RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 TEFQ10587 303 aa20.13■□□□□ 0.81
NIPAL3-204ENST00000374399 NUTM2AQ8IVF1 878 aaPredicted RBP20.13■□□□□ 0.81
NIPAL3-204ENST00000374399 ZCRB1Q8TBF4 217 aaKnown RBP20.13■□□□□ 0.81
NIPAL3-204ENST00000374399 CLUAP1Q96AJ1 413 aa20.13■□□□□ 0.81
NIPAL3-204ENST00000374399 EIF4A1P60842 406 aaKnown RBP20.13■□□□□ 0.81
NIPAL3-204ENST00000374399 CCDC136Q96JN2 1154 aa20.12■□□□□ 0.81
NIPAL3-204ENST00000374399 USP35Q9P2H5 1018 aa20.12■□□□□ 0.81
NIPAL3-204ENST00000374399 BTBD11A6QL63 1104 aa20.11■□□□□ 0.81
NIPAL3-204ENST00000374399 DZIP1LQ8IYY4 767 aaKnown RBP20.11■□□□□ 0.81
NIPAL3-204ENST00000374399 DCAF5Q96JK2 942 aa20.11■□□□□ 0.81
NIPAL3-204ENST00000374399 PCDH11XQ9BZA7 1347 aa20.11■□□□□ 0.81
NIPAL3-204ENST00000374399 PCDH11YQ9BZA8 1340 aa20.11■□□□□ 0.81
NIPAL3-204ENST00000374399 SLC52A2Q9HAB3 445 aa20.1■□□□□ 0.81
NIPAL3-204ENST00000374399 HEG1Q9ULI3 1381 aa20.1■□□□□ 0.81
NIPAL3-204ENST00000374399 NKX1-1Q15270 411 aaPredicted RBP20.1■□□□□ 0.81
NIPAL3-204ENST00000374399 ARHGAP45Q92619 1136 aa20.1■□□□□ 0.81
NIPAL3-204ENST00000374399 LRP6O75581 1613 aa20.09■□□□□ 0.81
NIPAL3-204ENST00000374399 RGS12O14924 1447 aa20.09■□□□□ 0.81
NIPAL3-204ENST00000374399 SOS1Q07889 1333 aaPredicted RBP20.09■□□□□ 0.81
NIPAL3-204ENST00000374399 TOGARAM1Q9Y4F4 1720 aa20.08■□□□□ 0.81
NIPAL3-204ENST00000374399 IPO8O15397 1037 aaKnown RBP20.08■□□□□ 0.81
NIPAL3-204ENST00000374399 MVPQ14764 893 aaKnown RBP20.07■□□□□ 0.8
NIPAL3-204ENST00000374399 NFATC2IPQ8NCF5 419 aa20.07■□□□□ 0.8
NIPAL3-204ENST00000374399 CACNA1FO60840 1977 aa20.07■□□□□ 0.8
NIPAL3-204ENST00000374399 SPATA31A1Q5TZJ5 1347 aa20.07■□□□□ 0.8
NIPAL3-204ENST00000374399 HSP90AB1P08238 724 aaKnown RBP20.07■□□□□ 0.8
NIPAL3-204ENST00000374399 HSPA1LP34931 641 aa20.07■□□□□ 0.8
NIPAL3-204ENST00000374399 TMEM57Q8N5G2 664 aa20.06■□□□□ 0.8
NIPAL3-204ENST00000374399 ABCC4O15439 1325 aa20.06■□□□□ 0.8
NIPAL3-204ENST00000374399 MS4A1P11836 297 aa20.05■□□□□ 0.8
NIPAL3-204ENST00000374399 FTSJ3Q8IY81 847 aaKnown RBP20.05■□□□□ 0.8
NIPAL3-204ENST00000374399 GLI3P10071 1580 aa20.05■□□□□ 0.8
NIPAL3-204ENST00000374399 BCL9LQ86UU0 1499 aa20.05■□□□□ 0.8
NIPAL3-204ENST00000374399 SLC4A2P04920 1241 aa20.05■□□□□ 0.8
NIPAL3-204ENST00000374399 G2E3Q7L622 706 aa20.05■□□□□ 0.8
NIPAL3-204ENST00000374399 HOXB7P09629 217 aa20.04■□□□□ 0.8
NIPAL3-204ENST00000374399 SLC39A6Q13433 755 aa20.04■□□□□ 0.8
NIPAL3-204ENST00000374399 DDX54Q8TDD1 881 aaKnown RBP20.04■□□□□ 0.8
NIPAL3-204ENST00000374399 SPATA31A5Q5VU36 1347 aa20.04■□□□□ 0.8
NIPAL3-204ENST00000374399 SPATA31A6Q5VVP1 1343 aa20.04■□□□□ 0.8
NIPAL3-204ENST00000374399 SPATA31A7Q8IWB4 1347 aa20.04■□□□□ 0.8
NIPAL3-204ENST00000374399 C5P01031 1676 aa20.04■□□□□ 0.8
NIPAL3-204ENST00000374399 ZNF790Q6PG37 636 aa20.03■□□□□ 0.8
NIPAL3-204ENST00000374399 KDM2BQ8NHM5 1336 aa20.03■□□□□ 0.8
NIPAL3-204ENST00000374399 PAPPAQ13219 1627 aa20.03■□□□□ 0.8
NIPAL3-204ENST00000374399 GIGYF1O75420 1035 aaPredicted RBP20.02■□□□□ 0.8
NIPAL3-204ENST00000374399 PRAMEF22A3QJZ6 481 aa20.02■□□□□ 0.79
NIPAL3-204ENST00000374399 CCDC30Q5VVM6 783 aa20.02■□□□□ 0.79
NIPAL3-204ENST00000374399 NECTIN2Q92692 538 aa20.02■□□□□ 0.79
NIPAL3-204ENST00000374399 ERVV-2B6SEH9 535 aa20.01■□□□□ 0.79
NIPAL3-204ENST00000374399 API5Q9BZZ5 524 aaKnown RBP20.01■□□□□ 0.79
NIPAL3-204ENST00000374399 UBR2Q8IWV8 1755 aa20.01■□□□□ 0.79
NIPAL3-204ENST00000374399 CABP4P57796 275 aa20■□□□□ 0.79
NIPAL3-204ENST00000374399 HDGFL1Q5TGJ6 251 aa20■□□□□ 0.79
NIPAL3-204ENST00000374399 UNC5CLQ8IV45 518 aa20■□□□□ 0.79
NIPAL3-204ENST00000374399 FNBP4Q8N3X1 1017 aaPredicted RBP20■□□□□ 0.79
NIPAL3-204ENST00000374399 THRAP3Q9Y2W1 955 aaKnown RBP20■□□□□ 0.79
NIPAL3-204ENST00000374399 PTPRCP08575 1304 aa20■□□□□ 0.79
NIPAL3-204ENST00000374399 TNS2Q63HR2 1409 aa20■□□□□ 0.79
NIPAL3-204ENST00000374399 ITGB4P16144 1822 aa19.99■□□□□ 0.79
NIPAL3-204ENST00000374399 ITPRIPQ8IWB1 547 aa19.99■□□□□ 0.79
NIPAL3-204ENST00000374399 C8orf37Q96NL8 207 aa19.99■□□□□ 0.79
NIPAL3-204ENST00000374399 PCDHB15Q9Y5E8 787 aa19.99■□□□□ 0.79
NIPAL3-204ENST00000374399 AAMPQ13685 434 aa19.99■□□□□ 0.79
NIPAL3-204ENST00000374399 DDX19BQ9UMR2 479 aa19.99■□□□□ 0.79
NIPAL3-204ENST00000374399 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.98■□□□□ 0.79
NIPAL3-204ENST00000374399 ZNF496Q96IT1 587 aaPredicted RBP19.98■□□□□ 0.79
NIPAL3-204ENST00000374399 ZBTB40Q9NUA8 1239 aa19.98■□□□□ 0.79
NIPAL3-204ENST00000374399 EIF2S2P20042 333 aaKnown RBP19.97■□□□□ 0.79
NIPAL3-204ENST00000374399 BARGINQ6ZT62 677 aa19.97■□□□□ 0.79
NIPAL3-204ENST00000374399 NGLY1Q96IV0 654 aa19.97■□□□□ 0.79
NIPAL3-204ENST00000374399 STK31Q9BXU1 1019 aa19.97■□□□□ 0.79
NIPAL3-204ENST00000374399 ZBTB7BO15156 539 aaPredicted RBP19.96■□□□□ 0.79
NIPAL3-204ENST00000374399 IGHDP01880 384 aa19.96■□□□□ 0.79
NIPAL3-204ENST00000374399 INTS3Q68E01 1043 aaKnown RBP19.96■□□□□ 0.79
NIPAL3-204ENST00000374399 CDCA7Q9BWT1 371 aaPredicted RBP19.96■□□□□ 0.79
NIPAL3-204ENST00000374399 KCPQ6ZWJ8 1503 aa19.96■□□□□ 0.79
NIPAL3-204ENST00000374399 EXOC5O00471 708 aa19.96■□□□□ 0.79
NIPAL3-204ENST00000374399 FLIIQ13045 1269 aa19.96■□□□□ 0.79
NIPAL3-204ENST00000374399 VPS72Q15906 364 aa19.96■□□□□ 0.79
NIPAL3-204ENST00000374399 CHPF2Q9P2E5 772 aa19.96■□□□□ 0.79
NIPAL3-204ENST00000374399 PHAXQ9H814 394 aaKnown RBP19.95■□□□□ 0.78
NIPAL3-204ENST00000374399 N4BP2Q86UW6 1770 aaPredicted RBP19.95■□□□□ 0.78
NIPAL3-204ENST00000374399 PROSER3Q2NL68 480 aa19.93■□□□□ 0.78
NIPAL3-204ENST00000374399 LAMB4A4D0S4 1761 aa19.93■□□□□ 0.78
NIPAL3-204ENST00000374399 F6X3S4 739 aa19.93■□□□□ 0.78
NIPAL3-204ENST00000374399 ANXA1P04083 346 aa19.93■□□□□ 0.78
NIPAL3-204ENST00000374399 PDIA6Q15084 440 aa19.93■□□□□ 0.78
NIPAL3-204ENST00000374399 DOT1LQ8TEK3 1739 aa19.91■□□□□ 0.78
NIPAL3-204ENST00000374399 CENPQQ7L2Z9 268 aaPredicted RBP19.91■□□□□ 0.78
NIPAL3-204ENST00000374399 TTC5Q8N0Z6 440 aa19.91■□□□□ 0.78
NIPAL3-204ENST00000374399 FMNL2Q96PY5 1086 aa19.91■□□□□ 0.78
NIPAL3-204ENST00000374399 DDB1Q16531 1140 aa19.9■□□□□ 0.78
NIPAL3-204ENST00000374399 PIGBQ92521 554 aa19.9■□□□□ 0.78
NIPAL3-204ENST00000374399 DBF4Q9UBU7 674 aaPredicted RBP19.9■□□□□ 0.78
NIPAL3-204ENST00000374399 CCDC9Q9Y3X0 531 aaKnown RBP19.9■□□□□ 0.78
NIPAL3-204ENST00000374399 USP16Q9Y5T5 823 aa19.9■□□□□ 0.78
NIPAL3-204ENST00000374399 SNRPA1P09661 255 aaKnown RBP19.9■□□□□ 0.78
NIPAL3-204ENST00000374399 FKBP5Q13451 457 aaPredicted RBP19.9■□□□□ 0.78
NIPAL3-204ENST00000374399 MARCH10Q8NA82 808 aaPredicted RBP19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms