RNA–Protein interactions for RNA: ENST00000398017.2

CHEK2-205, Transcript of checkpoint kinase 2, humanhuman

TSL 5

Gene CHEK2, Length 713 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-205ENST00000398017 MYT1Q01538 1121 aa11.33□□□□□ -0.6
CHEK2-205ENST00000398017 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.33□□□□□ -0.6
CHEK2-205ENST00000398017 PRDM11Q9NQV5 511 aa11.33□□□□□ -0.6
CHEK2-205ENST00000398017 NPDC1Q9NQX5 325 aaPredicted RBP11.33□□□□□ -0.6
CHEK2-205ENST00000398017 BTG4Q9NY30 223 aa11.33□□□□□ -0.6
CHEK2-205ENST00000398017 KIAA1468Q9P260 1216 aa11.33□□□□□ -0.6
CHEK2-205ENST00000398017 USP32Q8NFA0 1604 aa11.33□□□□□ -0.6
CHEK2-205ENST00000398017 PPIP5K1Q6PFW1 1433 aa11.33□□□□□ -0.6
CHEK2-205ENST00000398017 ITSN1Q15811 1721 aa11.32□□□□□ -0.6
CHEK2-205ENST00000398017 LRP5O75197 1615 aa11.32□□□□□ -0.6
CHEK2-205ENST00000398017 ZC3H6P61129 1189 aaKnown RBP11.32□□□□□ -0.6
CHEK2-205ENST00000398017 VPS72Q15906 364 aa11.32□□□□□ -0.6
CHEK2-205ENST00000398017 LAPTM4BQ86VI4 370 aa11.32□□□□□ -0.6
CHEK2-205ENST00000398017 ZBTB7CA1YPR0 619 aa11.31□□□□□ -0.6
CHEK2-205ENST00000398017 ZNF784Q8NCA9 323 aaPredicted RBP11.31□□□□□ -0.6
CHEK2-205ENST00000398017 TMC1Q8TDI8 760 aa11.31□□□□□ -0.6
CHEK2-205ENST00000398017 MARF1Q9Y4F3 1742 aaKnown RBP11.31□□□□□ -0.6
CHEK2-205ENST00000398017 BCL9LQ86UU0 1499 aa11.31□□□□□ -0.6
CHEK2-205ENST00000398017 POLR3AO14802 1390 aaPredicted RBP11.3□□□□□ -0.6
CHEK2-205ENST00000398017 ATRNO75882 1429 aa11.3□□□□□ -0.6
CHEK2-205ENST00000398017 BHMG1C9JSJ3 638 aaPredicted RBP11.3□□□□□ -0.6
CHEK2-205ENST00000398017 TIMELESSQ9UNS1 1208 aa11.3□□□□□ -0.6
CHEK2-205ENST00000398017 TRPM1Q7Z4N2 1603 aa11.3□□□□□ -0.6
CHEK2-205ENST00000398017 ATP7BP35670 1465 aa11.3□□□□□ -0.6
CHEK2-205ENST00000398017 BRD4O60885 1362 aaPredicted RBP11.29□□□□□ -0.6
CHEK2-205ENST00000398017 GNPATO15228 680 aa11.29□□□□□ -0.6
CHEK2-205ENST00000398017 SF3B2Q13435 895 aaKnown RBP11.29□□□□□ -0.6
CHEK2-205ENST00000398017 PADI6Q6TGC4 694 aa11.29□□□□□ -0.6
CHEK2-205ENST00000398017 HDGFL2Q7Z4V5 671 aaPredicted RBP11.29□□□□□ -0.6
CHEK2-205ENST00000398017 CCDC125Q86Z20 511 aa11.29□□□□□ -0.6
CHEK2-205ENST00000398017 SEPT12Q8IYM1 358 aa11.29□□□□□ -0.6
CHEK2-205ENST00000398017 CCER1Q8TC90 406 aaPredicted RBP11.29□□□□□ -0.6
CHEK2-205ENST00000398017 STRN4Q9NRL3 753 aa11.29□□□□□ -0.6
CHEK2-205ENST00000398017 TSKSQ9UJT2 592 aa11.29□□□□□ -0.6
CHEK2-205ENST00000398017 ATAD2Q6PL18 1390 aa11.28□□□□□ -0.6
CHEK2-205ENST00000398017 QRICH2Q9H0J4 1663 aa11.28□□□□□ -0.6
CHEK2-205ENST00000398017 CHRNA2Q15822 529 aa11.28□□□□□ -0.6
CHEK2-205ENST00000398017 SLIT2O94813 1529 aa11.28□□□□□ -0.6
CHEK2-205ENST00000398017 GCP02774 474 aa11.27□□□□□ -0.61
CHEK2-205ENST00000398017 FAM98CQ17RN3 349 aaKnown RBP11.27□□□□□ -0.61
CHEK2-205ENST00000398017 RNF166Q96A37 237 aaPredicted RBP11.27□□□□□ -0.61
CHEK2-205ENST00000398017 TERF2IPQ9NYB0 399 aa11.27□□□□□ -0.61
CHEK2-205ENST00000398017 RGS12O14924 1447 aa11.26□□□□□ -0.61
CHEK2-205ENST00000398017 ST20-MTHFSA0A0A6YYL1 179 aa11.26□□□□□ -0.61
CHEK2-205ENST00000398017 TTC13Q8NBP0 860 aa11.26□□□□□ -0.61
CHEK2-205ENST00000398017 KCNH5Q8NCM2 988 aa11.26□□□□□ -0.61
CHEK2-205ENST00000398017 TATDN2Q93075 761 aa11.26□□□□□ -0.61
CHEK2-205ENST00000398017 PLSCR2Q9NRY7 297 aa11.26□□□□□ -0.61
CHEK2-205ENST00000398017 PNMA3Q9UL41 463 aa11.26□□□□□ -0.61
CHEK2-205ENST00000398017 CLSPNQ9HAW4 1339 aa11.26□□□□□ -0.61
CHEK2-205ENST00000398017 TRPM3Q9HCF6 1732 aaPredicted RBP11.26□□□□□ -0.61
CHEK2-205ENST00000398017 KRT27Q7Z3Y8 459 aa11.25□□□□□ -0.61
CHEK2-205ENST00000398017 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.25□□□□□ -0.61
CHEK2-205ENST00000398017 RBM46Q8TBY0 533 aaKnown RBP11.25□□□□□ -0.61
CHEK2-205ENST00000398017 PUS7Q96PZ0 661 aaKnown RBP11.25□□□□□ -0.61
CHEK2-205ENST00000398017 USP35Q9P2H5 1018 aa11.25□□□□□ -0.61
CHEK2-205ENST00000398017 KTN1Q86UP2 1357 aaKnown RBP11.25□□□□□ -0.61
CHEK2-205ENST00000398017 KIAA0232Q92628 1395 aa11.25□□□□□ -0.61
CHEK2-205ENST00000398017 RALGAPBQ86X10 1494 aa11.25□□□□□ -0.61
CHEK2-205ENST00000398017 ALS2Q96Q42 1657 aa11.24□□□□□ -0.61
CHEK2-205ENST00000398017 SLC4A3P48751 1232 aa11.24□□□□□ -0.61
CHEK2-205ENST00000398017 TMF1P82094 1093 aa11.24□□□□□ -0.61
CHEK2-205ENST00000398017 MMRN1Q13201 1228 aa11.24□□□□□ -0.61
CHEK2-205ENST00000398017 CDCA8Q53HL2 280 aa11.24□□□□□ -0.61
CHEK2-205ENST00000398017 ANKK1Q8NFD2 765 aa11.24□□□□□ -0.61
CHEK2-205ENST00000398017 TTC21BQ7Z4L5 1316 aa11.24□□□□□ -0.61
CHEK2-205ENST00000398017 TTC21AQ8NDW8 1320 aa11.24□□□□□ -0.61
CHEK2-205ENST00000398017 OATP04181 439 aa11.23□□□□□ -0.61
CHEK2-205ENST00000398017 PRELPP51888 382 aa11.23□□□□□ -0.61
CHEK2-205ENST00000398017 NUDT18Q6ZVK8 323 aa11.23□□□□□ -0.61
CHEK2-205ENST00000398017 SLC12A5Q9H2X9 1139 aa11.23□□□□□ -0.61
CHEK2-205ENST00000398017 COL14A1Q05707 1796 aaKnown RBP11.23□□□□□ -0.61
CHEK2-205ENST00000398017 USP6P35125 1406 aa11.22□□□□□ -0.61
CHEK2-205ENST00000398017 PDE3BQ13370 1112 aa11.22□□□□□ -0.61
CHEK2-205ENST00000398017 SPATA31A5Q5VU36 1347 aa11.22□□□□□ -0.61
CHEK2-205ENST00000398017 SPATA31A7Q8IWB4 1347 aa11.22□□□□□ -0.61
CHEK2-205ENST00000398017 WNT2BQ93097 391 aa11.22□□□□□ -0.61
CHEK2-205ENST00000398017 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.22□□□□□ -0.61
CHEK2-205ENST00000398017 SEPT9Q9UHD8 586 aaPredicted RBP11.22□□□□□ -0.61
CHEK2-205ENST00000398017 NWD2Q9ULI1 1742 aa11.22□□□□□ -0.61
CHEK2-205ENST00000398017 TOPAZ1Q8N9V7 1692 aa11.21□□□□□ -0.61
CHEK2-205ENST00000398017 SBNO2Q9Y2G9 1366 aa11.21□□□□□ -0.61
CHEK2-205ENST00000398017 GPR37O15354 613 aa11.21□□□□□ -0.61
CHEK2-205ENST00000398017 CSB-PGBD3P0DP91 1061 aa11.21□□□□□ -0.61
CHEK2-205ENST00000398017 PLCH1Q4KWH8 1693 aa11.2□□□□□ -0.62
CHEK2-205ENST00000398017 USP19O94966 1318 aa11.2□□□□□ -0.62
CHEK2-205ENST00000398017 SPATA31A1Q5TZJ5 1347 aa11.2□□□□□ -0.62
CHEK2-205ENST00000398017 TOM1L2Q6ZVM7 507 aa11.2□□□□□ -0.62
CHEK2-205ENST00000398017 TCP11L2Q8N4U5 519 aa11.2□□□□□ -0.62
CHEK2-205ENST00000398017 ZFRQ96KR1 1074 aaKnown RBP11.2□□□□□ -0.62
CHEK2-205ENST00000398017 FAM198AQ9UFP1 575 aa11.2□□□□□ -0.62
CHEK2-205ENST00000398017 ABCA3Q99758 1704 aa11.19□□□□□ -0.62
CHEK2-205ENST00000398017 LARP1Q6PKG0 1096 aaKnown RBP11.19□□□□□ -0.62
CHEK2-205ENST00000398017 KCTD12Q96CX2 325 aaKnown RBP11.19□□□□□ -0.62
CHEK2-205ENST00000398017 THRAP3Q9Y2W1 955 aaKnown RBP11.19□□□□□ -0.62
CHEK2-205ENST00000398017 CPDO75976 1380 aa11.18□□□□□ -0.62
CHEK2-205ENST00000398017 MAP2K5Q13163 448 aa11.18□□□□□ -0.62
CHEK2-205ENST00000398017 BARGINQ6ZT62 677 aa11.18□□□□□ -0.62
CHEK2-205ENST00000398017 NECTIN2Q92692 538 aa11.18□□□□□ -0.62
CHEK2-205ENST00000398017 LRCH3Q96II8 777 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms