RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 C1orf229Q6ZS94 237 aaPredicted RBP6.41□□□□□ -1.38
HMGB3P2-201ENST00000411913 PGBD3Q8N328 593 aa6.41□□□□□ -1.38
HMGB3P2-201ENST00000411913 GOLGA6L1Q8N7Z2 621 aa6.41□□□□□ -1.38
HMGB3P2-201ENST00000411913 TRIM34Q9BYJ4 488 aa6.41□□□□□ -1.38
HMGB3P2-201ENST00000411913 BMP4P12644 408 aa6.4□□□□□ -1.38
HMGB3P2-201ENST00000411913 GPBP1L1Q9HC44 474 aaPredicted RBP6.4□□□□□ -1.38
HMGB3P2-201ENST00000411913 RAB6BQ9NRW1 208 aa6.4□□□□□ -1.38
HMGB3P2-201ENST00000411913 A0A1B0GTH6 734 aa6.39□□□□□ -1.39
HMGB3P2-201ENST00000411913 MCCD1P59942 119 aaPredicted RBP6.39□□□□□ -1.39
HMGB3P2-201ENST00000411913 CENPCQ03188 943 aa6.39□□□□□ -1.39
HMGB3P2-201ENST00000411913 GNASQ5JWF2 1037 aa6.39□□□□□ -1.39
HMGB3P2-201ENST00000411913 ZNF592Q92610 1267 aa6.39□□□□□ -1.39
HMGB3P2-201ENST00000411913 CNKSR1Q969H4 720 aa6.39□□□□□ -1.39
HMGB3P2-201ENST00000411913 ZSCAN10Q96SZ4 725 aaPredicted RBP6.39□□□□□ -1.39
HMGB3P2-201ENST00000411913 KRTAP4-8Q9BYQ9 185 aa6.39□□□□□ -1.39
HMGB3P2-201ENST00000411913 OSBPL3Q9H4L5 887 aa6.39□□□□□ -1.39
HMGB3P2-201ENST00000411913 C1QTNF9BB2RNN3 333 aa6.38□□□□□ -1.39
HMGB3P2-201ENST00000411913 TRAK2O60296 914 aa6.38□□□□□ -1.39
HMGB3P2-201ENST00000411913 THBS1P07996 1170 aa6.38□□□□□ -1.39
HMGB3P2-201ENST00000411913 TMEM259Q4ZIN3 620 aa6.38□□□□□ -1.39
HMGB3P2-201ENST00000411913 EFHC2Q5JST6 749 aa6.38□□□□□ -1.39
HMGB3P2-201ENST00000411913 TMEM214Q6NUQ4 689 aaKnown RBP6.38□□□□□ -1.39
HMGB3P2-201ENST00000411913 ESYT1Q9BSJ8 1104 aa6.38□□□□□ -1.39
HMGB3P2-201ENST00000411913 SUV39H2Q9H5I1 410 aa6.38□□□□□ -1.39
HMGB3P2-201ENST00000411913 ZNF330Q9Y3S2 320 aaPredicted RBP6.38□□□□□ -1.39
HMGB3P2-201ENST00000411913 GNB5O14775 395 aa6.37□□□□□ -1.39
HMGB3P2-201ENST00000411913 GNRH1P01148 92 aa6.37□□□□□ -1.39
HMGB3P2-201ENST00000411913 LBRQ14739 615 aaKnown RBP6.37□□□□□ -1.39
HMGB3P2-201ENST00000411913 LINC00114Q6XXX2 140 aa6.37□□□□□ -1.39
HMGB3P2-201ENST00000411913 PSMG3-AS1Q96PY0 264 aa6.37□□□□□ -1.39
HMGB3P2-201ENST00000411913 RUBCNLQ9H714 662 aa6.37□□□□□ -1.39
HMGB3P2-201ENST00000411913 GGA1Q9UJY5 639 aa6.37□□□□□ -1.39
HMGB3P2-201ENST00000411913 ATXN7L1Q9ULK2 861 aaPredicted RBP6.37□□□□□ -1.39
HMGB3P2-201ENST00000411913 MYCP01106 439 aaPredicted RBP6.36□□□□□ -1.39
HMGB3P2-201ENST00000411913 SLCO4C1Q6ZQN7 724 aa6.36□□□□□ -1.39
HMGB3P2-201ENST00000411913 BTBD6Q96KE9 485 aa6.36□□□□□ -1.39
HMGB3P2-201ENST00000411913 IL2RAP01589 272 aa6.35□□□□□ -1.39
HMGB3P2-201ENST00000411913 FGFR3P22607 806 aa6.35□□□□□ -1.39
HMGB3P2-201ENST00000411913 MSX1P28360 303 aa6.35□□□□□ -1.39
HMGB3P2-201ENST00000411913 NR1H3Q13133 447 aa6.35□□□□□ -1.39
HMGB3P2-201ENST00000411913 CD163Q86VB7 1156 aa6.35□□□□□ -1.39
HMGB3P2-201ENST00000411913 ABHD17AQ96GS6 310 aa6.35□□□□□ -1.39
HMGB3P2-201ENST00000411913 PCMTD1Q96MG8 357 aaPredicted RBP6.35□□□□□ -1.39
HMGB3P2-201ENST00000411913 NOP53Q9NZM5 478 aaKnown RBP6.35□□□□□ -1.39
HMGB3P2-201ENST00000411913 C2CD2LO14523 706 aa6.34□□□□□ -1.39
HMGB3P2-201ENST00000411913 CTBSQ01459 385 aa6.34□□□□□ -1.39
HMGB3P2-201ENST00000411913 C4orf17Q53FE4 359 aa6.34□□□□□ -1.39
HMGB3P2-201ENST00000411913 SEMA6BQ9H3T3 888 aa6.34□□□□□ -1.39
HMGB3P2-201ENST00000411913 EPXP11678 715 aa6.33□□□□□ -1.4
HMGB3P2-201ENST00000411913 UBAP2LQ14157 1087 aaKnown RBP6.33□□□□□ -1.4
HMGB3P2-201ENST00000411913 XAGE2Q96GT9 111 aa6.33□□□□□ -1.4
HMGB3P2-201ENST00000411913 NEURL1BA8MQ27 555 aa6.32□□□□□ -1.4
HMGB3P2-201ENST00000411913 BNIP3LO60238 219 aa6.32□□□□□ -1.4
HMGB3P2-201ENST00000411913 HOXB4P17483 251 aaPredicted RBP6.32□□□□□ -1.4
HMGB3P2-201ENST00000411913 CHRNA4P43681 627 aa6.32□□□□□ -1.4
HMGB3P2-201ENST00000411913 DOC2BQ14184 412 aa6.32□□□□□ -1.4
HMGB3P2-201ENST00000411913 ESCO1Q5FWF5 840 aa6.32□□□□□ -1.4
HMGB3P2-201ENST00000411913 RNF135Q8IUD6 432 aa6.32□□□□□ -1.4
HMGB3P2-201ENST00000411913 GJD4Q96KN9 370 aaPredicted RBP6.32□□□□□ -1.4
HMGB3P2-201ENST00000411913 ARAFP10398 606 aa6.31□□□□□ -1.4
HMGB3P2-201ENST00000411913 ZMYM1Q5SVZ6 1142 aa6.31□□□□□ -1.4
HMGB3P2-201ENST00000411913 FIGNL1Q6PIW4 674 aa6.31□□□□□ -1.4
HMGB3P2-201ENST00000411913 DGKGP49619 791 aa6.3□□□□□ -1.4
HMGB3P2-201ENST00000411913 RHBDD1Q8TEB9 315 aa6.3□□□□□ -1.4
HMGB3P2-201ENST00000411913 CDCA7Q9BWT1 371 aaPredicted RBP6.3□□□□□ -1.4
HMGB3P2-201ENST00000411913 FHDC1Q9C0D6 1143 aaPredicted RBP6.3□□□□□ -1.4
HMGB3P2-201ENST00000411913 NDFIP2Q9NV92 336 aa6.3□□□□□ -1.4
HMGB3P2-201ENST00000411913 HRH3Q9Y5N1 445 aa6.3□□□□□ -1.4
HMGB3P2-201ENST00000411913 TBC1D9Q6ZT07 1266 aa6.29□□□□□ -1.4
HMGB3P2-201ENST00000411913 CHSY3Q70JA7 882 aa6.29□□□□□ -1.4
HMGB3P2-201ENST00000411913 CRISPLD1Q9H336 500 aa6.29□□□□□ -1.4
HMGB3P2-201ENST00000411913 PCDHGC4Q9Y5F7 938 aa6.29□□□□□ -1.4
HMGB3P2-201ENST00000411913 ADH6P28332 368 aa6.28□□□□□ -1.4
HMGB3P2-201ENST00000411913 GATA4P43694 442 aa6.28□□□□□ -1.4
HMGB3P2-201ENST00000411913 PLA2G4AP47712 749 aa6.28□□□□□ -1.4
HMGB3P2-201ENST00000411913 TLR1Q15399 786 aa6.28□□□□□ -1.4
HMGB3P2-201ENST00000411913 PPARGC1BQ86YN6 1023 aaKnown RBP6.28□□□□□ -1.4
HMGB3P2-201ENST00000411913 CCDC85AQ96PX6 553 aaPredicted RBP6.28□□□□□ -1.4
HMGB3P2-201ENST00000411913 ZCCHC2Q9C0B9 1178 aaKnown RBP6.28□□□□□ -1.4
HMGB3P2-201ENST00000411913 CEP126Q9P2H0 1117 aa6.28□□□□□ -1.4
HMGB3P2-201ENST00000411913 SCO2A0A1W2PP80 73 aa6.27□□□□□ -1.41
HMGB3P2-201ENST00000411913 AIDAQ96BJ3 306 aa6.27□□□□□ -1.41
HMGB3P2-201ENST00000411913 KRTAP9-2Q9BYQ4 174 aa6.27□□□□□ -1.41
HMGB3P2-201ENST00000411913 GOPCQ9HD26 462 aa6.27□□□□□ -1.41
HMGB3P2-201ENST00000411913 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.26□□□□□ -1.41
HMGB3P2-201ENST00000411913 ATXN7O15265 892 aaPredicted RBP6.26□□□□□ -1.41
HMGB3P2-201ENST00000411913 ITGB7P26010 798 aa6.26□□□□□ -1.41
HMGB3P2-201ENST00000411913 USP4Q13107 963 aa6.26□□□□□ -1.41
HMGB3P2-201ENST00000411913 NLRP8Q86W28 1048 aa6.26□□□□□ -1.41
HMGB3P2-201ENST00000411913 PLVAPQ9BX97 442 aa6.26□□□□□ -1.41
HMGB3P2-201ENST00000411913 NDUFB9Q9Y6M9 179 aa6.26□□□□□ -1.41
HMGB3P2-201ENST00000411913 DCDC2BA2VCK2 349 aa6.25□□□□□ -1.41
HMGB3P2-201ENST00000411913 STAU1O95793 577 aaKnown RBP6.25□□□□□ -1.41
HMGB3P2-201ENST00000411913 ARSJQ5FYB0 599 aaPredicted RBP6.25□□□□□ -1.41
HMGB3P2-201ENST00000411913 C1orf216Q8TAB5 229 aa6.25□□□□□ -1.41
HMGB3P2-201ENST00000411913 ETNK1Q9HBU6 452 aa6.25□□□□□ -1.41
HMGB3P2-201ENST00000411913 PRR12Q9ULL5 1215 aa6.25□□□□□ -1.41
HMGB3P2-201ENST00000411913 KRTAP9-6A0A140TA67 174 aa6.24□□□□□ -1.41
HMGB3P2-201ENST00000411913 KHNYNO15037 678 aaKnown RBP6.24□□□□□ -1.41
HMGB3P2-201ENST00000411913 SPATA31C1P0DKV0 1188 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms