RNA–Protein interactions for RNA: ENST00000368648.7

EBF3-202, Transcript of early B cell factor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene EBF3, Length 4,375 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-202ENST00000368648 ME1P48163 572 aa12.81□□□□□ -0.36
EBF3-202ENST00000368648 PTPN14Q15678 1187 aa12.81□□□□□ -0.36
EBF3-202ENST00000368648 CADPS2Q86UW7 1296 aa12.8□□□□□ -0.36
EBF3-202ENST00000368648 TCEANC2Q96MN5 208 aa12.8□□□□□ -0.36
EBF3-202ENST00000368648 RPRD2Q5VT52 1461 aaKnown RBP12.8□□□□□ -0.36
EBF3-202ENST00000368648 KDM6BO15054 1643 aa12.8□□□□□ -0.36
EBF3-202ENST00000368648 MYL6BP14649 208 aa12.8□□□□□ -0.36
EBF3-202ENST00000368648 CASTP20810 708 aaKnown RBP12.8□□□□□ -0.36
EBF3-202ENST00000368648 KCNH5Q8NCM2 988 aa12.8□□□□□ -0.36
EBF3-202ENST00000368648 SPATA32Q96LK8 384 aa12.8□□□□□ -0.36
EBF3-202ENST00000368648 SIL1Q9H173 461 aa12.8□□□□□ -0.36
EBF3-202ENST00000368648 ERBB4Q15303 1308 aa12.8□□□□□ -0.36
EBF3-202ENST00000368648 BMP2KLQ5H9B9 411 aa12.8□□□□□ -0.36
EBF3-202ENST00000368648 FSD1Q9BTV5 496 aa12.8□□□□□ -0.36
EBF3-202ENST00000368648 LETM1O95202 739 aaPredicted RBP12.79□□□□□ -0.36
EBF3-202ENST00000368648 PKP1Q13835 747 aa12.79□□□□□ -0.36
EBF3-202ENST00000368648 CCDC186Q7Z3E2 898 aa12.79□□□□□ -0.36
EBF3-202ENST00000368648 VPS37DQ86XT2 251 aa12.79□□□□□ -0.36
EBF3-202ENST00000368648 ZSWIM4Q9H7M6 989 aa12.79□□□□□ -0.36
EBF3-202ENST00000368648 SPG7Q9UQ90 795 aa12.79□□□□□ -0.36
EBF3-202ENST00000368648 ACEP12821 1306 aa12.79□□□□□ -0.36
EBF3-202ENST00000368648 TMX3Q96JJ7 454 aa12.79□□□□□ -0.36
EBF3-202ENST00000368648 CNPY2Q9Y2B0 182 aa12.79□□□□□ -0.36
EBF3-202ENST00000368648 G3BP1Q13283 466 aaKnown RBP eCLIP12.79□□□□□ -0.36
EBF3-202ENST00000368648 MAP3K11Q16584 847 aa12.79□□□□□ -0.36
EBF3-202ENST00000368648 MCM10Q7L590 875 aa12.79□□□□□ -0.36
EBF3-202ENST00000368648 UBXN4Q92575 508 aa12.79□□□□□ -0.36
EBF3-202ENST00000368648 CCDC94Q9BW85 323 aaPredicted RBP12.79□□□□□ -0.36
EBF3-202ENST00000368648 LRRCC1Q9C099 1032 aa12.79□□□□□ -0.36
EBF3-202ENST00000368648 NEUROD6Q96NK8 337 aa12.79□□□□□ -0.36
EBF3-202ENST00000368648 TTC37Q6PGP7 1564 aa12.78□□□□□ -0.36
EBF3-202ENST00000368648 H0YHG0 523 aa12.78□□□□□ -0.36
EBF3-202ENST00000368648 CCDC183Q5T5S1 534 aa12.78□□□□□ -0.36
EBF3-202ENST00000368648 GUCY1B3Q02153 619 aa12.78□□□□□ -0.36
EBF3-202ENST00000368648 RNF20Q5VTR2 975 aa12.78□□□□□ -0.36
EBF3-202ENST00000368648 CCDC30Q5VVM6 783 aa12.78□□□□□ -0.36
EBF3-202ENST00000368648 ISM2Q6H9L7 571 aa12.78□□□□□ -0.36
EBF3-202ENST00000368648 PER1O15534 1290 aaPredicted RBP12.78□□□□□ -0.36
EBF3-202ENST00000368648 URI1O94763 535 aaPredicted RBP12.78□□□□□ -0.36
EBF3-202ENST00000368648 USP48Q86UV5 1035 aa12.78□□□□□ -0.36
EBF3-202ENST00000368648 GNAI2P04899 355 aa12.77□□□□□ -0.36
EBF3-202ENST00000368648 SYNE3Q6ZMZ3 975 aa12.77□□□□□ -0.36
EBF3-202ENST00000368648 CLASRPQ8N2M8 674 aaKnown RBP12.77□□□□□ -0.36
EBF3-202ENST00000368648 CLIP2Q9UDT6 1046 aa12.77□□□□□ -0.36
EBF3-202ENST00000368648 SERPINC1P01008 464 aa12.77□□□□□ -0.37
EBF3-202ENST00000368648 KCNA6P17658 529 aa12.77□□□□□ -0.37
EBF3-202ENST00000368648 FAM193AP78312 1265 aa12.77□□□□□ -0.37
EBF3-202ENST00000368648 CNTROBQ8N137 903 aa12.77□□□□□ -0.37
EBF3-202ENST00000368648 JARID2Q92833 1246 aaPredicted RBP12.77□□□□□ -0.37
EBF3-202ENST00000368648 CYP46A1Q9Y6A2 500 aa12.77□□□□□ -0.37
EBF3-202ENST00000368648 FAM83GA6ND36 823 aa12.77□□□□□ -0.37
EBF3-202ENST00000368648 DUOX2Q9NRD8 1548 aa12.77□□□□□ -0.37
EBF3-202ENST00000368648 SDSP20132 328 aa12.76□□□□□ -0.37
EBF3-202ENST00000368648 DNAJC2Q99543 621 aaKnown RBP12.76□□□□□ -0.37
EBF3-202ENST00000368648 SF3B2Q13435 895 aaKnown RBP12.76□□□□□ -0.37
EBF3-202ENST00000368648 AXDND1Q5T1B0 1012 aaPredicted RBP12.76□□□□□ -0.37
EBF3-202ENST00000368648 IPO4Q8TEX9 1081 aaKnown RBP12.76□□□□□ -0.37
EBF3-202ENST00000368648 KAT6BQ8WYB5 2073 aa12.76□□□□□ -0.37
EBF3-202ENST00000368648 LEKR1Q6ZMV7 388 aa12.76□□□□□ -0.37
EBF3-202ENST00000368648 CABLES1Q8TDN4 633 aa12.76□□□□□ -0.37
EBF3-202ENST00000368648 PCMTD1Q96MG8 357 aaPredicted RBP12.76□□□□□ -0.37
EBF3-202ENST00000368648 BIN1O00499 593 aa12.76□□□□□ -0.37
EBF3-202ENST00000368648 SETQ01105 290 aaPredicted RBP12.76□□□□□ -0.37
EBF3-202ENST00000368648 NUCB1Q02818 461 aa12.76□□□□□ -0.37
EBF3-202ENST00000368648 PRPF40BQ6NWY9 871 aaKnown RBP12.76□□□□□ -0.37
EBF3-202ENST00000368648 SMC5Q8IY18 1101 aa12.76□□□□□ -0.37
EBF3-202ENST00000368648 GPATCH11Q8N954 259 aa12.75□□□□□ -0.37
EBF3-202ENST00000368648 NECAB1Q8N987 351 aa12.75□□□□□ -0.37
EBF3-202ENST00000368648 OTUD7AQ8TE49 926 aaPredicted RBP12.75□□□□□ -0.37
EBF3-202ENST00000368648 PDRG1Q9NUG6 133 aa12.75□□□□□ -0.37
EBF3-202ENST00000368648 NOL7Q9UMY1 257 aaKnown RBP12.75□□□□□ -0.37
EBF3-202ENST00000368648 ZFYVE16Q7Z3T8 1539 aa12.75□□□□□ -0.37
EBF3-202ENST00000368648 RIMS2Q9UQ26 1411 aa12.75□□□□□ -0.37
EBF3-202ENST00000368648 PTGS1P23219 599 aa12.75□□□□□ -0.37
EBF3-202ENST00000368648 NINLQ9Y2I6 1382 aa12.75□□□□□ -0.37
EBF3-202ENST00000368648 FCHSD2O94868 740 aa12.75□□□□□ -0.37
EBF3-202ENST00000368648 NOM1Q5C9Z4 860 aaKnown RBP12.74□□□□□ -0.37
EBF3-202ENST00000368648 SHROOM2Q13796 1616 aa12.74□□□□□ -0.37
EBF3-202ENST00000368648 BTBD11A6QL63 1104 aa12.74□□□□□ -0.37
EBF3-202ENST00000368648 SRGAP3O43295 1099 aa12.74□□□□□ -0.37
EBF3-202ENST00000368648 HSP90AA4PQ58FG1 418 aa12.74□□□□□ -0.37
EBF3-202ENST00000368648 MPRIPQ6WCQ1 1025 aa12.74□□□□□ -0.37
EBF3-202ENST00000368648 CCDC102AQ96A19 550 aa12.74□□□□□ -0.37
EBF3-202ENST00000368648 CWC15Q9P013 229 aaKnown RBP12.74□□□□□ -0.37
EBF3-202ENST00000368648 SCAF11Q99590 1463 aaKnown RBP12.74□□□□□ -0.37
EBF3-202ENST00000368648 PRIMPOLQ96LW4 560 aa12.74□□□□□ -0.37
EBF3-202ENST00000368648 NAT10Q9H0A0 1025 aaKnown RBP12.74□□□□□ -0.37
EBF3-202ENST00000368648 RAD21O60216 631 aa12.74□□□□□ -0.37
EBF3-202ENST00000368648 CLSTN1O94985 981 aa12.74□□□□□ -0.37
EBF3-202ENST00000368648 ZNF165P49910 485 aa12.74□□□□□ -0.37
EBF3-202ENST00000368648 STK38Q15208 465 aa12.74□□□□□ -0.37
EBF3-202ENST00000368648 TMCO3Q6UWJ1 677 aa12.74□□□□□ -0.37
EBF3-202ENST00000368648 ATP7AQ04656 1500 aa12.73□□□□□ -0.37
EBF3-202ENST00000368648 PDCP20941 246 aa12.73□□□□□ -0.37
EBF3-202ENST00000368648 MCM5P33992 734 aa12.73□□□□□ -0.37
EBF3-202ENST00000368648 TSR1Q2NL82 804 aaKnown RBP12.73□□□□□ -0.37
EBF3-202ENST00000368648 HSP90AB3PQ58FF7 597 aa12.73□□□□□ -0.37
EBF3-202ENST00000368648 KIF18AQ8NI77 898 aa12.73□□□□□ -0.37
EBF3-202ENST00000368648 ZRANB1Q9UGI0 708 aa12.73□□□□□ -0.37
EBF3-202ENST00000368648 ITSN2Q9NZM3 1697 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms