RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 GGA1Q9UJY5 639 aa4.69□□□□□ -1.66
RNU6-239P-201ENST00000390990 GNB5O14775 395 aa4.68□□□□□ -1.66
RNU6-239P-201ENST00000390990 AMPD1P23109 780 aa4.68□□□□□ -1.66
RNU6-239P-201ENST00000390990 PHKA2P46019 1235 aa4.68□□□□□ -1.66
RNU6-239P-201ENST00000390990 FOXD4L6Q3SYB3 417 aaPredicted RBP4.68□□□□□ -1.66
RNU6-239P-201ENST00000390990 FOXD4L3Q6VB84 417 aaPredicted RBP4.68□□□□□ -1.66
RNU6-239P-201ENST00000390990 PHF24Q9UPV7 400 aa4.68□□□□□ -1.66
RNU6-239P-201ENST00000390990 TRAK2O60296 914 aa4.67□□□□□ -1.66
RNU6-239P-201ENST00000390990 USP17L8P0C7I0 530 aa4.67□□□□□ -1.66
RNU6-239P-201ENST00000390990 EPXP11678 715 aa4.67□□□□□ -1.66
RNU6-239P-201ENST00000390990 BMP4P12644 408 aa4.67□□□□□ -1.66
RNU6-239P-201ENST00000390990 CTBSQ01459 385 aa4.67□□□□□ -1.66
RNU6-239P-201ENST00000390990 SLCO4C1Q6ZQN7 724 aa4.67□□□□□ -1.66
RNU6-239P-201ENST00000390990 PNMA1Q8ND90 353 aa4.67□□□□□ -1.66
RNU6-239P-201ENST00000390990 TRIM52Q96A61 297 aa4.67□□□□□ -1.66
RNU6-239P-201ENST00000390990 OSBPL3Q9H4L5 887 aa4.67□□□□□ -1.66
RNU6-239P-201ENST00000390990 SLC24A3Q9HC58 644 aa4.67□□□□□ -1.66
RNU6-239P-201ENST00000390990 RAB6BQ9NRW1 208 aa4.67□□□□□ -1.66
RNU6-239P-201ENST00000390990 PCDHB9Q9Y5E1 797 aa4.67□□□□□ -1.66
RNU6-239P-201ENST00000390990 DGKGP49619 791 aa4.66□□□□□ -1.66
RNU6-239P-201ENST00000390990 CENPCQ03188 943 aa4.66□□□□□ -1.66
RNU6-239P-201ENST00000390990 CYP2U1Q7Z449 544 aa4.66□□□□□ -1.66
RNU6-239P-201ENST00000390990 ABHD17AQ96GS6 310 aa4.66□□□□□ -1.66
RNU6-239P-201ENST00000390990 TRIM34Q9BYJ4 488 aa4.66□□□□□ -1.66
RNU6-239P-201ENST00000390990 RUBCNLQ9H714 662 aa4.66□□□□□ -1.66
RNU6-239P-201ENST00000390990 NDFIP2Q9NV92 336 aa4.66□□□□□ -1.66
RNU6-239P-201ENST00000390990 A0A1B0GTH6 734 aa4.65□□□□□ -1.67
RNU6-239P-201ENST00000390990 BNIP3LO60238 219 aa4.65□□□□□ -1.67
RNU6-239P-201ENST00000390990 IL2RAP01589 272 aa4.65□□□□□ -1.67
RNU6-239P-201ENST00000390990 FGFR3P22607 806 aa4.65□□□□□ -1.67
RNU6-239P-201ENST00000390990 SH3D19Q5HYK7 790 aa4.65□□□□□ -1.67
RNU6-239P-201ENST00000390990 CNKSR1Q969H4 720 aa4.65□□□□□ -1.67
RNU6-239P-201ENST00000390990 KRTAP9-9Q9BYP9 154 aa4.65□□□□□ -1.67
RNU6-239P-201ENST00000390990 KRTAP9-4Q9BYQ2 154 aa4.65□□□□□ -1.67
RNU6-239P-201ENST00000390990 ATXN7L1Q9ULK2 861 aaPredicted RBP4.65□□□□□ -1.67
RNU6-239P-201ENST00000390990 NEURL1BA8MQ27 555 aa4.64□□□□□ -1.67
RNU6-239P-201ENST00000390990 ZBBXA8MT70 800 aa4.64□□□□□ -1.67
RNU6-239P-201ENST00000390990 PIK3R2O00459 728 aa4.64□□□□□ -1.67
RNU6-239P-201ENST00000390990 FBXO45P0C2W1 286 aa4.64□□□□□ -1.67
RNU6-239P-201ENST00000390990 MSX1P28360 303 aa4.64□□□□□ -1.67
RNU6-239P-201ENST00000390990 RNF135Q8IUD6 432 aa4.64□□□□□ -1.67
RNU6-239P-201ENST00000390990 ESYT1Q9BSJ8 1104 aa4.64□□□□□ -1.67
RNU6-239P-201ENST00000390990 NOP53Q9NZM5 478 aaKnown RBP4.64□□□□□ -1.67
RNU6-239P-201ENST00000390990 ATP1B4Q9UN42 357 aaPredicted RBP4.64□□□□□ -1.67
RNU6-239P-201ENST00000390990 PCDHB11Q9Y5F2 797 aa4.64□□□□□ -1.67
RNU6-239P-201ENST00000390990 HRH3Q9Y5N1 445 aa4.64□□□□□ -1.67
RNU6-239P-201ENST00000390990 SCO2A0A1W2PP80 73 aa4.63□□□□□ -1.67
RNU6-239P-201ENST00000390990 CSB-PGBD3P0DP91 1061 aa4.63□□□□□ -1.67
RNU6-239P-201ENST00000390990 GATA4P43694 442 aa4.63□□□□□ -1.67
RNU6-239P-201ENST00000390990 LBRQ14739 615 aaKnown RBP4.63□□□□□ -1.67
RNU6-239P-201ENST00000390990 RSPO4Q2I0M5 234 aaPredicted RBP4.63□□□□□ -1.67
RNU6-239P-201ENST00000390990 C4orf17Q53FE4 359 aa4.63□□□□□ -1.67
RNU6-239P-201ENST00000390990 CHSY3Q70JA7 882 aa4.63□□□□□ -1.67
RNU6-239P-201ENST00000390990 CCDC125Q86Z20 511 aa4.63□□□□□ -1.67
RNU6-239P-201ENST00000390990 PGBD3Q8N328 593 aa4.63□□□□□ -1.67
RNU6-239P-201ENST00000390990 ZSCAN10Q96SZ4 725 aaPredicted RBP4.63□□□□□ -1.67
RNU6-239P-201ENST00000390990 KLF15Q9UIH9 416 aa4.63□□□□□ -1.67
RNU6-239P-201ENST00000390990 HCN2Q9UL51 889 aa4.63□□□□□ -1.67
RNU6-239P-201ENST00000390990 GNRH1P01148 92 aa4.62□□□□□ -1.67
RNU6-239P-201ENST00000390990 ARAFP10398 606 aa4.62□□□□□ -1.67
RNU6-239P-201ENST00000390990 EFHC2Q5JST6 749 aa4.62□□□□□ -1.67
RNU6-239P-201ENST00000390990 NKAPLQ5M9Q1 402 aa4.62□□□□□ -1.67
RNU6-239P-201ENST00000390990 RNF20Q5VTR2 975 aa4.62□□□□□ -1.67
RNU6-239P-201ENST00000390990 TRIM11Q96F44 468 aa4.62□□□□□ -1.67
RNU6-239P-201ENST00000390990 FHDC1Q9C0D6 1143 aaPredicted RBP4.62□□□□□ -1.67
RNU6-239P-201ENST00000390990 ARTNQ5T4W7 220 aa4.61□□□□□ -1.67
RNU6-239P-201ENST00000390990 XAGE2Q96GT9 111 aa4.61□□□□□ -1.67
RNU6-239P-201ENST00000390990 PLVAPQ9BX97 442 aa4.61□□□□□ -1.67
RNU6-239P-201ENST00000390990 FAM117AQ9C073 453 aa4.61□□□□□ -1.67
RNU6-239P-201ENST00000390990 DNAAF2Q9NVR5 837 aaKnown RBP4.61□□□□□ -1.67
RNU6-239P-201ENST00000390990 RFC5P40937 340 aa4.6□□□□□ -1.67
RNU6-239P-201ENST00000390990 GNASQ5JWF2 1037 aa4.6□□□□□ -1.67
RNU6-239P-201ENST00000390990 TMEM214Q6NUQ4 689 aaKnown RBP4.6□□□□□ -1.67
RNU6-239P-201ENST00000390990 FCHSD1Q86WN1 690 aa4.6□□□□□ -1.67
RNU6-239P-201ENST00000390990 KRTAP19-1Q8IUB9 90 aa4.6□□□□□ -1.67
RNU6-239P-201ENST00000390990 ZCCHC2Q9C0B9 1178 aaKnown RBP4.6□□□□□ -1.67
RNU6-239P-201ENST00000390990 ZFP64Q9NPA5 681 aa4.6□□□□□ -1.67
RNU6-239P-201ENST00000390990 TPSG1Q9NRR2 321 aa4.6□□□□□ -1.67
RNU6-239P-201ENST00000390990 STAU1O95793 577 aaKnown RBP4.59□□□□□ -1.67
RNU6-239P-201ENST00000390990 GJD4Q96KN9 370 aaPredicted RBP4.59□□□□□ -1.67
RNU6-239P-201ENST00000390990 CDCA7Q9BWT1 371 aaPredicted RBP4.59□□□□□ -1.67
RNU6-239P-201ENST00000390990 CRISPLD1Q9H336 500 aa4.59□□□□□ -1.67
RNU6-239P-201ENST00000390990 ESF1Q9H501 851 aaKnown RBP4.59□□□□□ -1.67
RNU6-239P-201ENST00000390990 DYRK3O43781 588 aa4.58□□□□□ -1.68
RNU6-239P-201ENST00000390990 SPATA31C1P0DKV0 1188 aa4.58□□□□□ -1.68
RNU6-239P-201ENST00000390990 ADH6P28332 368 aa4.58□□□□□ -1.68
RNU6-239P-201ENST00000390990 GPBP1L1Q9HC44 474 aaPredicted RBP4.58□□□□□ -1.68
RNU6-239P-201ENST00000390990 PCDHGC4Q9Y5F7 938 aa4.58□□□□□ -1.68
RNU6-239P-201ENST00000390990 KRTAP4-8A0A0G2JLE6 195 aa4.57□□□□□ -1.68
RNU6-239P-201ENST00000390990 CD33P20138 364 aa4.57□□□□□ -1.68
RNU6-239P-201ENST00000390990 GTF2E1P29083 439 aaPredicted RBP4.57□□□□□ -1.68
RNU6-239P-201ENST00000390990 PRSS36Q5K4E3 855 aa4.57□□□□□ -1.68
RNU6-239P-201ENST00000390990 FIGNL1Q6PIW4 674 aa4.57□□□□□ -1.68
RNU6-239P-201ENST00000390990 PPARGC1BQ86YN6 1023 aaKnown RBP4.57□□□□□ -1.68
RNU6-239P-201ENST00000390990 CCDC85AQ96PX6 553 aaPredicted RBP4.57□□□□□ -1.68
RNU6-239P-201ENST00000390990 DCDC2BA2VCK2 349 aa4.56□□□□□ -1.68
RNU6-239P-201ENST00000390990 ATXN7O15265 892 aaPredicted RBP4.56□□□□□ -1.68
RNU6-239P-201ENST00000390990 MAPTP10636 758 aaKnown RBP4.56□□□□□ -1.68
RNU6-239P-201ENST00000390990 ATP4AP20648 1035 aa4.56□□□□□ -1.68
RNU6-239P-201ENST00000390990 PCBP4P57723 403 aaKnown RBP4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms