RNA–Protein interactions for RNA: ENST00000395892.5

CLIC1-209, Transcript of chloride intracellular channel 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLIC1, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1-209ENST00000395892 PKD1L3Q7Z443 1732 aa17.14■□□□□ 0.33
CLIC1-209ENST00000395892 PHKG2P15735 406 aa17.14■□□□□ 0.33
CLIC1-209ENST00000395892 EIF4A1P60842 406 aaKnown RBP17.14■□□□□ 0.33
CLIC1-209ENST00000395892 SPG7Q9UQ90 795 aa17.14■□□□□ 0.33
CLIC1-209ENST00000395892 SIPA1L3O60292 1781 aaPredicted RBP17.14■□□□□ 0.33
CLIC1-209ENST00000395892 SOCS7O14512 581 aa17.13■□□□□ 0.33
CLIC1-209ENST00000395892 CYP27B1O15528 508 aa17.13■□□□□ 0.33
CLIC1-209ENST00000395892 KCNQ3O43525 872 aa17.13■□□□□ 0.33
CLIC1-209ENST00000395892 CENPQQ7L2Z9 268 aaPredicted RBP17.13■□□□□ 0.33
CLIC1-209ENST00000395892 FTSJ3Q8IY81 847 aaKnown RBP17.13■□□□□ 0.33
CLIC1-209ENST00000395892 ABCC4O15439 1325 aa17.13■□□□□ 0.33
CLIC1-209ENST00000395892 COL16A1Q07092 1604 aaPredicted RBP17.12■□□□□ 0.33
CLIC1-209ENST00000395892 TOM1O60784 492 aa17.12■□□□□ 0.33
CLIC1-209ENST00000395892 LARP1Q6PKG0 1096 aaKnown RBP17.12■□□□□ 0.33
CLIC1-209ENST00000395892 HEG1Q9ULI3 1381 aa17.12■□□□□ 0.33
CLIC1-209ENST00000395892 KDM6AO15550 1401 aaPredicted RBP17.12■□□□□ 0.33
CLIC1-209ENST00000395892 SCN11AQ9UI33 1791 aa17.11■□□□□ 0.33
CLIC1-209ENST00000395892 ZBTB7BO15156 539 aaPredicted RBP17.11■□□□□ 0.33
CLIC1-209ENST00000395892 TOM1L2Q6ZVM7 507 aa17.11■□□□□ 0.33
CLIC1-209ENST00000395892 IFNL2Q8IZJ0 200 aa17.11■□□□□ 0.33
CLIC1-209ENST00000395892 API5Q9BZZ5 524 aaKnown RBP17.11■□□□□ 0.33
CLIC1-209ENST00000395892 ZBTB40Q9NUA8 1239 aa17.11■□□□□ 0.33
CLIC1-209ENST00000395892 DDX19BQ9UMR2 479 aa17.11■□□□□ 0.33
CLIC1-209ENST00000395892 RGS12O14924 1447 aa17.11■□□□□ 0.33
CLIC1-209ENST00000395892 PHLPP1O60346 1717 aa17.1■□□□□ 0.33
CLIC1-209ENST00000395892 BTBD11A6QL63 1104 aa17.1■□□□□ 0.33
CLIC1-209ENST00000395892 TEFQ10587 303 aa17.1■□□□□ 0.33
CLIC1-209ENST00000395892 G2E3Q7L622 706 aa17.1■□□□□ 0.33
CLIC1-209ENST00000395892 EVA1CP58658 441 aa17.09■□□□□ 0.33
CLIC1-209ENST00000395892 COL14A1Q05707 1796 aaKnown RBP17.09■□□□□ 0.33
CLIC1-209ENST00000395892 PTPRCP08575 1304 aa17.08■□□□□ 0.32
CLIC1-209ENST00000395892 INTS3Q68E01 1043 aaKnown RBP17.08■□□□□ 0.32
CLIC1-209ENST00000395892 ITPRIPQ8IWB1 547 aa17.08■□□□□ 0.32
CLIC1-209ENST00000395892 BTG4Q9NY30 223 aa17.08■□□□□ 0.32
CLIC1-209ENST00000395892 CACNA1FO60840 1977 aa17.08■□□□□ 0.32
CLIC1-209ENST00000395892 HOXB7P09629 217 aa17.07■□□□□ 0.32
CLIC1-209ENST00000395892 DSG3P32926 999 aa17.07■□□□□ 0.32
CLIC1-209ENST00000395892 NKX1-1Q15270 411 aaPredicted RBP17.07■□□□□ 0.32
CLIC1-209ENST00000395892 CCDC30Q5VVM6 783 aa17.07■□□□□ 0.32
CLIC1-209ENST00000395892 ZCRB1Q8TBF4 217 aaKnown RBP17.07■□□□□ 0.32
CLIC1-209ENST00000395892 DCAF5Q96JK2 942 aa17.07■□□□□ 0.32
CLIC1-209ENST00000395892 SLC52A2Q9HAB3 445 aa17.07■□□□□ 0.32
CLIC1-209ENST00000395892 STRN4Q9NRL3 753 aa17.07■□□□□ 0.32
CLIC1-209ENST00000395892 PARP4Q9UKK3 1724 aaKnown RBP17.07■□□□□ 0.32
CLIC1-209ENST00000395892 IL2RBP14784 551 aa17.06■□□□□ 0.32
CLIC1-209ENST00000395892 PIP4K2BP78356 416 aa17.05■□□□□ 0.32
CLIC1-209ENST00000395892 SKAP1Q86WV1 359 aa17.05■□□□□ 0.32
CLIC1-209ENST00000395892 MRC1P22897 1456 aa17.05■□□□□ 0.32
CLIC1-209ENST00000395892 SHANK3Q9BYB0 1731 aa17.04■□□□□ 0.32
CLIC1-209ENST00000395892 GIGYF1O75420 1035 aaPredicted RBP17.04■□□□□ 0.32
CLIC1-209ENST00000395892 HSP90AB1P08238 724 aaKnown RBP17.04■□□□□ 0.32
CLIC1-209ENST00000395892 ILDR2Q71H61 639 aa17.04■□□□□ 0.32
CLIC1-209ENST00000395892 NFATC2IPQ8NCF5 419 aa17.04■□□□□ 0.32
CLIC1-209ENST00000395892 HDAC1Q13547 482 aaPredicted RBP17.03■□□□□ 0.32
CLIC1-209ENST00000395892 UBAP1LF5GYI3 381 aa17.02■□□□□ 0.32
CLIC1-209ENST00000395892 STK31Q9BXU1 1019 aa17.02■□□□□ 0.32
CLIC1-209ENST00000395892 RWDD1Q9H446 243 aaPredicted RBP17.02■□□□□ 0.32
CLIC1-209ENST00000395892 DISP2A7MBM2 1401 aa17.02■□□□□ 0.31
CLIC1-209ENST00000395892 HDGFL1Q5TGJ6 251 aa17.01■□□□□ 0.31
CLIC1-209ENST00000395892 ZNF790Q6PG37 636 aa17.01■□□□□ 0.31
CLIC1-209ENST00000395892 NECTIN2Q92692 538 aa17.01■□□□□ 0.31
CLIC1-209ENST00000395892 PCDH11XQ9BZA7 1347 aa17■□□□□ 0.31
CLIC1-209ENST00000395892 PCDH11YQ9BZA8 1340 aa17■□□□□ 0.31
CLIC1-209ENST00000395892 FLIIQ13045 1269 aa17■□□□□ 0.31
CLIC1-209ENST00000395892 SLC39A6Q13433 755 aa17■□□□□ 0.31
CLIC1-209ENST00000395892 CHMP4BQ9H444 224 aaKnown RBP17■□□□□ 0.31
CLIC1-209ENST00000395892 PRAMEF22A3QJZ6 481 aa16.99■□□□□ 0.31
CLIC1-209ENST00000395892 ERVV-2B6SEH9 535 aa16.99■□□□□ 0.31
CLIC1-209ENST00000395892 F6X3S4 739 aa16.99■□□□□ 0.31
CLIC1-209ENST00000395892 CHMP4AQ9BY43 222 aa16.99■□□□□ 0.31
CLIC1-209ENST00000395892 PHAXQ9H814 394 aaKnown RBP16.99■□□□□ 0.31
CLIC1-209ENST00000395892 EIF2S2P20042 333 aaKnown RBP16.98■□□□□ 0.31
CLIC1-209ENST00000395892 CABP4P57796 275 aa16.98■□□□□ 0.31
CLIC1-209ENST00000395892 SIRT2Q8IXJ6 389 aa16.98■□□□□ 0.31
CLIC1-209ENST00000395892 CERKQ8TCT0 537 aa16.98■□□□□ 0.31
CLIC1-209ENST00000395892 NRAPQ86VF7 1730 aa16.98■□□□□ 0.31
CLIC1-209ENST00000395892 ADAMTS2O95450 1211 aa16.97■□□□□ 0.31
CLIC1-209ENST00000395892 SMC5Q8IY18 1101 aa16.97■□□□□ 0.31
CLIC1-209ENST00000395892 CHPF2Q9P2E5 772 aa16.97■□□□□ 0.31
CLIC1-209ENST00000395892 PLCH1Q4KWH8 1693 aa16.97■□□□□ 0.31
CLIC1-209ENST00000395892 PDIA6Q15084 440 aa16.96■□□□□ 0.31
CLIC1-209ENST00000395892 ZNF496Q96IT1 587 aaPredicted RBP16.96■□□□□ 0.31
CLIC1-209ENST00000395892 USP35Q9P2H5 1018 aa16.96■□□□□ 0.31
CLIC1-209ENST00000395892 RBM19Q9Y4C8 960 aaKnown RBP16.96■□□□□ 0.31
CLIC1-209ENST00000395892 CCT4P50991 539 aaKnown RBP16.95■□□□□ 0.3
CLIC1-209ENST00000395892 DDX54Q8TDD1 881 aaKnown RBP16.95■□□□□ 0.3
CLIC1-209ENST00000395892 PDZRN3Q9UPQ7 1066 aa16.95■□□□□ 0.3
CLIC1-209ENST00000395892 SLIT2O94813 1529 aa16.95■□□□□ 0.3
CLIC1-209ENST00000395892 NUTM2BA6NNL0 878 aaPredicted RBP16.94■□□□□ 0.3
CLIC1-209ENST00000395892 NUTM2EB1AL46 878 aaPredicted RBP16.94■□□□□ 0.3
CLIC1-209ENST00000395892 FKBP5Q13451 457 aaPredicted RBP16.94■□□□□ 0.3
CLIC1-209ENST00000395892 PROSER3Q2NL68 480 aa16.94■□□□□ 0.3
CLIC1-209ENST00000395892 NUTM2AQ8IVF1 878 aaPredicted RBP16.94■□□□□ 0.3
CLIC1-209ENST00000395892 C1orf115Q9H7X2 142 aa16.94■□□□□ 0.3
CLIC1-209ENST00000395892 DBF4Q9UBU7 674 aaPredicted RBP16.94■□□□□ 0.3
CLIC1-209ENST00000395892 C5P01031 1676 aa16.94■□□□□ 0.3
CLIC1-209ENST00000395892 SPATA31A1Q5TZJ5 1347 aa16.94■□□□□ 0.3
CLIC1-209ENST00000395892 GLI3P10071 1580 aa16.94■□□□□ 0.3
CLIC1-209ENST00000395892 ANXA1P04083 346 aa16.93■□□□□ 0.3
CLIC1-209ENST00000395892 MEIS3Q99687 375 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms