RNA–Protein interactions for RNA: ENST00000369406.7

HMGCS2-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS2, Length 2,428 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-201ENST00000369406 G2E3Q7L622 706 aa18.05■□□□□ 0.48
HMGCS2-201ENST00000369406 NECTIN2Q92692 538 aa18.05■□□□□ 0.48
HMGCS2-201ENST00000369406 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.05■□□□□ 0.48
HMGCS2-201ENST00000369406 SPG7Q9UQ90 795 aa18.05■□□□□ 0.48
HMGCS2-201ENST00000369406 MRC1P22897 1456 aa18.05■□□□□ 0.48
HMGCS2-201ENST00000369406 FTSJ3Q8IY81 847 aaKnown RBP18.04■□□□□ 0.48
HMGCS2-201ENST00000369406 EIF4A1P60842 406 aaKnown RBP18.04■□□□□ 0.48
HMGCS2-201ENST00000369406 TEFQ10587 303 aa18.04■□□□□ 0.48
HMGCS2-201ENST00000369406 NUTM2BA6NNL0 878 aaPredicted RBP18.03■□□□□ 0.48
HMGCS2-201ENST00000369406 BTBD11A6QL63 1104 aa18.03■□□□□ 0.48
HMGCS2-201ENST00000369406 NUTM2EB1AL46 878 aaPredicted RBP18.03■□□□□ 0.48
HMGCS2-201ENST00000369406 NUTM2AQ8IVF1 878 aaPredicted RBP18.03■□□□□ 0.48
HMGCS2-201ENST00000369406 BABAM1Q9NWV8 329 aa18.03■□□□□ 0.48
HMGCS2-201ENST00000369406 GLI3P10071 1580 aa18.03■□□□□ 0.48
HMGCS2-201ENST00000369406 PCDHB15Q9Y5E8 787 aa18.03■□□□□ 0.48
HMGCS2-201ENST00000369406 IFNL2Q8IZJ0 200 aa18.02■□□□□ 0.48
HMGCS2-201ENST00000369406 ABCC4O15439 1325 aa18.02■□□□□ 0.48
HMGCS2-201ENST00000369406 PLEKHG2Q9H7P9 1386 aa18.02■□□□□ 0.48
HMGCS2-201ENST00000369406 PRAMEF22A3QJZ6 481 aa18.02■□□□□ 0.47
HMGCS2-201ENST00000369406 IGHDP01880 384 aa18.02■□□□□ 0.47
HMGCS2-201ENST00000369406 ITPRIPQ8IWB1 547 aa18.02■□□□□ 0.47
HMGCS2-201ENST00000369406 IL2RBP14784 551 aa18.01■□□□□ 0.47
HMGCS2-201ENST00000369406 CERKQ8TCT0 537 aa18.01■□□□□ 0.47
HMGCS2-201ENST00000369406 DISP2A7MBM2 1401 aa18.01■□□□□ 0.47
HMGCS2-201ENST00000369406 SLC4A2P04920 1241 aa18.01■□□□□ 0.47
HMGCS2-201ENST00000369406 SLC39A6Q13433 755 aa18.01■□□□□ 0.47
HMGCS2-201ENST00000369406 IPO8O15397 1037 aaKnown RBP18■□□□□ 0.47
HMGCS2-201ENST00000369406 NFATC2IPQ8NCF5 419 aa18■□□□□ 0.47
HMGCS2-201ENST00000369406 ZCRB1Q8TBF4 217 aaKnown RBP18■□□□□ 0.47
HMGCS2-201ENST00000369406 ARHGAP45Q92619 1136 aa18■□□□□ 0.47
HMGCS2-201ENST00000369406 SLC52A2Q9HAB3 445 aa18■□□□□ 0.47
HMGCS2-201ENST00000369406 NWD2Q9ULI1 1742 aa18■□□□□ 0.47
HMGCS2-201ENST00000369406 HEG1Q9ULI3 1381 aa17.99■□□□□ 0.47
HMGCS2-201ENST00000369406 ITGB4P16144 1822 aa17.98■□□□□ 0.47
HMGCS2-201ENST00000369406 PAPPAQ13219 1627 aa17.98■□□□□ 0.47
HMGCS2-201ENST00000369406 N4BP2Q86UW6 1770 aaPredicted RBP17.98■□□□□ 0.47
HMGCS2-201ENST00000369406 DCAF5Q96JK2 942 aa17.98■□□□□ 0.47
HMGCS2-201ENST00000369406 PCDH11XQ9BZA7 1347 aa17.98■□□□□ 0.47
HMGCS2-201ENST00000369406 PCDH11YQ9BZA8 1340 aa17.98■□□□□ 0.47
HMGCS2-201ENST00000369406 LRP6O75581 1613 aa17.97■□□□□ 0.47
HMGCS2-201ENST00000369406 UBR2Q8IWV8 1755 aa17.97■□□□□ 0.47
HMGCS2-201ENST00000369406 TSHZ2Q9NRE2 1034 aa17.97■□□□□ 0.47
HMGCS2-201ENST00000369406 SLIT2O94813 1529 aa17.97■□□□□ 0.47
HMGCS2-201ENST00000369406 DDX54Q8TDD1 881 aaKnown RBP17.97■□□□□ 0.47
HMGCS2-201ENST00000369406 MS4A1P11836 297 aa17.96■□□□□ 0.46
HMGCS2-201ENST00000369406 ZBTB40Q9NUA8 1239 aa17.96■□□□□ 0.46
HMGCS2-201ENST00000369406 KAT6BQ8WYB5 2073 aa17.95■□□□□ 0.46
HMGCS2-201ENST00000369406 F6X3S4 739 aa17.95■□□□□ 0.46
HMGCS2-201ENST00000369406 ANXA1P04083 346 aa17.95■□□□□ 0.46
HMGCS2-201ENST00000369406 EIF2S2P20042 333 aaKnown RBP17.95■□□□□ 0.46
HMGCS2-201ENST00000369406 HDGFL1Q5TGJ6 251 aa17.95■□□□□ 0.46
HMGCS2-201ENST00000369406 DDX19BQ9UMR2 479 aa17.95■□□□□ 0.46
HMGCS2-201ENST00000369406 GIGYF1O75420 1035 aaPredicted RBP17.94■□□□□ 0.46
HMGCS2-201ENST00000369406 ZNF790Q6PG37 636 aa17.94■□□□□ 0.46
HMGCS2-201ENST00000369406 API5Q9BZZ5 524 aaKnown RBP17.94■□□□□ 0.46
HMGCS2-201ENST00000369406 PHAXQ9H814 394 aaKnown RBP17.94■□□□□ 0.46
HMGCS2-201ENST00000369406 ZBTB7BO15156 539 aaPredicted RBP17.93■□□□□ 0.46
HMGCS2-201ENST00000369406 NKX1-1Q15270 411 aaPredicted RBP17.93■□□□□ 0.46
HMGCS2-201ENST00000369406 CCDC30Q5VVM6 783 aa17.93■□□□□ 0.46
HMGCS2-201ENST00000369406 C1orf115Q9H7X2 142 aa17.93■□□□□ 0.46
HMGCS2-201ENST00000369406 CHPF2Q9P2E5 772 aa17.93■□□□□ 0.46
HMGCS2-201ENST00000369406 PROSER3Q2NL68 480 aa17.93■□□□□ 0.46
HMGCS2-201ENST00000369406 CENPQQ7L2Z9 268 aaPredicted RBP17.93■□□□□ 0.46
HMGCS2-201ENST00000369406 JCADQ9P266 1359 aa17.93■□□□□ 0.46
HMGCS2-201ENST00000369406 LAMB4A4D0S4 1761 aa17.92■□□□□ 0.46
HMGCS2-201ENST00000369406 PTPRCP08575 1304 aa17.92■□□□□ 0.46
HMGCS2-201ENST00000369406 SPATA31A1Q5TZJ5 1347 aa17.92■□□□□ 0.46
HMGCS2-201ENST00000369406 FLIIQ13045 1269 aa17.92■□□□□ 0.46
HMGCS2-201ENST00000369406 ZNF496Q96IT1 587 aaPredicted RBP17.92■□□□□ 0.46
HMGCS2-201ENST00000369406 SOS1Q07889 1333 aaPredicted RBP17.92■□□□□ 0.46
HMGCS2-201ENST00000369406 STK31Q9BXU1 1019 aa17.91■□□□□ 0.46
HMGCS2-201ENST00000369406 KCPQ6ZWJ8 1503 aa17.91■□□□□ 0.46
HMGCS2-201ENST00000369406 HSP90AB1P08238 724 aaKnown RBP17.91■□□□□ 0.46
HMGCS2-201ENST00000369406 CABP4P57796 275 aa17.91■□□□□ 0.46
HMGCS2-201ENST00000369406 INTS3Q68E01 1043 aaKnown RBP17.91■□□□□ 0.46
HMGCS2-201ENST00000369406 DOT1LQ8TEK3 1739 aa17.91■□□□□ 0.46
HMGCS2-201ENST00000369406 HOXB7P09629 217 aa17.9■□□□□ 0.46
HMGCS2-201ENST00000369406 HSPA1LP34931 641 aa17.9■□□□□ 0.46
HMGCS2-201ENST00000369406 BCL9LQ86UU0 1499 aa17.9■□□□□ 0.46
HMGCS2-201ENST00000369406 SPATA31A5Q5VU36 1347 aa17.88■□□□□ 0.45
HMGCS2-201ENST00000369406 SPATA31A7Q8IWB4 1347 aa17.88■□□□□ 0.45
HMGCS2-201ENST00000369406 C8orf37Q96NL8 207 aa17.88■□□□□ 0.45
HMGCS2-201ENST00000369406 TNS2Q63HR2 1409 aa17.88■□□□□ 0.45
HMGCS2-201ENST00000369406 FKBP5Q13451 457 aaPredicted RBP17.88■□□□□ 0.45
HMGCS2-201ENST00000369406 AAMPQ13685 434 aa17.88■□□□□ 0.45
HMGCS2-201ENST00000369406 PDIA6Q15084 440 aa17.87■□□□□ 0.45
HMGCS2-201ENST00000369406 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.87■□□□□ 0.45
HMGCS2-201ENST00000369406 ERVV-2B6SEH9 535 aa17.87■□□□□ 0.45
HMGCS2-201ENST00000369406 SLC4A10Q6U841 1118 aa17.87■□□□□ 0.45
HMGCS2-201ENST00000369406 SIRT2Q8IXJ6 389 aa17.87■□□□□ 0.45
HMGCS2-201ENST00000369406 MEIS3Q99687 375 aa17.86■□□□□ 0.45
HMGCS2-201ENST00000369406 PIP4K2AP48426 406 aaPredicted RBP17.86■□□□□ 0.45
HMGCS2-201ENST00000369406 USP16Q9Y5T5 823 aa17.86■□□□□ 0.45
HMGCS2-201ENST00000369406 ADCY9O60503 1353 aa17.85■□□□□ 0.45
HMGCS2-201ENST00000369406 ATP10DQ9P241 1426 aa17.85■□□□□ 0.45
HMGCS2-201ENST00000369406 UNC5CLQ8IV45 518 aa17.83■□□□□ 0.44
HMGCS2-201ENST00000369406 TTC5Q8N0Z6 440 aa17.83■□□□□ 0.44
HMGCS2-201ENST00000369406 PIGBQ92521 554 aa17.83■□□□□ 0.44
HMGCS2-201ENST00000369406 NGLY1Q96IV0 654 aa17.83■□□□□ 0.44
HMGCS2-201ENST00000369406 PXDNLA1KZ92 1463 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms