RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 ZNF500O60304 480 aaPredicted RBP6.64□□□□□ -1.35
ATG4A-204ENST00000372246 DSG2Q14126 1118 aa6.64□□□□□ -1.35
ATG4A-204ENST00000372246 MRPL50Q8N5N7 158 aaKnown RBP6.64□□□□□ -1.35
ATG4A-204ENST00000372246 MBIPQ9NS73 344 aa6.64□□□□□ -1.35
ATG4A-204ENST00000372246 ERCC6L2Q5T890 1561 aa6.63□□□□□ -1.35
ATG4A-204ENST00000372246 FAM205CA6NFA0 338 aa6.63□□□□□ -1.35
ATG4A-204ENST00000372246 MAP4K4O95819 1239 aaPredicted RBP6.63□□□□□ -1.35
ATG4A-204ENST00000372246 NAA30Q147X3 362 aaPredicted RBP6.63□□□□□ -1.35
ATG4A-204ENST00000372246 ARSIQ5FYB1 569 aa6.63□□□□□ -1.35
ATG4A-204ENST00000372246 LRSAM1Q6UWE0 723 aa6.63□□□□□ -1.35
ATG4A-204ENST00000372246 DDX54Q8TDD1 881 aaKnown RBP6.63□□□□□ -1.35
ATG4A-204ENST00000372246 ZNF428Q96B54 188 aa6.63□□□□□ -1.35
ATG4A-204ENST00000372246 HS3ST6Q96QI5 342 aa6.63□□□□□ -1.35
ATG4A-204ENST00000372246 IL25Q9H293 177 aa6.63□□□□□ -1.35
ATG4A-204ENST00000372246 ISY1Q9ULR0 285 aaKnown RBP6.63□□□□□ -1.35
ATG4A-204ENST00000372246 CHMP3Q9Y3E7 222 aa6.63□□□□□ -1.35
ATG4A-204ENST00000372246 EMILIN1Q9Y6C2 1016 aa6.63□□□□□ -1.35
ATG4A-204ENST00000372246 A0A1W2PP64 1363 aa6.63□□□□□ -1.35
ATG4A-204ENST00000372246 AP5Z1O43299 807 aa6.62□□□□□ -1.35
ATG4A-204ENST00000372246 ZSCAN20P17040 1043 aaPredicted RBP6.62□□□□□ -1.35
ATG4A-204ENST00000372246 PPP4R3BQ5MIZ7 849 aa6.62□□□□□ -1.35
ATG4A-204ENST00000372246 TTC22Q5TAA0 569 aa6.62□□□□□ -1.35
ATG4A-204ENST00000372246 EFCAB2Q5VUJ9 269 aa6.62□□□□□ -1.35
ATG4A-204ENST00000372246 SPC24Q8NBT2 197 aa6.62□□□□□ -1.35
ATG4A-204ENST00000372246 KHSRPQ92945 711 aaKnown RBP eCLIP6.62□□□□□ -1.35
ATG4A-204ENST00000372246 DUOX2Q9NRD8 1548 aa6.62□□□□□ -1.35
ATG4A-204ENST00000372246 F6X3S4 739 aa6.62□□□□□ -1.35
ATG4A-204ENST00000372246 IPO8O15397 1037 aaKnown RBP6.62□□□□□ -1.35
ATG4A-204ENST00000372246 HCLS1P14317 486 aaPredicted RBP6.62□□□□□ -1.35
ATG4A-204ENST00000372246 NGEFQ8N5V2 710 aa6.62□□□□□ -1.35
ATG4A-204ENST00000372246 TMX3Q96JJ7 454 aa6.62□□□□□ -1.35
ATG4A-204ENST00000372246 MEIS3Q99687 375 aa6.62□□□□□ -1.35
ATG4A-204ENST00000372246 ZMYM3Q14202 1370 aa6.62□□□□□ -1.35
ATG4A-204ENST00000372246 DIAPH1O60610 1272 aaKnown RBP6.61□□□□□ -1.35
ATG4A-204ENST00000372246 CPA1P15085 419 aa6.61□□□□□ -1.35
ATG4A-204ENST00000372246 U2AF2P26368 475 aaKnown RBP eCLIP6.61□□□□□ -1.352e-7■□□□□ 9.2
ATG4A-204ENST00000372246 SASS6Q6UVJ0 657 aa6.61□□□□□ -1.35
ATG4A-204ENST00000372246 CADPS2Q86UW7 1296 aa6.61□□□□□ -1.35
ATG4A-204ENST00000372246 PLPP6Q8IY26 295 aa6.61□□□□□ -1.35
ATG4A-204ENST00000372246 NECTIN2Q92692 538 aa6.61□□□□□ -1.35
ATG4A-204ENST00000372246 EXOC6BQ9Y2D4 811 aa6.61□□□□□ -1.35
ATG4A-204ENST00000372246 SPHKAPQ2M3C7 1700 aa6.61□□□□□ -1.35
ATG4A-204ENST00000372246 RRS1Q15050 365 aaKnown RBP6.61□□□□□ -1.35
ATG4A-204ENST00000372246 RABEP1Q15276 862 aa6.61□□□□□ -1.35
ATG4A-204ENST00000372246 TWISTNBQ3B726 338 aaPredicted RBP6.61□□□□□ -1.35
ATG4A-204ENST00000372246 SLC4A10Q6U841 1118 aa6.61□□□□□ -1.35
ATG4A-204ENST00000372246 KANK1Q14678 1352 aa6.61□□□□□ -1.35
ATG4A-204ENST00000372246 NUCB2P80303 420 aa6.6□□□□□ -1.35
ATG4A-204ENST00000372246 CLEC17AQ6ZS10 378 aa6.6□□□□□ -1.35
ATG4A-204ENST00000372246 UNC5CLQ8IV45 518 aa6.6□□□□□ -1.35
ATG4A-204ENST00000372246 GCC1Q96CN9 775 aa6.6□□□□□ -1.35
ATG4A-204ENST00000372246 PYCARDQ9ULZ3 195 aa6.6□□□□□ -1.35
ATG4A-204ENST00000372246 CNPY2Q9Y2B0 182 aa6.6□□□□□ -1.35
ATG4A-204ENST00000372246 TRPM2O94759 1503 aa6.6□□□□□ -1.35
ATG4A-204ENST00000372246 CFAP74Q9C0B2 1584 aa6.6□□□□□ -1.35
ATG4A-204ENST00000372246 VGLL3A8MV65 326 aa6.6□□□□□ -1.35
ATG4A-204ENST00000372246 ADCY5O95622 1261 aa6.6□□□□□ -1.35
ATG4A-204ENST00000372246 USP48Q86UV5 1035 aa6.6□□□□□ -1.35
ATG4A-204ENST00000372246 CABP1Q9NZU7 370 aa6.6□□□□□ -1.35
ATG4A-204ENST00000372246 DYNC1I1O14576 645 aa6.59□□□□□ -1.35
ATG4A-204ENST00000372246 KIAA2012Q0VF49 1180 aa6.59□□□□□ -1.35
ATG4A-204ENST00000372246 COL9A3Q14050 684 aaPredicted RBP6.59□□□□□ -1.35
ATG4A-204ENST00000372246 GIMAP6Q6P9H5 292 aa6.59□□□□□ -1.35
ATG4A-204ENST00000372246 MCM10Q7L590 875 aa6.59□□□□□ -1.35
ATG4A-204ENST00000372246 RILPL2Q969X0 211 aa6.59□□□□□ -1.35
ATG4A-204ENST00000372246 CCDC94Q9BW85 323 aaPredicted RBP6.59□□□□□ -1.35
ATG4A-204ENST00000372246 TSPY26PQ9H489 355 aa6.59□□□□□ -1.35
ATG4A-204ENST00000372246 C14orf93Q9H972 538 aaKnown RBP6.59□□□□□ -1.35
ATG4A-204ENST00000372246 BCL2L12Q9HB09 334 aa6.59□□□□□ -1.35
ATG4A-204ENST00000372246 CCDC39Q9UFE4 941 aa6.59□□□□□ -1.35
ATG4A-204ENST00000372246 PCDHGA4Q9Y5G9 962 aa6.59□□□□□ -1.35
ATG4A-204ENST00000372246 KDM4FA0A1W2PPD8 638 aa6.59□□□□□ -1.35
ATG4A-204ENST00000372246 NOLC1Q14978 699 aaKnown RBP eCLIP6.59□□□□□ -1.35
ATG4A-204ENST00000372246 AEBP1Q8IUX7 1158 aa6.59□□□□□ -1.35
ATG4A-204ENST00000372246 DHX37Q8IY37 1157 aaKnown RBP6.59□□□□□ -1.35
ATG4A-204ENST00000372246 PTCD2Q8WV60 388 aaKnown RBP6.59□□□□□ -1.35
ATG4A-204ENST00000372246 PRAM1Q96QH2 718 aa6.59□□□□□ -1.35
ATG4A-204ENST00000372246 INTS3Q68E01 1043 aaKnown RBP6.58□□□□□ -1.36
ATG4A-204ENST00000372246 G2E3Q7L622 706 aa6.58□□□□□ -1.36
ATG4A-204ENST00000372246 ZBTB9Q96C00 473 aa6.58□□□□□ -1.36
ATG4A-204ENST00000372246 KRTAP3-3Q9BYR6 98 aa6.58□□□□□ -1.36
ATG4A-204ENST00000372246 KRTAP3-2Q9BYR7 98 aa6.58□□□□□ -1.36
ATG4A-204ENST00000372246 ANO2Q9NQ90 1003 aa6.58□□□□□ -1.36
ATG4A-204ENST00000372246 POLKQ9UBT6 870 aa6.58□□□□□ -1.36
ATG4A-204ENST00000372246 MROH2AA6NES4 1674 aa6.58□□□□□ -1.36
ATG4A-204ENST00000372246 ABCC11Q96J66 1382 aa6.58□□□□□ -1.36
ATG4A-204ENST00000372246 FIBPO43427 364 aa6.58□□□□□ -1.36
ATG4A-204ENST00000372246 DMTNQ08495 405 aa6.58□□□□□ -1.36
ATG4A-204ENST00000372246 CEP85Q6P2H3 762 aa6.58□□□□□ -1.36
ATG4A-204ENST00000372246 FAM173BQ6P4H8 233 aa6.58□□□□□ -1.36
ATG4A-204ENST00000372246 WAPLQ7Z5K2 1190 aa6.58□□□□□ -1.36
ATG4A-204ENST00000372246 SMAP1Q8IYB5 467 aaPredicted RBP6.58□□□□□ -1.36
ATG4A-204ENST00000372246 MYRIPQ8NFW9 859 aa6.58□□□□□ -1.36
ATG4A-204ENST00000372246 KCNF1Q9H3M0 494 aa6.58□□□□□ -1.36
ATG4A-204ENST00000372246 DCTPP1Q9H773 170 aa6.58□□□□□ -1.36
ATG4A-204ENST00000372246 ERBB3P21860 1342 aa6.58□□□□□ -1.36
ATG4A-204ENST00000372246 EVC2Q86UK5 1308 aa6.58□□□□□ -1.36
ATG4A-204ENST00000372246 IBTKQ9P2D0 1353 aaPredicted RBP6.58□□□□□ -1.36
ATG4A-204ENST00000372246 SHROOM2Q13796 1616 aa6.58□□□□□ -1.36
ATG4A-204ENST00000372246 MAP3K4Q9Y6R4 1608 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 141.8 ms