RNA–Protein interactions for RNA: ENST00000397893.3

SUMO3-202, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 2 BASIC

Gene SUMO3, Length 520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-202ENST00000397893 TOGARAM1Q9Y4F4 1720 aa9.42□□□□□ -0.9
SUMO3-202ENST00000397893 HMGB2P26583 209 aaKnown RBP9.41□□□□□ -0.9
SUMO3-202ENST00000397893 TNNT2P45379 298 aaPredicted RBP9.41□□□□□ -0.9
SUMO3-202ENST00000397893 GPR162Q16538 588 aa9.41□□□□□ -0.9
SUMO3-202ENST00000397893 MSL1Q68DK7 614 aa9.41□□□□□ -0.9
SUMO3-202ENST00000397893 IFNL2Q8IZJ0 200 aa9.41□□□□□ -0.9
SUMO3-202ENST00000397893 SLC4A9Q96Q91 983 aa9.41□□□□□ -0.9
SUMO3-202ENST00000397893 SUPT16HQ9Y5B9 1047 aaKnown RBP9.41□□□□□ -0.9
SUMO3-202ENST00000397893 MYCNP04198 464 aaPredicted RBP9.4□□□□□ -0.9
SUMO3-202ENST00000397893 KLHL34Q8N239 644 aa9.4□□□□□ -0.9
SUMO3-202ENST00000397893 POLR3GLQ9BT43 218 aa9.4□□□□□ -0.9
SUMO3-202ENST00000397893 TMOD3Q9NYL9 352 aa9.4□□□□□ -0.9
SUMO3-202ENST00000397893 CD2APQ9Y5K6 639 aa9.4□□□□□ -0.9
SUMO3-202ENST00000397893 KDRP35968 1356 aa9.39□□□□□ -0.91
SUMO3-202ENST00000397893 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.39□□□□□ -0.91
SUMO3-202ENST00000397893 FKBP8Q14318 412 aa9.39□□□□□ -0.91
SUMO3-202ENST00000397893 MAP2P11137 1827 aaKnown RBP9.39□□□□□ -0.91
SUMO3-202ENST00000397893 ERVV-2B6SEH9 535 aa9.38□□□□□ -0.91
SUMO3-202ENST00000397893 SSFA2P28290 1259 aa9.38□□□□□ -0.91
SUMO3-202ENST00000397893 IL13P35225 146 aa9.38□□□□□ -0.91
SUMO3-202ENST00000397893 AEBP1Q8IUX7 1158 aa9.38□□□□□ -0.91
SUMO3-202ENST00000397893 DCAF5Q96JK2 942 aa9.38□□□□□ -0.91
SUMO3-202ENST00000397893 AK7Q96M32 723 aa9.38□□□□□ -0.91
SUMO3-202ENST00000397893 C4BP0C0L5 1744 aa9.38□□□□□ -0.91
SUMO3-202ENST00000397893 KDM6AO15550 1401 aaPredicted RBP9.38□□□□□ -0.91
SUMO3-202ENST00000397893 C5P01031 1676 aa9.37□□□□□ -0.91
SUMO3-202ENST00000397893 PER1O15534 1290 aaPredicted RBP9.37□□□□□ -0.91
SUMO3-202ENST00000397893 GRIN3BO60391 1043 aa9.37□□□□□ -0.91
SUMO3-202ENST00000397893 ATP6V1AP38606 617 aa9.37□□□□□ -0.91
SUMO3-202ENST00000397893 PLEKHO1Q53GL0 409 aaPredicted RBP9.37□□□□□ -0.91
SUMO3-202ENST00000397893 ITGB4P16144 1822 aa9.37□□□□□ -0.91
SUMO3-202ENST00000397893 TAF1LQ8IZX4 1826 aa9.36□□□□□ -0.91
SUMO3-202ENST00000397893 PHF14O94880 888 aa9.36□□□□□ -0.91
SUMO3-202ENST00000397893 C1QTNF8P60827 252 aa9.36□□□□□ -0.91
SUMO3-202ENST00000397893 AMOTQ4VCS5 1084 aa9.36□□□□□ -0.91
SUMO3-202ENST00000397893 RC3H1Q5TC82 1133 aaKnown RBP9.36□□□□□ -0.91
SUMO3-202ENST00000397893 MORC1Q86VD1 984 aa9.36□□□□□ -0.91
SUMO3-202ENST00000397893 KIF7Q2M1P5 1343 aa9.35□□□□□ -0.91
SUMO3-202ENST00000397893 GNPATO15228 680 aa9.35□□□□□ -0.91
SUMO3-202ENST00000397893 HSP90AB1P08238 724 aaKnown RBP9.35□□□□□ -0.91
SUMO3-202ENST00000397893 ZNF530Q6P9A1 599 aaPredicted RBP9.35□□□□□ -0.91
SUMO3-202ENST00000397893 CHD4Q14839 1912 aa9.35□□□□□ -0.91
SUMO3-202ENST00000397893 CNTNAP4Q9C0A0 1308 aa9.34□□□□□ -0.91
SUMO3-202ENST00000397893 UBR3Q6ZT12 1888 aa9.34□□□□□ -0.91
SUMO3-202ENST00000397893 RPS6KA4O75676 772 aa9.34□□□□□ -0.91
SUMO3-202ENST00000397893 SULT6B1Q6IMI4 303 aa9.34□□□□□ -0.91
SUMO3-202ENST00000397893 KNSTRNQ9Y448 316 aa9.34□□□□□ -0.91
SUMO3-202ENST00000397893 NEFLP07196 543 aa9.33□□□□□ -0.92
SUMO3-202ENST00000397893 MMP10P09238 476 aa9.33□□□□□ -0.92
SUMO3-202ENST00000397893 MTHFSP49914 203 aa9.33□□□□□ -0.92
SUMO3-202ENST00000397893 CABP4P57796 275 aa9.33□□□□□ -0.92
SUMO3-202ENST00000397893 TRAPPC3LQ5T215 181 aa9.33□□□□□ -0.92
SUMO3-202ENST00000397893 ARHGEF1Q92888 912 aaKnown RBP9.33□□□□□ -0.92
SUMO3-202ENST00000397893 RTCBQ9Y3I0 505 aaKnown RBP9.33□□□□□ -0.92
SUMO3-202ENST00000397893 ADCY9O60503 1353 aa9.33□□□□□ -0.92
SUMO3-202ENST00000397893 GYS1P13807 737 aa9.32□□□□□ -0.92
SUMO3-202ENST00000397893 NLGN1Q8N2Q7 840 aa9.32□□□□□ -0.92
SUMO3-202ENST00000397893 NFATC2IPQ8NCF5 419 aa9.32□□□□□ -0.92
SUMO3-202ENST00000397893 RBM42Q9BTD8 480 aaKnown RBP9.32□□□□□ -0.92
SUMO3-202ENST00000397893 CEP350Q5VT06 3117 aa9.31□□□□□ -0.92
SUMO3-202ENST00000397893 ANP32CO43423 234 aa9.31□□□□□ -0.92
SUMO3-202ENST00000397893 INTS5Q6P9B9 1019 aaKnown RBP9.31□□□□□ -0.92
SUMO3-202ENST00000397893 LGR6Q9HBX8 967 aa9.31□□□□□ -0.92
SUMO3-202ENST00000397893 ATP10DQ9P241 1426 aa9.31□□□□□ -0.92
SUMO3-202ENST00000397893 ZNF831Q5JPB2 1677 aa9.3□□□□□ -0.92
SUMO3-202ENST00000397893 PXDNLA1KZ92 1463 aa9.3□□□□□ -0.92
SUMO3-202ENST00000397893 CCER2I3L3R5 266 aa9.3□□□□□ -0.92
SUMO3-202ENST00000397893 PTCD1O75127 700 aaKnown RBP9.3□□□□□ -0.92
SUMO3-202ENST00000397893 KCNA3P22001 575 aa9.3□□□□□ -0.92
SUMO3-202ENST00000397893 CRKLP46109 303 aaKnown RBP9.3□□□□□ -0.92
SUMO3-202ENST00000397893 DDX10Q13206 875 aaKnown RBP9.3□□□□□ -0.92
SUMO3-202ENST00000397893 AKAP4Q5JQC9 854 aa9.3□□□□□ -0.92
SUMO3-202ENST00000397893 C1orf141Q5JVX7 400 aa9.3□□□□□ -0.92
SUMO3-202ENST00000397893 C10orf71Q711Q0 1435 aa9.3□□□□□ -0.92
SUMO3-202ENST00000397893 SENP3-EIF4A1A0A087X0R7 540 aa9.29□□□□□ -0.92
SUMO3-202ENST00000397893 RNMTO43148 476 aaKnown RBP9.29□□□□□ -0.92
SUMO3-202ENST00000397893 GIGYF1O75420 1035 aaPredicted RBP9.29□□□□□ -0.92
SUMO3-202ENST00000397893 TGFB2P61812 414 aa9.29□□□□□ -0.92
SUMO3-202ENST00000397893 SLC52A2Q9HAB3 445 aa9.29□□□□□ -0.92
SUMO3-202ENST00000397893 WWC3Q9ULE0 1092 aa9.29□□□□□ -0.92
SUMO3-202ENST00000397893 MYH14Q7Z406 1995 aaKnown RBP9.29□□□□□ -0.92
SUMO3-202ENST00000397893 NPC1L1Q9UHC9 1359 aa9.28□□□□□ -0.92
SUMO3-202ENST00000397893 A0A0G2JLW4 131 aa9.28□□□□□ -0.92
SUMO3-202ENST00000397893 HMOX1P09601 288 aa9.28□□□□□ -0.92
SUMO3-202ENST00000397893 DPEP1P16444 411 aa9.28□□□□□ -0.92
SUMO3-202ENST00000397893 RFC4P35249 363 aa9.28□□□□□ -0.92
SUMO3-202ENST00000397893 DDR1Q08345 913 aa9.28□□□□□ -0.92
SUMO3-202ENST00000397893 MTHFSDQ2M296 383 aaKnown RBP9.28□□□□□ -0.92
SUMO3-202ENST00000397893 DNAJC10Q8IXB1 793 aa9.28□□□□□ -0.92
SUMO3-202ENST00000397893 SRP68Q9UHB9 627 aaKnown RBP9.28□□□□□ -0.92
SUMO3-202ENST00000397893 USP42Q9H9J4 1324 aaKnown RBP9.28□□□□□ -0.92
SUMO3-202ENST00000397893 COL3A1P02461 1466 aaPredicted RBP9.28□□□□□ -0.92
SUMO3-202ENST00000397893 CYP19A1P11511 503 aaPredicted RBP9.27□□□□□ -0.93
SUMO3-202ENST00000397893 TM4SF1P30408 202 aa9.27□□□□□ -0.93
SUMO3-202ENST00000397893 SLC39A6Q13433 755 aa9.27□□□□□ -0.93
SUMO3-202ENST00000397893 CC2D1BQ5T0F9 858 aaKnown RBP9.27□□□□□ -0.93
SUMO3-202ENST00000397893 TSHZ2Q9NRE2 1034 aa9.27□□□□□ -0.93
SUMO3-202ENST00000397893 KIAA1551Q9HCM1 1747 aa9.27□□□□□ -0.93
SUMO3-202ENST00000397893 MRC1P22897 1456 aa9.27□□□□□ -0.93
SUMO3-202ENST00000397893 COL5A3P25940 1745 aaPredicted RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms