RNA–Protein interactions for RNA: ENST00000390353.2

TRBV6-1-201, Transcript of T cell receptor beta variable 6-1, humanhuman

APPRIS P1 BASIC

Gene TRBV6-1, Length 401 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1-201ENST00000390353 COL24A1Q17RW2 1714 aa11.34□□□□□ -0.59
TRBV6-1-201ENST00000390353 PKD1L3Q7Z443 1732 aa11.34□□□□□ -0.59
TRBV6-1-201ENST00000390353 RGPD2P0DJD1 1756 aa11.33□□□□□ -0.59
TRBV6-1-201ENST00000390353 ANKRD26Q9UPS8 1709 aa11.33□□□□□ -0.6
TRBV6-1-201ENST00000390353 MTHFSP49914 203 aa11.33□□□□□ -0.6
TRBV6-1-201ENST00000390353 RC3H1Q5TC82 1133 aaKnown RBP11.33□□□□□ -0.6
TRBV6-1-201ENST00000390353 ZNF530Q6P9A1 599 aaPredicted RBP11.33□□□□□ -0.6
TRBV6-1-201ENST00000390353 ATG3Q9NT62 314 aa11.33□□□□□ -0.6
TRBV6-1-201ENST00000390353 C4BP0C0L5 1744 aa11.32□□□□□ -0.6
TRBV6-1-201ENST00000390353 ITPK1Q13572 414 aa11.32□□□□□ -0.6
TRBV6-1-201ENST00000390353 RBM42Q9BTD8 480 aaKnown RBP11.32□□□□□ -0.6
TRBV6-1-201ENST00000390353 GPBP1L1Q9HC44 474 aaPredicted RBP11.32□□□□□ -0.6
TRBV6-1-201ENST00000390353 MMP10P09238 476 aa11.31□□□□□ -0.6
TRBV6-1-201ENST00000390353 RFC4P35249 363 aa11.31□□□□□ -0.6
TRBV6-1-201ENST00000390353 CNTNAP4Q9C0A0 1308 aa11.31□□□□□ -0.6
TRBV6-1-201ENST00000390353 TGFB2P61812 414 aa11.3□□□□□ -0.6
TRBV6-1-201ENST00000390353 CCDC87Q9NVE4 849 aa11.3□□□□□ -0.6
TRBV6-1-201ENST00000390353 CHD4Q14839 1912 aa11.3□□□□□ -0.6
TRBV6-1-201ENST00000390353 KDRP35968 1356 aa11.29□□□□□ -0.6
TRBV6-1-201ENST00000390353 ATP10DQ9P241 1426 aa11.29□□□□□ -0.6
TRBV6-1-201ENST00000390353 RPS6KA4O75676 772 aa11.29□□□□□ -0.6
TRBV6-1-201ENST00000390353 SULT6B1Q6IMI4 303 aa11.29□□□□□ -0.6
TRBV6-1-201ENST00000390353 AMIGO3Q86WK7 504 aa11.29□□□□□ -0.6
TRBV6-1-201ENST00000390353 PARP3Q9Y6F1 533 aa11.29□□□□□ -0.6
TRBV6-1-201ENST00000390353 GOLGB1Q14789 3259 aaKnown RBP11.29□□□□□ -0.6
TRBV6-1-201ENST00000390353 TUBGCP6Q96RT7 1819 aa11.28□□□□□ -0.6
TRBV6-1-201ENST00000390353 TOGARAM1Q9Y4F4 1720 aa11.28□□□□□ -0.6
TRBV6-1-201ENST00000390353 PTCD1O75127 700 aaKnown RBP11.27□□□□□ -0.61
TRBV6-1-201ENST00000390353 AKAP4Q5JQC9 854 aa11.27□□□□□ -0.61
TRBV6-1-201ENST00000390353 NFATC2IPQ8NCF5 419 aa11.27□□□□□ -0.61
TRBV6-1-201ENST00000390353 ARHGEF1Q92888 912 aaKnown RBP11.27□□□□□ -0.61
TRBV6-1-201ENST00000390353 IL13P35225 146 aa11.26□□□□□ -0.61
TRBV6-1-201ENST00000390353 AEBP1Q8IUX7 1158 aa11.26□□□□□ -0.61
TRBV6-1-201ENST00000390353 ADCY9O60503 1353 aa11.26□□□□□ -0.61
TRBV6-1-201ENST00000390353 KDM6AO15550 1401 aaPredicted RBP11.26□□□□□ -0.61
TRBV6-1-201ENST00000390353 GYS1P13807 737 aa11.25□□□□□ -0.61
TRBV6-1-201ENST00000390353 CRKLP46109 303 aaKnown RBP11.25□□□□□ -0.61
TRBV6-1-201ENST00000390353 AMER1Q5JTC6 1135 aaPredicted RBP11.25□□□□□ -0.61
TRBV6-1-201ENST00000390353 SMIM5Q71RC9 77 aa11.25□□□□□ -0.61
TRBV6-1-201ENST00000390353 TAF1LQ8IZX4 1826 aa11.25□□□□□ -0.61
TRBV6-1-201ENST00000390353 MAP2P11137 1827 aaKnown RBP11.24□□□□□ -0.61
TRBV6-1-201ENST00000390353 ITGB4P16144 1822 aa11.24□□□□□ -0.61
TRBV6-1-201ENST00000390353 ZPR1O75312 459 aa11.24□□□□□ -0.61
TRBV6-1-201ENST00000390353 SLC4A9Q96Q91 983 aa11.24□□□□□ -0.61
TRBV6-1-201ENST00000390353 SLC52A2Q9HAB3 445 aa11.24□□□□□ -0.61
TRBV6-1-201ENST00000390353 BCS1LQ9Y276 419 aa11.24□□□□□ -0.61
TRBV6-1-201ENST00000390353 C10orf71Q711Q0 1435 aa11.24□□□□□ -0.61
TRBV6-1-201ENST00000390353 UBR3Q6ZT12 1888 aa11.23□□□□□ -0.61
TRBV6-1-201ENST00000390353 DIAPH1O60610 1272 aaKnown RBP11.23□□□□□ -0.61
TRBV6-1-201ENST00000390353 PIM2Q9P1W9 311 aa11.23□□□□□ -0.61
TRBV6-1-201ENST00000390353 KIF7Q2M1P5 1343 aa11.23□□□□□ -0.61
TRBV6-1-201ENST00000390353 PXDNLA1KZ92 1463 aa11.23□□□□□ -0.61
TRBV6-1-201ENST00000390353 ZNF831Q5JPB2 1677 aa11.23□□□□□ -0.61
TRBV6-1-201ENST00000390353 A0A0G2JLW4 131 aa11.22□□□□□ -0.61
TRBV6-1-201ENST00000390353 FCHSD2O94868 740 aa11.22□□□□□ -0.61
TRBV6-1-201ENST00000390353 ARHGAP27Q6ZUM4 889 aa11.22□□□□□ -0.61
TRBV6-1-201ENST00000390353 VSIG10Q8N0Z9 540 aa11.22□□□□□ -0.61
TRBV6-1-201ENST00000390353 ZNF526Q8TF50 670 aaPredicted RBP11.22□□□□□ -0.61
TRBV6-1-201ENST00000390353 USP42Q9H9J4 1324 aaKnown RBP11.22□□□□□ -0.61
TRBV6-1-201ENST00000390353 WWC3Q9ULE0 1092 aa11.22□□□□□ -0.61
TRBV6-1-201ENST00000390353 CICQ96RK0 1608 aaPredicted RBP11.21□□□□□ -0.61
TRBV6-1-201ENST00000390353 DPEP1P16444 411 aa11.21□□□□□ -0.61
TRBV6-1-201ENST00000390353 DALRD3Q5D0E6 543 aaKnown RBP11.21□□□□□ -0.61
TRBV6-1-201ENST00000390353 TTC5Q8N0Z6 440 aa11.21□□□□□ -0.61
TRBV6-1-201ENST00000390353 NPC1L1Q9UHC9 1359 aa11.2□□□□□ -0.62
TRBV6-1-201ENST00000390353 RNMTO43148 476 aaKnown RBP11.2□□□□□ -0.62
TRBV6-1-201ENST00000390353 STARD3NLO95772 234 aa11.2□□□□□ -0.62
TRBV6-1-201ENST00000390353 HMOX1P09601 288 aa11.2□□□□□ -0.62
TRBV6-1-201ENST00000390353 HSPA6P17066 643 aa11.2□□□□□ -0.62
TRBV6-1-201ENST00000390353 CC2D1BQ5T0F9 858 aaKnown RBP11.2□□□□□ -0.62
TRBV6-1-201ENST00000390353 NPM2Q86SE8 214 aaKnown RBP11.2□□□□□ -0.62
TRBV6-1-201ENST00000390353 A0A087WZG4 1122 aa11.19□□□□□ -0.62
TRBV6-1-201ENST00000390353 TEFQ10587 303 aa11.19□□□□□ -0.62
TRBV6-1-201ENST00000390353 FKBP8Q14318 412 aa11.19□□□□□ -0.62
TRBV6-1-201ENST00000390353 INTS5Q6P9B9 1019 aaKnown RBP11.19□□□□□ -0.62
TRBV6-1-201ENST00000390353 GAS2L2Q8NHY3 880 aa11.19□□□□□ -0.62
TRBV6-1-201ENST00000390353 CFAP53Q96M91 514 aa11.19□□□□□ -0.62
TRBV6-1-201ENST00000390353 TEX13AQ9BXU3 409 aaPredicted RBP11.19□□□□□ -0.62
TRBV6-1-201ENST00000390353 PER1O15534 1290 aaPredicted RBP11.18□□□□□ -0.62
TRBV6-1-201ENST00000390353 TOMM70O94826 608 aa11.18□□□□□ -0.62
TRBV6-1-201ENST00000390353 MTHFSDQ2M296 383 aaKnown RBP11.18□□□□□ -0.62
TRBV6-1-201ENST00000390353 DNAJC10Q8IXB1 793 aa11.18□□□□□ -0.62
TRBV6-1-201ENST00000390353 C16orf71Q8IYS4 520 aaPredicted RBP11.18□□□□□ -0.62
TRBV6-1-201ENST00000390353 SRP68Q9UHB9 627 aaKnown RBP11.18□□□□□ -0.62
TRBV6-1-201ENST00000390353 NARFQ9UHQ1 456 aa11.18□□□□□ -0.62
TRBV6-1-201ENST00000390353 SOS1Q07889 1333 aaPredicted RBP11.17□□□□□ -0.62
TRBV6-1-201ENST00000390353 KDM2BQ8NHM5 1336 aa11.17□□□□□ -0.62
TRBV6-1-201ENST00000390353 GNAT3A8MTJ3 354 aa11.17□□□□□ -0.62
TRBV6-1-201ENST00000390353 U2SURPO15042 1029 aaKnown RBP11.17□□□□□ -0.62
TRBV6-1-201ENST00000390353 CYP19A1P11511 503 aaPredicted RBP11.17□□□□□ -0.62
TRBV6-1-201ENST00000390353 APLP1P51693 650 aa11.17□□□□□ -0.62
TRBV6-1-201ENST00000390353 LGR6Q9HBX8 967 aa11.17□□□□□ -0.62
TRBV6-1-201ENST00000390353 COL15A1P39059 1388 aa11.16□□□□□ -0.62
TRBV6-1-201ENST00000390353 C4AP0C0L4 1744 aa11.16□□□□□ -0.62
TRBV6-1-201ENST00000390353 POLRMTO00411 1230 aaKnown RBP11.16□□□□□ -0.62
TRBV6-1-201ENST00000390353 TM4SF1P30408 202 aa11.16□□□□□ -0.62
TRBV6-1-201ENST00000390353 DDR1Q08345 913 aa11.16□□□□□ -0.62
TRBV6-1-201ENST00000390353 C9orf131Q5VYM1 1079 aa11.16□□□□□ -0.62
TRBV6-1-201ENST00000390353 USPL1Q5W0Q7 1092 aa11.16□□□□□ -0.62
TRBV6-1-201ENST00000390353 PDZRN3Q9UPQ7 1066 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms