RNA–Protein interactions for RNA: ENST00000411796.6

CCDC196-203, Transcript of coiled-coil domain containing 196, humanhuman

TSL 1 (best)

Gene CCDC196, Length 1,132 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196-203ENST00000411796 NKTRP30414 1462 aaKnown RBP11.86□□□□□ -0.51
CCDC196-203ENST00000411796 POLR1AO95602 1720 aaPredicted RBP11.86□□□□□ -0.51
CCDC196-203ENST00000411796 CPS1P31327 1500 aa11.86□□□□□ -0.51
CCDC196-203ENST00000411796 EVC2Q86UK5 1308 aa11.86□□□□□ -0.51
CCDC196-203ENST00000411796 NECTIN2Q92692 538 aa11.85□□□□□ -0.51
CCDC196-203ENST00000411796 BEGAINQ9BUH8 593 aa11.85□□□□□ -0.51
CCDC196-203ENST00000411796 NINLQ9Y2I6 1382 aa11.84□□□□□ -0.51
CCDC196-203ENST00000411796 PRAM1Q96QH2 718 aa11.84□□□□□ -0.51
CCDC196-203ENST00000411796 FAM117AQ9C073 453 aa11.83□□□□□ -0.52
CCDC196-203ENST00000411796 PTPRUQ92729 1446 aa11.83□□□□□ -0.52
CCDC196-203ENST00000411796 CHD2O14647 1828 aaKnown RBP11.83□□□□□ -0.52
CCDC196-203ENST00000411796 WASHC2AQ641Q2 1341 aa11.83□□□□□ -0.52
CCDC196-203ENST00000411796 WASLO00401 505 aaPredicted RBP11.82□□□□□ -0.52
CCDC196-203ENST00000411796 NYAP1Q6ZVC0 841 aa11.82□□□□□ -0.52
CCDC196-203ENST00000411796 PROSER2Q86WR7 435 aaPredicted RBP11.82□□□□□ -0.52
CCDC196-203ENST00000411796 DCCP43146 1447 aa11.82□□□□□ -0.52
CCDC196-203ENST00000411796 NWD1Q149M9 1564 aa11.82□□□□□ -0.52
CCDC196-203ENST00000411796 KNDC1Q76NI1 1749 aa11.81□□□□□ -0.52
CCDC196-203ENST00000411796 KMT5BQ4FZB7 885 aa11.81□□□□□ -0.52
CCDC196-203ENST00000411796 STK26Q9P289 416 aa11.81□□□□□ -0.52
CCDC196-203ENST00000411796 BRD4O60885 1362 aaPredicted RBP11.8□□□□□ -0.52
CCDC196-203ENST00000411796 ATAD2Q6PL18 1390 aa11.8□□□□□ -0.52
CCDC196-203ENST00000411796 ROBO2Q9HCK4 1378 aa11.8□□□□□ -0.52
CCDC196-203ENST00000411796 ACTN4O43707 911 aaKnown RBP11.8□□□□□ -0.52
CCDC196-203ENST00000411796 ASXL1Q8IXJ9 1541 aa11.8□□□□□ -0.52
CCDC196-203ENST00000411796 PLEKHG3A1L390 1219 aa11.79□□□□□ -0.52
CCDC196-203ENST00000411796 KDM4AO75164 1064 aa11.79□□□□□ -0.52
CCDC196-203ENST00000411796 WAPLQ7Z5K2 1190 aa11.79□□□□□ -0.52
CCDC196-203ENST00000411796 XRN1Q8IZH2 1706 aaKnown RBP11.78□□□□□ -0.52
CCDC196-203ENST00000411796 FUT2Q10981 343 aa11.78□□□□□ -0.52
CCDC196-203ENST00000411796 SPIRE2Q8WWL2 714 aa11.78□□□□□ -0.52
CCDC196-203ENST00000411796 PRR14Q9BWN1 585 aa11.78□□□□□ -0.52
CCDC196-203ENST00000411796 CDK19Q9BWU1 502 aa11.78□□□□□ -0.52
CCDC196-203ENST00000411796 IL27Q8NEV9 243 aa11.77□□□□□ -0.53
CCDC196-203ENST00000411796 ANKARQ7Z5J8 1434 aa11.77□□□□□ -0.53
CCDC196-203ENST00000411796 ATF3P18847 181 aa11.76□□□□□ -0.53
CCDC196-203ENST00000411796 PUS10Q3MIT2 529 aaKnown RBP11.76□□□□□ -0.53
CCDC196-203ENST00000411796 NUTM1Q86Y26 1132 aa11.76□□□□□ -0.53
CCDC196-203ENST00000411796 ADGRL3Q9HAR2 1447 aa11.76□□□□□ -0.53
CCDC196-203ENST00000411796 TBC1D2Q9BYX2 928 aa11.75□□□□□ -0.53
CCDC196-203ENST00000411796 PCDHB3Q9Y5E6 796 aa11.75□□□□□ -0.53
CCDC196-203ENST00000411796 ADGRB2O60241 1585 aa11.75□□□□□ -0.53
CCDC196-203ENST00000411796 ATP6V1AP38606 617 aa11.74□□□□□ -0.53
CCDC196-203ENST00000411796 DDRGK1Q96HY6 314 aa11.74□□□□□ -0.53
CCDC196-203ENST00000411796 TERF2IPQ9NYB0 399 aa11.74□□□□□ -0.53
CCDC196-203ENST00000411796 MSH6P52701 1360 aa11.74□□□□□ -0.53
CCDC196-203ENST00000411796 TMEM94Q12767 1356 aa11.74□□□□□ -0.53
CCDC196-203ENST00000411796 CCDC7Q96M83 1385 aa11.74□□□□□ -0.53
CCDC196-203ENST00000411796 KIF7Q2M1P5 1343 aa11.73□□□□□ -0.53
CCDC196-203ENST00000411796 HLA-CQ95604 372 aa11.73□□□□□ -0.53
CCDC196-203ENST00000411796 NUDT16Q96DE0 195 aaKnown RBP11.73□□□□□ -0.53
CCDC196-203ENST00000411796 LRRC7Q96NW7 1537 aa11.73□□□□□ -0.53
CCDC196-203ENST00000411796 ARHGEF28Q8N1W1 1705 aaKnown RBP11.72□□□□□ -0.53
CCDC196-203ENST00000411796 NPC1L1Q9UHC9 1359 aa11.72□□□□□ -0.53
CCDC196-203ENST00000411796 C11orf95C9JLR9 678 aaPredicted RBP11.72□□□□□ -0.53
CCDC196-203ENST00000411796 COPS2P61201 443 aa11.72□□□□□ -0.53
CCDC196-203ENST00000411796 USP46P62068 366 aa11.72□□□□□ -0.53
CCDC196-203ENST00000411796 SRPK2P78362 688 aaKnown RBP11.72□□□□□ -0.53
CCDC196-203ENST00000411796 TMEM132AQ24JP5 1023 aa11.72□□□□□ -0.53
CCDC196-203ENST00000411796 TJAP1Q5JTD0 557 aa11.72□□□□□ -0.53
CCDC196-203ENST00000411796 MORN1Q5T089 497 aa11.72□□□□□ -0.53
CCDC196-203ENST00000411796 BLOC1S3Q6QNY0 202 aa11.72□□□□□ -0.53
CCDC196-203ENST00000411796 MTRQ99707 1265 aa11.72□□□□□ -0.53
CCDC196-203ENST00000411796 STRCP1A6NGW2 1772 aa11.72□□□□□ -0.53
CCDC196-203ENST00000411796 PLEKHH1Q9ULM0 1364 aa11.71□□□□□ -0.53
CCDC196-203ENST00000411796 MOXD2PA6NHM9 499 aa11.71□□□□□ -0.53
CCDC196-203ENST00000411796 HOXA2O43364 376 aa11.71□□□□□ -0.53
CCDC196-203ENST00000411796 KTN1Q86UP2 1357 aaKnown RBP11.7□□□□□ -0.54
CCDC196-203ENST00000411796 PER1O15534 1290 aaPredicted RBP11.7□□□□□ -0.54
CCDC196-203ENST00000411796 NDUFV2P19404 249 aa11.7□□□□□ -0.54
CCDC196-203ENST00000411796 SLAIN2Q9P270 581 aa11.7□□□□□ -0.54
CCDC196-203ENST00000411796 CDC42BPGQ6DT37 1551 aa11.7□□□□□ -0.54
CCDC196-203ENST00000411796 POLR3AO14802 1390 aaPredicted RBP11.69□□□□□ -0.54
CCDC196-203ENST00000411796 GUCA2AQ02747 115 aa11.69□□□□□ -0.54
CCDC196-203ENST00000411796 DIXDC1Q155Q3 683 aa11.69□□□□□ -0.54
CCDC196-203ENST00000411796 GRIPAP1Q4V328 841 aa11.69□□□□□ -0.54
CCDC196-203ENST00000411796 MYSM1Q5VVJ2 828 aa11.69□□□□□ -0.54
CCDC196-203ENST00000411796 HDGFL2Q7Z4V5 671 aaPredicted RBP11.69□□□□□ -0.54
CCDC196-203ENST00000411796 C14orf37Q86TY3 774 aa11.69□□□□□ -0.54
CCDC196-203ENST00000411796 SCUBE3Q8IX30 993 aa11.69□□□□□ -0.54
CCDC196-203ENST00000411796 ZNF516Q92618 1163 aa11.69□□□□□ -0.54
CCDC196-203ENST00000411796 SLC27A5Q9Y2P5 690 aa11.69□□□□□ -0.54
CCDC196-203ENST00000411796 ANKRD36BQ8N2N9 1353 aa11.68□□□□□ -0.54
CCDC196-203ENST00000411796 PSME1Q06323 249 aa11.68□□□□□ -0.54
CCDC196-203ENST00000411796 TULP4Q9NRJ4 1543 aa11.68□□□□□ -0.54
CCDC196-203ENST00000411796 SAFB2Q14151 953 aaKnown RBP eCLIP11.67□□□□□ -0.54
CCDC196-203ENST00000411796 RSPH6AQ9H0K4 717 aa11.67□□□□□ -0.54
CCDC196-203ENST00000411796 IL21Q9HBE4 155 aa11.67□□□□□ -0.54
CCDC196-203ENST00000411796 CABP1Q9NZU7 370 aa11.67□□□□□ -0.54
CCDC196-203ENST00000411796 ATP7BP35670 1465 aa11.67□□□□□ -0.54
CCDC196-203ENST00000411796 CPSF1Q10570 1443 aaKnown RBP11.67□□□□□ -0.54
CCDC196-203ENST00000411796 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.66□□□□□ -0.54
CCDC196-203ENST00000411796 TTC21AQ8NDW8 1320 aa11.66□□□□□ -0.54
CCDC196-203ENST00000411796 HIRIP3Q9BW71 556 aaPredicted RBP11.66□□□□□ -0.54
CCDC196-203ENST00000411796 POLR3EQ9NVU0 708 aa11.66□□□□□ -0.54
CCDC196-203ENST00000411796 PCDHGC3Q9UN70 934 aa11.66□□□□□ -0.54
CCDC196-203ENST00000411796 QRICH2Q9H0J4 1663 aa11.65□□□□□ -0.54
CCDC196-203ENST00000411796 ZPR1O75312 459 aa11.65□□□□□ -0.54
CCDC196-203ENST00000411796 NR1I2O75469 434 aa11.65□□□□□ -0.54
CCDC196-203ENST00000411796 ITGBL1O95965 494 aaPredicted RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms