Q9UJY5 639 aa6.37□□□□□ -1.39
HMGB3P2-201ENST00000411913 ATXN7L1Q9ULK2 861 aaPredicted RBP6.37□□□□□ -1.39
HMGB3P2-201ENST00000411913 MYCP01106 439 aaPredicted RBP6.36□□□□□ -1.39
HMGB3P2-201ENST00000411913 SLCO4C1Q6ZQN7 724 aa6.36□□□□□ -1.39
HMGB3P2-201ENST00000411913 BTBD6Q96KE9 485 aa6.36□□□□□ -1.39
HMGB3P2-201ENST00000411913 IL2RAP01589 272 aa6.35□□□□□ -1.39
HMGB3P2-201ENST00000411913 FGFR3P22607 806 aa6.35□□□□□ -1.39
HMGB3P2-201ENST00000411913 MSX1P28360 303 aa6.35□□□□□ -1.39
HMGB3P2-201ENST00000411913 NR1H3Q13133 447 aa6.35□□□□□ -1.39
HMGB3P2-201ENST00000411913 CD163Q86VB7 1156 aa6.35□□□□□ -1.39
HMGB3P2-201ENST00000411913 ABHD17AQ96GS6 310 aa6.35□□□□□ -1.39
HMGB3P2-201ENST00000411913 PCMTD1Q96MG8 357 aaPredicted RBP6.35□□□□□ -1.39
HMGB3P2-201ENST00000411913 NOP53Q9NZM5 478 aaKnown RBP6.35□□□□□ -1.39
HMGB3P2-201ENST00000411913 C2CD2LO14523 706 aa6.34□□□□□ -1.39
HMGB3P2-201ENST00000411913 CTBSQ01459 385 aa6.34□□□□□ -1.39
HMGB3P2-201ENST00000411913 C4orf17Q53FE4 359 aa6.34□□□□□ -1.39
HMGB3P2-201ENST00000411913 SEMA6BQ9H3T3 888 aa6.34□□□□□ -1.39
HMGB3P2-201ENST00000411913 EPXP11678 715 aa6.33□□□□□ -1.4
HMGB3P2-201ENST00000411913 UBAP2LQ14157 1087 aaKnown RBP6.33□□□□□ -1.4
HMGB3P2-201ENST00000411913 XAGE2Q96GT9 111 aa6.33□□□□□ -1.4
HMGB3P2-201ENST00000411913 NEURL1BA8MQ27 555 aa6.32□□□□□ -1.4
HMGB3P2-201ENST00000411913 BNIP3LO60238 219 aa6.32□□□□□ -1.4
HMGB3P2-201ENST00000411913 HOXB4P17483 251 aaPredicted RBP6.32□□□□□ -1.4
HMGB3P2-201ENST00000411913 CHRNA4P43681 627 aa6.32□□□□□ -1.4
HMGB3P2-201ENST00000411913 DOC2BQ14184 412 aa6.32□□□□□ -1.4
HMGB3P2-201ENST00000411913 ESCO1Q5FWF5 840 aa6.32□□□□□ -1.4
HMGB3P2-201ENST00000411913 RNF135Q8IUD6 432 aa6.32□□□□□ -1.4
HMGB3P2-201ENST00000411913 GJD4Q96KN9 370 aaPredicted RBP6.32□□□□□ -1.4
HMGB3P2-201ENST00000411913 ARAFP10398 606 aa6.31□□□□□ -1.4
HMGB3P2-201ENST00000411913 ZMYM1Q5SVZ6 1142 aa6.31□□□□□ -1.4
HMGB3P2-201ENST00000411913 FIGNL1Q6PIW4 674 aa6.31□□□□□ -1.4
HMGB3P2-201ENST00000411913 DGKGP49619 791 aa6.3□□□□□ -1.4
HMGB3P2-201ENST00000411913 RHBDD1Q8TEB9 315 aa6.3□□□□□ -1.4
HMGB3P2-201ENST00000411913 CDCA7Q9BWT1 371 aaPredicted RBP6.3□□□□□ -1.4
HMGB3P2-201ENST00000411913 FHDC1Q9C0D6 1143 aaPredicted RBP6.3□□□□□ -1.4
HMGB3P2-201ENST00000411913 NDFIP2Q9NV92 336 aa6.3□□□□□ -1.4
HMGB3P2-201ENST00000411913 HRH3Q9Y5N1 445 aa6.3□□□□□ -1.4
HMGB3P2-201ENST00000411913 TBC1D9Q6ZT07 1266 aa6.29□□□□□ -1.4
HMGB3P2-201ENST00000411913 CHSY3Q70JA7 882 aa6.29□□□□□ -1.4
HMGB3P2-201ENST00000411913 CRISPLD1Q9H336 500 aa6.29□□□□□ -1.4
HMGB3P2-201ENST00000411913 PCDHGC4Q9Y5F7 938 aa6.29□□□□□ -1.4
HMGB3P2-201ENST00000411913 ADH6P28332 368 aa6.28□□□□□ -1.4
HMGB3P2-201ENST00000411913 GATA4P43694 442 aa6.28□□□□□ -1.4
HMGB3P2-201ENST00000411913 PLA2G4AP47712 749 aa6.28□□□□□ -1.4
HMGB3P2-201ENST00000411913 TLR1Q15399 786 aa6.28□□□□□ -1.4
HMGB3P2-201ENST00000411913 PPARGC1BQ86YN6 1023 aaKnown RBP6.28□□□□□ -1.4
HMGB3P2-201ENST00000411913 CCDC85AQ96PX6 553 aaPredicted RBP6.28□□□□□ -1.4
HMGB3P2-201ENST00000411913 ZCCHC2Q9C0B9 1178 aaKnown RBP6.28□□□□□ -1.4
HMGB3P2-201ENST00000411913 CEP126Q9P2H0 1117 aa6.28□□□□□ -1.4
HMGB3P2-201ENST00000411913 SCO2A0A1W2PP80 73 aa6.27□□□□□ -1.41
HMGB3P2-201ENST00000411913 AIDAQ96BJ3 306 aa6.27□□□□□ -1.41
HMGB3P2-201ENST00000411913 KRTAP9-2Q9BYQ4 174 aa6.27□□□□□ -1.41
HMGB3P2-201ENST00000411913 GOPCQ9HD26 462 aa6.27□□□□□ -1.41
HMGB3P2-201ENST00000411913 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.26□□□□□ -1.41
HMGB3P2-201ENST00000411913 ATXN7O15265 892 aaPredicted RBP6.26□□□□□ -1.41
HMGB3P2-201ENST00000411913 ITGB7P26010 798 aa6.26□□□□□ -1.41
HMGB3P2-201ENST00000411913 USP4Q13107 963 aa6.26□□□□□ -1.41
HMGB3P2-201ENST00000411913 NLRP8Q86W28 1048 aa6.26□□□□□ -1.41
HMGB3P2-201ENST00000411913 PLVAPQ9BX97 442 aa6.26□□□□□ -1.41
HMGB3P2-201ENST00000411913 NDUFB9Q9Y6M9 179 aa6.26□□□□□ -1.41
HMGB3P2-201ENST00000411913 DCDC2BA2VCK2 349 aa6.25□□□□□ -1.41
HMGB3P2-201ENST00000411913 STAU1O95793 577 aaKnown RBP6.25□□□□□ -1.41
HMGB3P2-201ENST00000411913 ARSJQ5FYB0 599 aaPredicted RBP6.25□□□□□ -1.41
HMGB3P2-201ENST00000411913 C1orf216Q8TAB5 229 aa6.25□□□□□ -1.41
HMGB3P2-201ENST00000411913 ETNK1Q9HBU6 452 aa6.25□□□□□ -1.41
HMGB3P2-201ENST00000411913 PRR12Q9ULL5 1215 aa6.25□□□□□ -1.41
HMGB3P2-201ENST00000411913 KRTAP9-6A0A140TA67 174 aa6.24□□□□□ -1.41
HMGB3P2-201ENST00000411913 KHNYNO15037 678 aaKnown RBP6.24□□□□□ -1.41
HMGB3P2-201ENST00000411913 SPATA31C1P0DKV0 1188 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms