RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 GTF2F1P35269 517 aaKnown RBP eCLIP7.84□□□□□ -1.15
TRAPPC13-202ENST00000399438 UCN2Q96RP3 112 aa7.84□□□□□ -1.15
TRAPPC13-202ENST00000399438 XPCQ01831 940 aaPredicted RBP7.84□□□□□ -1.16
TRAPPC13-202ENST00000399438 EXOC6Q8TAG9 804 aa7.84□□□□□ -1.16
TRAPPC13-202ENST00000399438 ZCRB1Q8TBF4 217 aaKnown RBP7.84□□□□□ -1.16
TRAPPC13-202ENST00000399438 TMC2Q8TDI7 906 aa7.84□□□□□ -1.16
TRAPPC13-202ENST00000399438 SWAP70Q9UH65 585 aa7.84□□□□□ -1.16
TRAPPC13-202ENST00000399438 IQGAP3Q86VI3 1631 aa7.84□□□□□ -1.16
TRAPPC13-202ENST00000399438 VWDEQ8N2E2 1590 aa7.83□□□□□ -1.16
TRAPPC13-202ENST00000399438 WWC3Q9ULE0 1092 aa7.83□□□□□ -1.16
TRAPPC13-202ENST00000399438 RPGRIP1LQ68CZ1 1315 aa7.83□□□□□ -1.16
TRAPPC13-202ENST00000399438 MYSM1Q5VVJ2 828 aa7.83□□□□□ -1.16
TRAPPC13-202ENST00000399438 GGT6Q6P531 493 aa7.83□□□□□ -1.16
TRAPPC13-202ENST00000399438 SPC25Q9HBM1 224 aa7.83□□□□□ -1.16
TRAPPC13-202ENST00000399438 IFT57Q9NWB7 429 aa7.83□□□□□ -1.16
TRAPPC13-202ENST00000399438 DDX56Q9NY93 547 aaKnown RBP7.83□□□□□ -1.16
TRAPPC13-202ENST00000399438 NUDCQ9Y266 331 aa7.83□□□□□ -1.16
TRAPPC13-202ENST00000399438 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.82□□□□□ -1.16
TRAPPC13-202ENST00000399438 ZSWIM4Q9H7M6 989 aa7.82□□□□□ -1.16
TRAPPC13-202ENST00000399438 CALRP27797 417 aaKnown RBP7.82□□□□□ -1.16
TRAPPC13-202ENST00000399438 HELBQ8NG08 1087 aaPredicted RBP7.82□□□□□ -1.16
TRAPPC13-202ENST00000399438 MAP3K20Q9NYL2 800 aaKnown RBP7.82□□□□□ -1.16
TRAPPC13-202ENST00000399438 PLA2R1Q13018 1463 aa7.82□□□□□ -1.16
TRAPPC13-202ENST00000399438 SERPINB4P48594 390 aa7.82□□□□□ -1.16
TRAPPC13-202ENST00000399438 METTL16Q86W50 562 aaKnown RBP7.82□□□□□ -1.16
TRAPPC13-202ENST00000399438 SLC39A13Q96H72 371 aa7.82□□□□□ -1.16
TRAPPC13-202ENST00000399438 SLAIN2Q9P270 581 aa7.82□□□□□ -1.16
TRAPPC13-202ENST00000399438 TFIP11Q9UBB9 837 aaKnown RBP7.82□□□□□ -1.16
TRAPPC13-202ENST00000399438 GLIPR1L2Q4G1C9 344 aa7.81□□□□□ -1.16
TRAPPC13-202ENST00000399438 ARMC5Q96C12 935 aa7.81□□□□□ -1.16
TRAPPC13-202ENST00000399438 ZMIZ1Q9ULJ6 1067 aa7.81□□□□□ -1.16
TRAPPC13-202ENST00000399438 FAM135AQ9P2D6 1515 aa7.81□□□□□ -1.16
TRAPPC13-202ENST00000399438 SOX12O15370 315 aa7.81□□□□□ -1.16
TRAPPC13-202ENST00000399438 STK10O94804 968 aaKnown RBP7.81□□□□□ -1.16
TRAPPC13-202ENST00000399438 ATP2B1P20020 1258 aa7.81□□□□□ -1.16
TRAPPC13-202ENST00000399438 TMEM259Q4ZIN3 620 aa7.81□□□□□ -1.16
TRAPPC13-202ENST00000399438 TMEM164Q5U3C3 297 aa7.81□□□□□ -1.16
TRAPPC13-202ENST00000399438 ZNF622Q969S3 477 aaKnown RBP eCLIP7.81□□□□□ -1.16
TRAPPC13-202ENST00000399438 IL17RAQ96F46 866 aa7.81□□□□□ -1.16
TRAPPC13-202ENST00000399438 ZNF512BQ96KM6 892 aaPredicted RBP7.81□□□□□ -1.16
TRAPPC13-202ENST00000399438 LMTK2Q8IWU2 1503 aa7.81□□□□□ -1.16
TRAPPC13-202ENST00000399438 NUTM2FA1L443 756 aa7.8□□□□□ -1.16
TRAPPC13-202ENST00000399438 HSD3B2P26439 372 aa7.8□□□□□ -1.16
TRAPPC13-202ENST00000399438 RBL2Q08999 1139 aa7.8□□□□□ -1.16
TRAPPC13-202ENST00000399438 MRPL58Q14197 206 aaKnown RBP7.8□□□□□ -1.16
TRAPPC13-202ENST00000399438 PDIA6Q15084 440 aa7.8□□□□□ -1.16
TRAPPC13-202ENST00000399438 TMEM132EQ6IEE7 984 aa7.8□□□□□ -1.16
TRAPPC13-202ENST00000399438 GET4Q7L5D6 327 aaPredicted RBP7.8□□□□□ -1.16
TRAPPC13-202ENST00000399438 SLC43A3Q8NBI5 491 aa7.8□□□□□ -1.16
TRAPPC13-202ENST00000399438 PMFBP1Q8TBY8 1022 aa7.8□□□□□ -1.16
TRAPPC13-202ENST00000399438 TESK2Q96S53 571 aa7.8□□□□□ -1.16
TRAPPC13-202ENST00000399438 MRPL42Q9Y6G3 142 aaKnown RBP7.8□□□□□ -1.16
TRAPPC13-202ENST00000399438 ZC3H13Q5T200 1668 aaKnown RBP7.8□□□□□ -1.16
TRAPPC13-202ENST00000399438 ERBB3P21860 1342 aa7.8□□□□□ -1.16
TRAPPC13-202ENST00000399438 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.8□□□□□ -1.162e-6■■■■■ 149.1
TRAPPC13-202ENST00000399438 TTC36A6NLP5 189 aa7.8□□□□□ -1.16
TRAPPC13-202ENST00000399438 SOCS7O14512 581 aa7.8□□□□□ -1.16
TRAPPC13-202ENST00000399438 SCAMP3O14828 347 aaKnown RBP7.8□□□□□ -1.16
TRAPPC13-202ENST00000399438 C20orf194Q5TEA3 1177 aa7.8□□□□□ -1.16
TRAPPC13-202ENST00000399438 BEGAINQ9BUH8 593 aa7.8□□□□□ -1.16
TRAPPC13-202ENST00000399438 MYBBP1AQ9BQG0 1328 aaKnown RBP7.8□□□□□ -1.16
TRAPPC13-202ENST00000399438 TET3O43151 1660 aa7.79□□□□□ -1.16
TRAPPC13-202ENST00000399438 PAK3O75914 559 aaPredicted RBP7.79□□□□□ -1.16
TRAPPC13-202ENST00000399438 S100BP04271 92 aaPredicted RBP7.79□□□□□ -1.16
TRAPPC13-202ENST00000399438 COPB2P35606 906 aa7.79□□□□□ -1.16
TRAPPC13-202ENST00000399438 FILIP1Q7Z7B0 1213 aa7.79□□□□□ -1.16
TRAPPC13-202ENST00000399438 PCGF5Q86SE9 256 aa7.79□□□□□ -1.16
TRAPPC13-202ENST00000399438 STK32AQ8WU08 396 aa7.79□□□□□ -1.16
TRAPPC13-202ENST00000399438 TMX4Q9H1E5 349 aaPredicted RBP7.79□□□□□ -1.16
TRAPPC13-202ENST00000399438 ADAMTS8Q9UP79 889 aa7.79□□□□□ -1.16
TRAPPC13-202ENST00000399438 ABCC3O15438 1527 aa7.79□□□□□ -1.16
TRAPPC13-202ENST00000399438 CLGNO14967 610 aa7.79□□□□□ -1.16
TRAPPC13-202ENST00000399438 RNF187Q5TA31 235 aaPredicted RBP7.79□□□□□ -1.16
TRAPPC13-202ENST00000399438 NBPF11Q86T75 865 aa7.79□□□□□ -1.16
TRAPPC13-202ENST00000399438 TRIM34Q9BYJ4 488 aa7.79□□□□□ -1.16
TRAPPC13-202ENST00000399438 CEP152O94986 1710 aa7.79□□□□□ -1.16
TRAPPC13-202ENST00000399438 DPYSL4O14531 572 aa7.78□□□□□ -1.16
TRAPPC13-202ENST00000399438 PRC1O43663 620 aa7.78□□□□□ -1.16
TRAPPC13-202ENST00000399438 LMOD3Q0VAK6 560 aa7.78□□□□□ -1.16
TRAPPC13-202ENST00000399438 HIC1Q14526 733 aa7.78□□□□□ -1.16
TRAPPC13-202ENST00000399438 MAP9Q49MG5 647 aa7.78□□□□□ -1.16
TRAPPC13-202ENST00000399438 ZKSCAN2Q63HK3 967 aa7.78□□□□□ -1.16
TRAPPC13-202ENST00000399438 PPP2R2DQ66LE6 453 aa7.78□□□□□ -1.16
TRAPPC13-202ENST00000399438 NT5DC4Q86YG4 428 aa7.78□□□□□ -1.16
TRAPPC13-202ENST00000399438 TSPAN18Q96SJ8 248 aa7.78□□□□□ -1.16
TRAPPC13-202ENST00000399438 TRAK1Q9UPV9 953 aa7.78□□□□□ -1.16
TRAPPC13-202ENST00000399438 KTN1Q86UP2 1357 aaKnown RBP7.78□□□□□ -1.16
TRAPPC13-202ENST00000399438 POLD1P28340 1107 aa7.78□□□□□ -1.16
TRAPPC13-202ENST00000399438 EPAS1Q99814 870 aa7.78□□□□□ -1.16
TRAPPC13-202ENST00000399438 PRAG1Q86YV5 1406 aa7.78□□□□□ -1.16
TRAPPC13-202ENST00000399438 CAMSAP1Q5T5Y3 1602 aa7.78□□□□□ -1.16
TRAPPC13-202ENST00000399438 CLK2P49760 499 aaKnown RBP7.78□□□□□ -1.16
TRAPPC13-202ENST00000399438 CSPP1Q1MSJ5 1256 aa7.78□□□□□ -1.16
TRAPPC13-202ENST00000399438 INO80BQ9C086 356 aaPredicted RBP7.78□□□□□ -1.16
TRAPPC13-202ENST00000399438 TPX2Q9ULW0 747 aaKnown RBP7.78□□□□□ -1.16
TRAPPC13-202ENST00000399438 RRP7AQ9Y3A4 280 aaKnown RBP7.78□□□□□ -1.16
TRAPPC13-202ENST00000399438 KANK1Q14678 1352 aa7.78□□□□□ -1.16
TRAPPC13-202ENST00000399438 RALGAPBQ86X10 1494 aa7.77□□□□□ -1.16
TRAPPC13-202ENST00000399438 EFCAB6Q5THR3 1501 aa7.77□□□□□ -1.16
TRAPPC13-202ENST00000399438 E9PCH4 1651 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms