RNA–Protein interactions for RNA: ENST00000370025.8

PRPF38B-203, Transcript of pre-mRNA processing factor 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38B, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-203ENST00000370025 AKAP4Q5JQC9 854 aa12.49□□□□□ -0.41
PRPF38B-203ENST00000370025 ABCC4O15439 1325 aa12.49□□□□□ -0.41
PRPF38B-203ENST00000370025 C1orf141Q5JVX7 400 aa12.48□□□□□ -0.41
PRPF38B-203ENST00000370025 ERBB3P21860 1342 aa12.48□□□□□ -0.41
PRPF38B-203ENST00000370025 L1TD1Q5T7N2 865 aaKnown RBP12.48□□□□□ -0.41
PRPF38B-203ENST00000370025 CABLES1Q8TDN4 633 aa12.48□□□□□ -0.41
PRPF38B-203ENST00000370025 HDAC1Q13547 482 aaPredicted RBP12.48□□□□□ -0.41
PRPF38B-203ENST00000370025 PTPRCP08575 1304 aa12.48□□□□□ -0.41
PRPF38B-203ENST00000370025 SOS1Q07889 1333 aaPredicted RBP12.48□□□□□ -0.41
PRPF38B-203ENST00000370025 NCAPD2Q15021 1401 aa12.48□□□□□ -0.41
PRPF38B-203ENST00000370025 RGPD5Q99666 1765 aa12.47□□□□□ -0.41
PRPF38B-203ENST00000370025 SEC24BO95487 1268 aa12.47□□□□□ -0.41
PRPF38B-203ENST00000370025 RRP9O43818 475 aaKnown RBP12.47□□□□□ -0.41
PRPF38B-203ENST00000370025 SLC4A2P04920 1241 aa12.47□□□□□ -0.41
PRPF38B-203ENST00000370025 STK31Q9BXU1 1019 aa12.47□□□□□ -0.41
PRPF38B-203ENST00000370025 NLRP2Q9NX02 1062 aa12.47□□□□□ -0.41
PRPF38B-203ENST00000370025 ZBTB7BO15156 539 aaPredicted RBP12.47□□□□□ -0.41
PRPF38B-203ENST00000370025 CEMIPQ8WUJ3 1361 aa12.46□□□□□ -0.41
PRPF38B-203ENST00000370025 CSB-PGBD3P0DP91 1061 aa12.46□□□□□ -0.41
PRPF38B-203ENST00000370025 RBM10P98175 930 aaKnown RBP12.46□□□□□ -0.41
PRPF38B-203ENST00000370025 TEFQ10587 303 aa12.46□□□□□ -0.41
PRPF38B-203ENST00000370025 CCDC30Q5VVM6 783 aa12.46□□□□□ -0.42
PRPF38B-203ENST00000370025 RAPGEF4Q8WZA2 1011 aa12.46□□□□□ -0.42
PRPF38B-203ENST00000370025 LGR6Q9HBX8 967 aa12.45□□□□□ -0.42
PRPF38B-203ENST00000370025 PDZRN3Q9UPQ7 1066 aa12.45□□□□□ -0.42
PRPF38B-203ENST00000370025 CAMTA1Q9Y6Y1 1673 aa12.45□□□□□ -0.42
PRPF38B-203ENST00000370025 SOS2Q07890 1332 aaPredicted RBP12.44□□□□□ -0.42
PRPF38B-203ENST00000370025 CHRNA2Q15822 529 aa12.44□□□□□ -0.42
PRPF38B-203ENST00000370025 INTS3Q68E01 1043 aaKnown RBP12.44□□□□□ -0.42
PRPF38B-203ENST00000370025 CHMP4AQ9BY43 222 aa12.44□□□□□ -0.42
PRPF38B-203ENST00000370025 LMO7Q8WWI1 1683 aa12.44□□□□□ -0.42
PRPF38B-203ENST00000370025 TATP17735 454 aaPredicted RBP12.44□□□□□ -0.42
PRPF38B-203ENST00000370025 MPRIPQ6WCQ1 1025 aa12.44□□□□□ -0.42
PRPF38B-203ENST00000370025 CPDO75976 1380 aa12.44□□□□□ -0.42
PRPF38B-203ENST00000370025 ABCC6O95255 1503 aa12.44□□□□□ -0.42
PRPF38B-203ENST00000370025 RNMTO43148 476 aaKnown RBP12.43□□□□□ -0.42
PRPF38B-203ENST00000370025 COL18A1P39060 1754 aa12.43□□□□□ -0.42
PRPF38B-203ENST00000370025 BTBD11A6QL63 1104 aa12.42□□□□□ -0.42
PRPF38B-203ENST00000370025 TRIM44Q96DX7 344 aaPredicted RBP12.42□□□□□ -0.42
PRPF38B-203ENST00000370025 SPG7Q9UQ90 795 aa12.42□□□□□ -0.42
PRPF38B-203ENST00000370025 SMC5Q8IY18 1101 aa12.42□□□□□ -0.42
PRPF38B-203ENST00000370025 OVOS2A0A0G2JMS6 1433 aa12.41□□□□□ -0.42
PRPF38B-203ENST00000370025 BECN1Q14457 450 aa12.41□□□□□ -0.42
PRPF38B-203ENST00000370025 PRDM11Q9NQV5 511 aa12.41□□□□□ -0.42
PRPF38B-203ENST00000370025 CACNA1FO60840 1977 aa12.41□□□□□ -0.42
PRPF38B-203ENST00000370025 CRYBG1Q9Y4K1 1723 aa12.41□□□□□ -0.42
PRPF38B-203ENST00000370025 FAM208AQ9UK61 1670 aaKnown RBP12.41□□□□□ -0.42
PRPF38B-203ENST00000370025 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.41□□□□□ -0.421e-6■■■□□ 16.4
PRPF38B-203ENST00000370025 HOXB7P09629 217 aa12.4□□□□□ -0.42
PRPF38B-203ENST00000370025 CLCN1P35523 988 aa12.4□□□□□ -0.42
PRPF38B-203ENST00000370025 EIF4A1P60842 406 aaKnown RBP12.4□□□□□ -0.42
PRPF38B-203ENST00000370025 HDGFL1Q5TGJ6 251 aa12.4□□□□□ -0.42
PRPF38B-203ENST00000370025 G2E3Q7L622 706 aa12.4□□□□□ -0.42
PRPF38B-203ENST00000370025 NECTIN2Q92692 538 aa12.4□□□□□ -0.42
PRPF38B-203ENST00000370025 C1orf115Q9H7X2 142 aa12.4□□□□□ -0.42
PRPF38B-203ENST00000370025 RGS12O14924 1447 aa12.4□□□□□ -0.42
PRPF38B-203ENST00000370025 CCT4P50991 539 aaKnown RBP12.4□□□□□ -0.43
PRPF38B-203ENST00000370025 FLIIQ13045 1269 aa12.39□□□□□ -0.43
PRPF38B-203ENST00000370025 SLC4A10Q6U841 1118 aa12.39□□□□□ -0.43
PRPF38B-203ENST00000370025 GCC1Q96CN9 775 aa12.39□□□□□ -0.43
PRPF38B-203ENST00000370025 FKBP5Q13451 457 aaPredicted RBP12.39□□□□□ -0.43
PRPF38B-203ENST00000370025 PLEKHG2Q9H7P9 1386 aa12.39□□□□□ -0.43
PRPF38B-203ENST00000370025 VIRMAQ69YN4 1812 aaKnown RBP12.38□□□□□ -0.43
PRPF38B-203ENST00000370025 KDM3BQ7LBC6 1761 aa12.38□□□□□ -0.43
PRPF38B-203ENST00000370025 ERBB4Q15303 1308 aa12.38□□□□□ -0.43
PRPF38B-203ENST00000370025 EIF2S2P20042 333 aaKnown RBP12.38□□□□□ -0.43
PRPF38B-203ENST00000370025 IFNL2Q8IZJ0 200 aa12.38□□□□□ -0.43
PRPF38B-203ENST00000370025 FAM13BQ9NYF5 915 aa12.38□□□□□ -0.43
PRPF38B-203ENST00000370025 ESPNB1AK53 854 aa12.38□□□□□ -0.43
PRPF38B-203ENST00000370025 F6X3S4 739 aa12.37□□□□□ -0.43
PRPF38B-203ENST00000370025 KCNQ3O43525 872 aa12.37□□□□□ -0.43
PRPF38B-203ENST00000370025 NUCB1Q02818 461 aa12.37□□□□□ -0.43
PRPF38B-203ENST00000370025 PHKG2P15735 406 aa12.36□□□□□ -0.43
PRPF38B-203ENST00000370025 RPAP2Q8IXW5 612 aaPredicted RBP12.36□□□□□ -0.43
PRPF38B-203ENST00000370025 TOM1L2Q6ZVM7 507 aa12.36□□□□□ -0.43
PRPF38B-203ENST00000370025 MEGF6O75095 1541 aa12.36□□□□□ -0.43
PRPF38B-203ENST00000370025 WDR17Q8IZU2 1322 aa12.36□□□□□ -0.43
PRPF38B-203ENST00000370025 HSP90AB1P08238 724 aaKnown RBP12.36□□□□□ -0.43
PRPF38B-203ENST00000370025 NHSL1Q5SYE7 1610 aa12.36□□□□□ -0.43
PRPF38B-203ENST00000370025 CHD1LQ86WJ1 897 aa12.35□□□□□ -0.43
PRPF38B-203ENST00000370025 TPRNQ4KMQ1 711 aa12.35□□□□□ -0.43
PRPF38B-203ENST00000370025 ANKRD45Q5TZF3 282 aa12.35□□□□□ -0.43
PRPF38B-203ENST00000370025 SIRT2Q8IXJ6 389 aa12.35□□□□□ -0.43
PRPF38B-203ENST00000370025 PRDM10Q9NQV6 1147 aa12.35□□□□□ -0.43
PRPF38B-203ENST00000370025 TRAK2O60296 914 aa12.35□□□□□ -0.43
PRPF38B-203ENST00000370025 ANKRD44Q8N8A2 993 aa12.35□□□□□ -0.43
PRPF38B-203ENST00000370025 MEIS3Q99687 375 aa12.35□□□□□ -0.43
PRPF38B-203ENST00000370025 EVA1CP58658 441 aa12.34□□□□□ -0.43
PRPF38B-203ENST00000370025 SLC52A2Q9HAB3 445 aa12.34□□□□□ -0.43
PRPF38B-203ENST00000370025 UPF2Q9HAU5 1272 aaKnown RBP12.34□□□□□ -0.43
PRPF38B-203ENST00000370025 KIAA1211Q6ZU35 1233 aa12.34□□□□□ -0.43
PRPF38B-203ENST00000370025 DCAF5Q96JK2 942 aa12.34□□□□□ -0.43
PRPF38B-203ENST00000370025 LNPKQ9C0E8 428 aa12.34□□□□□ -0.43
PRPF38B-203ENST00000370025 ADAMTS7Q9UKP4 1686 aa12.34□□□□□ -0.43
PRPF38B-203ENST00000370025 GIGYF1O75420 1035 aaPredicted RBP12.33□□□□□ -0.44
PRPF38B-203ENST00000370025 GNAI3P08754 354 aa12.33□□□□□ -0.44
PRPF38B-203ENST00000370025 FOXD4L1Q9NU39 408 aa12.33□□□□□ -0.44
PRPF38B-203ENST00000370025 CHPF2Q9P2E5 772 aa12.33□□□□□ -0.44
PRPF38B-203ENST00000370025 SCN11AQ9UI33 1791 aa12.33□□□□□ -0.44
PRPF38B-203ENST00000370025 PHAXQ9H814 394 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms