RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 CFHR5Q9BXR6 569 aa9.66□□□□□ -0.86
PMS1-202ENST00000374826 HRH3Q9Y5N1 445 aa9.66□□□□□ -0.86
PMS1-202ENST00000374826 CCDC85AQ96PX6 553 aaPredicted RBP9.65□□□□□ -0.86
PMS1-202ENST00000374826 APBB1O00213 710 aa9.64□□□□□ -0.87
PMS1-202ENST00000374826 OIP5O43482 229 aa9.64□□□□□ -0.87
PMS1-202ENST00000374826 MYCP01106 439 aaPredicted RBP9.64□□□□□ -0.87
PMS1-202ENST00000374826 THBS1P07996 1170 aa9.64□□□□□ -0.87
PMS1-202ENST00000374826 PHKA2P46019 1235 aa9.64□□□□□ -0.87
PMS1-202ENST00000374826 PODNQ7Z5L7 613 aa9.64□□□□□ -0.87
PMS1-202ENST00000374826 ZSCAN10Q96SZ4 725 aaPredicted RBP9.64□□□□□ -0.87
PMS1-202ENST00000374826 PLA2G4EQ3MJ16 856 aa9.63□□□□□ -0.87
PMS1-202ENST00000374826 GPAMQ9HCL2 828 aa9.63□□□□□ -0.87
PMS1-202ENST00000374826 MAP2K3P46734 347 aa9.62□□□□□ -0.87
PMS1-202ENST00000374826 OXCT2Q9BYC2 517 aaPredicted RBP9.62□□□□□ -0.87
PMS1-202ENST00000374826 A0A1B0GTH6 734 aa9.61□□□□□ -0.87
PMS1-202ENST00000374826 MSTNO14793 375 aa9.61□□□□□ -0.87
PMS1-202ENST00000374826 ITGB2P05107 769 aa9.61□□□□□ -0.87
PMS1-202ENST00000374826 TSGA10IPQ3SY00 556 aa9.61□□□□□ -0.87
PMS1-202ENST00000374826 FHDC1Q9C0D6 1143 aaPredicted RBP9.61□□□□□ -0.87
PMS1-202ENST00000374826 GNASQ5JWF2 1037 aa9.6□□□□□ -0.87
PMS1-202ENST00000374826 TMEM214Q6NUQ4 689 aaKnown RBP9.6□□□□□ -0.87
PMS1-202ENST00000374826 PHTF2Q8N3S3 785 aa9.6□□□□□ -0.87
PMS1-202ENST00000374826 KLRG1Q96E93 195 aa9.6□□□□□ -0.87
PMS1-202ENST00000374826 PHF24Q9UPV7 400 aa9.6□□□□□ -0.87
PMS1-202ENST00000374826 GTF2E1P29083 439 aaPredicted RBP9.59□□□□□ -0.87
PMS1-202ENST00000374826 USP4Q13107 963 aa9.59□□□□□ -0.87
PMS1-202ENST00000374826 UBAP2LQ14157 1087 aaKnown RBP9.59□□□□□ -0.87
PMS1-202ENST00000374826 C4orf17Q53FE4 359 aa9.59□□□□□ -0.87
PMS1-202ENST00000374826 ESCO1Q5FWF5 840 aa9.59□□□□□ -0.87
PMS1-202ENST00000374826 SNRPNP63162 240 aaKnown RBP9.58□□□□□ -0.88
PMS1-202ENST00000374826 LBRQ14739 615 aaKnown RBP9.58□□□□□ -0.88
PMS1-202ENST00000374826 GALNT6Q8NCL4 622 aa9.58□□□□□ -0.88
PMS1-202ENST00000374826 SPOCK3Q9BQ16 436 aa9.58□□□□□ -0.88
PMS1-202ENST00000374826 CSB-PGBD3P0DP91 1061 aa9.57□□□□□ -0.88
PMS1-202ENST00000374826 MSX1P28360 303 aa9.57□□□□□ -0.88
PMS1-202ENST00000374826 C1orf229Q6ZS94 237 aaPredicted RBP9.57□□□□□ -0.88
PMS1-202ENST00000374826 PGBD3Q8N328 593 aa9.57□□□□□ -0.88
PMS1-202ENST00000374826 SHISA8B8ZZ34 492 aa9.56□□□□□ -0.88
PMS1-202ENST00000374826 EIF4G2P78344 907 aaKnown RBP eCLIP9.56□□□□□ -0.88
PMS1-202ENST00000374826 PPARGC1BQ86YN6 1023 aaKnown RBP9.56□□□□□ -0.88
PMS1-202ENST00000374826 RUBCNLQ9H714 662 aa9.56□□□□□ -0.88
PMS1-202ENST00000374826 TBC1D2BQ9UPU7 963 aa9.56□□□□□ -0.88
PMS1-202ENST00000374826 EDARADDQ8WWZ3 215 aa9.55□□□□□ -0.88
PMS1-202ENST00000374826 ETNK1Q9HBU6 452 aa9.55□□□□□ -0.88
PMS1-202ENST00000374826 GDF2Q9UK05 429 aaPredicted RBP9.55□□□□□ -0.88
PMS1-202ENST00000374826 STAU1O95793 577 aaKnown RBP9.54□□□□□ -0.88
PMS1-202ENST00000374826 SLFNL1Q499Z3 407 aa9.54□□□□□ -0.88
PMS1-202ENST00000374826 EFHC2Q5JST6 749 aa9.54□□□□□ -0.88
PMS1-202ENST00000374826 RHBDD1Q8TEB9 315 aa9.54□□□□□ -0.88
PMS1-202ENST00000374826 PRM3Q9NNZ6 103 aa9.54□□□□□ -0.88
PMS1-202ENST00000374826 CHIC2Q9UKJ5 165 aa9.54□□□□□ -0.88
PMS1-202ENST00000374826 ATXN7L1Q9ULK2 861 aaPredicted RBP9.54□□□□□ -0.88
PMS1-202ENST00000374826 DOLKQ9UPQ8 538 aa9.54□□□□□ -0.88
PMS1-202ENST00000374826 C2CD2LO14523 706 aa9.53□□□□□ -0.88
PMS1-202ENST00000374826 ADAM23O75077 832 aa9.53□□□□□ -0.88
PMS1-202ENST00000374826 PROCP04070 461 aa9.53□□□□□ -0.88
PMS1-202ENST00000374826 IRF5Q13568 498 aa9.53□□□□□ -0.88
PMS1-202ENST00000374826 NDFIP2Q9NV92 336 aa9.53□□□□□ -0.88
PMS1-202ENST00000374826 MKL2Q9ULH7 1088 aa9.53□□□□□ -0.88
PMS1-202ENST00000374826 BNIP3LO60238 219 aa9.52□□□□□ -0.89
PMS1-202ENST00000374826 RNF135Q8IUD6 432 aa9.52□□□□□ -0.89
PMS1-202ENST00000374826 GOLGA6L1Q8N7Z2 621 aa9.52□□□□□ -0.89
PMS1-202ENST00000374826 SIRT1Q96EB6 747 aa9.52□□□□□ -0.89
PMS1-202ENST00000374826 CRISPLD1Q9H336 500 aa9.52□□□□□ -0.89
PMS1-202ENST00000374826 KRBA1A5PL33 1030 aa9.51□□□□□ -0.89
PMS1-202ENST00000374826 BMP4P12644 408 aa9.51□□□□□ -0.89
PMS1-202ENST00000374826 CTBSQ01459 385 aa9.51□□□□□ -0.89
PMS1-202ENST00000374826 TLR1Q15399 786 aa9.51□□□□□ -0.89
PMS1-202ENST00000374826 ABHD17AQ96GS6 310 aa9.51□□□□□ -0.89
PMS1-202ENST00000374826 RRAGCQ9HB90 399 aa9.51□□□□□ -0.89
PMS1-202ENST00000374826 FGFR3P22607 806 aa9.5□□□□□ -0.89
PMS1-202ENST00000374826 OXLD1Q5BKU9 147 aa9.5□□□□□ -0.89
PMS1-202ENST00000374826 LINC00114Q6XXX2 140 aa9.49□□□□□ -0.89
PMS1-202ENST00000374826 ALYREFQ86V81 257 aaKnown RBP9.49□□□□□ -0.89
PMS1-202ENST00000374826 GGA1Q9UJY5 639 aa9.49□□□□□ -0.89
PMS1-202ENST00000374826 INHAP05111 366 aa9.48□□□□□ -0.89
PMS1-202ENST00000374826 HOXB4P17483 251 aaPredicted RBP9.48□□□□□ -0.89
PMS1-202ENST00000374826 COL8A1P27658 744 aa9.48□□□□□ -0.89
PMS1-202ENST00000374826 SCNN1DP51172 638 aa9.48□□□□□ -0.89
PMS1-202ENST00000374826 ZCCHC2Q9C0B9 1178 aaKnown RBP9.48□□□□□ -0.89
PMS1-202ENST00000374826 GDF10P55107 478 aa9.47□□□□□ -0.89
PMS1-202ENST00000374826 VAC14Q08AM6 782 aa9.47□□□□□ -0.89
PMS1-202ENST00000374826 TBC1D9Q6ZT07 1266 aa9.47□□□□□ -0.89
PMS1-202ENST00000374826 BTBD6Q96KE9 485 aa9.47□□□□□ -0.89
PMS1-202ENST00000374826 PCDHGC4Q9Y5F7 938 aa9.47□□□□□ -0.89
PMS1-202ENST00000374826 PLA2G4AP47712 749 aa9.46□□□□□ -0.9
PMS1-202ENST00000374826 MAP7D1Q3KQU3 841 aa9.46□□□□□ -0.9
PMS1-202ENST00000374826 FIGNL1Q6PIW4 674 aa9.46□□□□□ -0.9
PMS1-202ENST00000374826 SLCO4C1Q6ZQN7 724 aa9.46□□□□□ -0.9
PMS1-202ENST00000374826 C1orf216Q8TAB5 229 aa9.46□□□□□ -0.9
PMS1-202ENST00000374826 NIFKQ9BYG3 293 aaKnown RBP9.46□□□□□ -0.9
PMS1-202ENST00000374826 DNAAF2Q9NVR5 837 aaKnown RBP9.46□□□□□ -0.9
PMS1-202ENST00000374826 AMPD1P23109 780 aa9.45□□□□□ -0.9
PMS1-202ENST00000374826 SMTNP53814 917 aa9.45□□□□□ -0.9
PMS1-202ENST00000374826 NLRP8Q86W28 1048 aa9.45□□□□□ -0.9
PMS1-202ENST00000374826 AIDAQ96BJ3 306 aa9.45□□□□□ -0.9
PMS1-202ENST00000374826 ARAFP10398 606 aa9.44□□□□□ -0.9
PMS1-202ENST00000374826 EPXP11678 715 aa9.44□□□□□ -0.9
PMS1-202ENST00000374826 GDPD2Q9HCC8 539 aa9.44□□□□□ -0.9
PMS1-202ENST00000374826 ATP4AP20648 1035 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms