RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 EYA1Q99502 592 aa13.49□□□□□ -0.25
TPM3-210ENST00000368530 SPINK5Q9NQ38 1064 aaPredicted RBP13.49□□□□□ -0.25
TPM3-210ENST00000368530 TAF1LQ8IZX4 1826 aa13.49□□□□□ -0.25
TPM3-210ENST00000368530 PKD1L3Q7Z443 1732 aa13.49□□□□□ -0.25
TPM3-210ENST00000368530 KIF20BQ96Q89 1820 aa13.49□□□□□ -0.25
TPM3-210ENST00000368530 GIGYF1O75420 1035 aaPredicted RBP13.49□□□□□ -0.25
TPM3-210ENST00000368530 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.49□□□□□ -0.255e-7■■■□□ 17.7
TPM3-210ENST00000368530 POLKQ9UBT6 870 aa13.49□□□□□ -0.25
TPM3-210ENST00000368530 C4BP0C0L5 1744 aa13.48□□□□□ -0.25
TPM3-210ENST00000368530 HMGB2P26583 209 aaKnown RBP13.48□□□□□ -0.25
TPM3-210ENST00000368530 MAP2P11137 1827 aaKnown RBP13.48□□□□□ -0.25
TPM3-210ENST00000368530 ITGB4P16144 1822 aa13.47□□□□□ -0.25
TPM3-210ENST00000368530 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.47□□□□□ -0.25
TPM3-210ENST00000368530 LOC102724428A0A0B4J2F2 783 aa13.47□□□□□ -0.25
TPM3-210ENST00000368530 SIK1P57059 783 aa13.47□□□□□ -0.25
TPM3-210ENST00000368530 ITPK1Q13572 414 aa13.47□□□□□ -0.25
TPM3-210ENST00000368530 LINC00116Q8NCU8 138 aa13.47□□□□□ -0.25
TPM3-210ENST00000368530 PRKRIP1Q9H875 184 aaPredicted RBP13.47□□□□□ -0.25
TPM3-210ENST00000368530 ASAP1Q9ULH1 1129 aa13.47□□□□□ -0.25
TPM3-210ENST00000368530 SPG7Q9UQ90 795 aa13.47□□□□□ -0.25
TPM3-210ENST00000368530 ANKRD26Q9UPS8 1709 aa13.47□□□□□ -0.25
TPM3-210ENST00000368530 PPM1GO15355 546 aaPredicted RBP13.46□□□□□ -0.25
TPM3-210ENST00000368530 PHKG2P15735 406 aa13.45□□□□□ -0.26
TPM3-210ENST00000368530 SSFA2P28290 1259 aa13.45□□□□□ -0.26
TPM3-210ENST00000368530 AK7Q96M32 723 aa13.45□□□□□ -0.26
TPM3-210ENST00000368530 ADCY9O60503 1353 aa13.45□□□□□ -0.26
TPM3-210ENST00000368530 CEP350Q5VT06 3117 aa13.45□□□□□ -0.26
TPM3-210ENST00000368530 UBR3Q6ZT12 1888 aa13.45□□□□□ -0.26
TPM3-210ENST00000368530 PHF14O94880 888 aa13.44□□□□□ -0.26
TPM3-210ENST00000368530 ATG3Q9NT62 314 aa13.44□□□□□ -0.26
TPM3-210ENST00000368530 ATP10DQ9P241 1426 aa13.44□□□□□ -0.26
TPM3-210ENST00000368530 EIF4A2Q14240 407 aaKnown RBP13.44□□□□□ -0.26
TPM3-210ENST00000368530 IFNL2Q8IZJ0 200 aa13.44□□□□□ -0.26
TPM3-210ENST00000368530 SLC4A9Q96Q91 983 aa13.44□□□□□ -0.26
TPM3-210ENST00000368530 CCDC184Q52MB2 194 aa13.43□□□□□ -0.26
TPM3-210ENST00000368530 TMOD3Q9NYL9 352 aa13.43□□□□□ -0.26
TPM3-210ENST00000368530 IGSF1Q8N6C5 1336 aa13.42□□□□□ -0.26
TPM3-210ENST00000368530 CAPN15O75808 1086 aa13.41□□□□□ -0.26
TPM3-210ENST00000368530 ATP6V1AP38606 617 aa13.41□□□□□ -0.26
TPM3-210ENST00000368530 PANK3Q9H999 370 aa13.41□□□□□ -0.26
TPM3-210ENST00000368530 KDRP35968 1356 aa13.4□□□□□ -0.26
TPM3-210ENST00000368530 PLEKHG2Q9H7P9 1386 aa13.4□□□□□ -0.26
TPM3-210ENST00000368530 GNPATO15228 680 aa13.4□□□□□ -0.26
TPM3-210ENST00000368530 WWC3Q9ULE0 1092 aa13.39□□□□□ -0.27
TPM3-210ENST00000368530 ERVV-2B6SEH9 535 aa13.39□□□□□ -0.27
TPM3-210ENST00000368530 TNNT2P45379 298 aaPredicted RBP13.39□□□□□ -0.27
TPM3-210ENST00000368530 MRS2Q9HD23 443 aa13.39□□□□□ -0.27
TPM3-210ENST00000368530 MMP10P09238 476 aa13.38□□□□□ -0.27
TPM3-210ENST00000368530 RC3H1Q5TC82 1133 aaKnown RBP13.38□□□□□ -0.27
TPM3-210ENST00000368530 GPBP1L1Q9HC44 474 aaPredicted RBP13.38□□□□□ -0.27
TPM3-210ENST00000368530 ARHGEF1Q92888 912 aaKnown RBP13.37□□□□□ -0.27
TPM3-210ENST00000368530 DCAF5Q96JK2 942 aa13.37□□□□□ -0.27
TPM3-210ENST00000368530 PXDNLA1KZ92 1463 aa13.36□□□□□ -0.27
TPM3-210ENST00000368530 KDM6AO15550 1401 aaPredicted RBP13.36□□□□□ -0.27
TPM3-210ENST00000368530 TRAPPC3LQ5T215 181 aa13.36□□□□□ -0.27
TPM3-210ENST00000368530 KIAA1551Q9HCM1 1747 aa13.35□□□□□ -0.27
TPM3-210ENST00000368530 KIF3CO14782 793 aa13.35□□□□□ -0.27
TPM3-210ENST00000368530 PER1O15534 1290 aaPredicted RBP13.35□□□□□ -0.27
TPM3-210ENST00000368530 GYS1P13807 737 aa13.35□□□□□ -0.27
TPM3-210ENST00000368530 CC2D1BQ5T0F9 858 aaKnown RBP13.35□□□□□ -0.27
TPM3-210ENST00000368530 NLGN1Q8N2Q7 840 aa13.35□□□□□ -0.27
TPM3-210ENST00000368530 ZNF526Q8TF50 670 aaPredicted RBP13.35□□□□□ -0.27
TPM3-210ENST00000368530 RTCBQ9Y3I0 505 aaKnown RBP13.35□□□□□ -0.27
TPM3-210ENST00000368530 ZNF831Q5JPB2 1677 aa13.35□□□□□ -0.27
TPM3-210ENST00000368530 RPS6KA4O75676 772 aa13.34□□□□□ -0.27
TPM3-210ENST00000368530 TGFB2P61812 414 aa13.34□□□□□ -0.27
TPM3-210ENST00000368530 CACNB1Q02641 598 aaPredicted RBP13.34□□□□□ -0.27
TPM3-210ENST00000368530 PLEKHO1Q53GL0 409 aaPredicted RBP13.34□□□□□ -0.27
TPM3-210ENST00000368530 FAM9BQ8IZU0 186 aa13.34□□□□□ -0.27
TPM3-210ENST00000368530 CICQ96RK0 1608 aaPredicted RBP13.34□□□□□ -0.27
TPM3-210ENST00000368530 CNTNAP4Q9C0A0 1308 aa13.34□□□□□ -0.27
TPM3-210ENST00000368530 A0A0G2JLW4 131 aa13.34□□□□□ -0.27
TPM3-210ENST00000368530 HSP90AB1P08238 724 aaKnown RBP13.34□□□□□ -0.27
TPM3-210ENST00000368530 HSPA6P17066 643 aa13.34□□□□□ -0.27
TPM3-210ENST00000368530 KCNA3P22001 575 aa13.34□□□□□ -0.27
TPM3-210ENST00000368530 AEBP1Q8IUX7 1158 aa13.34□□□□□ -0.27
TPM3-210ENST00000368530 RBM42Q9BTD8 480 aaKnown RBP13.34□□□□□ -0.27
TPM3-210ENST00000368530 C10orf71Q711Q0 1435 aa13.33□□□□□ -0.28
TPM3-210ENST00000368530 KIF13BQ9NQT8 1826 aa13.33□□□□□ -0.28
TPM3-210ENST00000368530 RALBP1Q15311 655 aa13.33□□□□□ -0.28
TPM3-210ENST00000368530 AMOTQ4VCS5 1084 aa13.33□□□□□ -0.28
TPM3-210ENST00000368530 CABP4P57796 275 aa13.32□□□□□ -0.28
TPM3-210ENST00000368530 ZNF530Q6P9A1 599 aaPredicted RBP13.32□□□□□ -0.28
TPM3-210ENST00000368530 ZNF219Q9P2Y4 722 aaPredicted RBP13.32□□□□□ -0.28
TPM3-210ENST00000368530 KNSTRNQ9Y448 316 aa13.32□□□□□ -0.28
TPM3-210ENST00000368530 MYBBP1AQ9BQG0 1328 aaKnown RBP13.31□□□□□ -0.28
TPM3-210ENST00000368530 COL5A3P25940 1745 aaPredicted RBP13.31□□□□□ -0.28
TPM3-210ENST00000368530 DPEP1P16444 411 aa13.31□□□□□ -0.28
TPM3-210ENST00000368530 IFFO2Q5TF58 517 aa13.31□□□□□ -0.28
TPM3-210ENST00000368530 NFATC2IPQ8NCF5 419 aa13.31□□□□□ -0.28
TPM3-210ENST00000368530 MYH14Q7Z406 1995 aaKnown RBP13.3□□□□□ -0.28
TPM3-210ENST00000368530 MTHFSP49914 203 aa13.3□□□□□ -0.28
TPM3-210ENST00000368530 HNRNPUQ00839 825 aaKnown RBP eCLIP13.3□□□□□ -0.28
TPM3-210ENST00000368530 BCS1LQ9Y276 419 aa13.3□□□□□ -0.28
TPM3-210ENST00000368530 PTCD1O75127 700 aaKnown RBP13.29□□□□□ -0.28
TPM3-210ENST00000368530 IL13P35225 146 aa13.29□□□□□ -0.28
TPM3-210ENST00000368530 RFC4P35249 363 aa13.29□□□□□ -0.28
TPM3-210ENST00000368530 CRKLP46109 303 aaKnown RBP13.29□□□□□ -0.28
TPM3-210ENST00000368530 N4BP2Q86UW6 1770 aaPredicted RBP13.29□□□□□ -0.28
TPM3-210ENST00000368530 C4AP0C0L4 1744 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 263.1 ms