RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 SH3D19Q5HYK7 790 aa8.27□□□□□ -1.09
ECHDC1-201ENST00000368287 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.27□□□□□ -1.09
ECHDC1-201ENST00000368287 NOP53Q9NZM5 478 aaKnown RBP8.27□□□□□ -1.09
ECHDC1-201ENST00000368287 HOXB4P17483 251 aaPredicted RBP8.26□□□□□ -1.09
ECHDC1-201ENST00000368287 CHRNA4P43681 627 aa8.26□□□□□ -1.09
ECHDC1-201ENST00000368287 ZMYM1Q5SVZ6 1142 aa8.26□□□□□ -1.09
ECHDC1-201ENST00000368287 SLCO4C1Q6ZQN7 724 aa8.26□□□□□ -1.09
ECHDC1-201ENST00000368287 KRTAP1-3Q8IUG1 177 aa8.26□□□□□ -1.09
ECHDC1-201ENST00000368287 ESF1Q9H501 851 aaKnown RBP8.26□□□□□ -1.09
ECHDC1-201ENST00000368287 ITGB7P26010 798 aa8.25□□□□□ -1.09
ECHDC1-201ENST00000368287 RNF20Q5VTR2 975 aa8.25□□□□□ -1.09
ECHDC1-201ENST00000368287 SLC24A3Q9HC58 644 aa8.25□□□□□ -1.09
ECHDC1-201ENST00000368287 GGA1Q9UJY5 639 aa8.25□□□□□ -1.09
ECHDC1-201ENST00000368287 A0A1B0GTH6 734 aa8.24□□□□□ -1.09
ECHDC1-201ENST00000368287 ZBBXA8MT70 800 aa8.24□□□□□ -1.09
ECHDC1-201ENST00000368287 CSB-PGBD3P0DP91 1061 aa8.24□□□□□ -1.09
ECHDC1-201ENST00000368287 PHKA2P46019 1235 aa8.24□□□□□ -1.09
ECHDC1-201ENST00000368287 DOC2BQ14184 412 aa8.24□□□□□ -1.09
ECHDC1-201ENST00000368287 LBRQ14739 615 aaKnown RBP8.24□□□□□ -1.09
ECHDC1-201ENST00000368287 PGBD3Q8N328 593 aa8.24□□□□□ -1.09
ECHDC1-201ENST00000368287 ATXN7L1Q9ULK2 861 aaPredicted RBP8.24□□□□□ -1.09
ECHDC1-201ENST00000368287 SCTRP47872 440 aa8.23□□□□□ -1.09
ECHDC1-201ENST00000368287 C2CD2LO14523 706 aa8.22□□□□□ -1.09
ECHDC1-201ENST00000368287 UBAP2LQ14157 1087 aaKnown RBP8.22□□□□□ -1.09
ECHDC1-201ENST00000368287 BCANQ96GW7 911 aa8.22□□□□□ -1.09
ECHDC1-201ENST00000368287 BTBD6Q96KE9 485 aa8.22□□□□□ -1.09
ECHDC1-201ENST00000368287 OSBPL3Q9H4L5 887 aa8.22□□□□□ -1.09
ECHDC1-201ENST00000368287 RAB6BQ9NRW1 208 aa8.22□□□□□ -1.09
ECHDC1-201ENST00000368287 FGFR3P22607 806 aa8.21□□□□□ -1.1
ECHDC1-201ENST00000368287 DGKGP49619 791 aa8.21□□□□□ -1.1
ECHDC1-201ENST00000368287 EFHC2Q5JST6 749 aa8.21□□□□□ -1.1
ECHDC1-201ENST00000368287 ABHD17AQ96GS6 310 aa8.21□□□□□ -1.1
ECHDC1-201ENST00000368287 RUBCNLQ9H714 662 aa8.21□□□□□ -1.1
ECHDC1-201ENST00000368287 PCDHB11Q9Y5F2 797 aa8.21□□□□□ -1.1
ECHDC1-201ENST00000368287 SCO2A0A1W2PP80 73 aa8.2□□□□□ -1.1
ECHDC1-201ENST00000368287 TRAK2O60296 914 aa8.2□□□□□ -1.1
ECHDC1-201ENST00000368287 EPXP11678 715 aa8.2□□□□□ -1.1
ECHDC1-201ENST00000368287 GTF2E1P29083 439 aaPredicted RBP8.2□□□□□ -1.1
ECHDC1-201ENST00000368287 CENPCQ03188 943 aa8.2□□□□□ -1.1
ECHDC1-201ENST00000368287 GNASQ5JWF2 1037 aa8.2□□□□□ -1.1
ECHDC1-201ENST00000368287 CNKSR1Q969H4 720 aa8.2□□□□□ -1.1
ECHDC1-201ENST00000368287 ZSCAN10Q96SZ4 725 aaPredicted RBP8.2□□□□□ -1.1
ECHDC1-201ENST00000368287 ESYT1Q9BSJ8 1104 aa8.2□□□□□ -1.1
ECHDC1-201ENST00000368287 FBXO45P0C2W1 286 aa8.19□□□□□ -1.1
ECHDC1-201ENST00000368287 CTBSQ01459 385 aa8.19□□□□□ -1.1
ECHDC1-201ENST00000368287 RNF135Q8IUD6 432 aa8.19□□□□□ -1.1
ECHDC1-201ENST00000368287 TRIM34Q9BYJ4 488 aa8.19□□□□□ -1.1
ECHDC1-201ENST00000368287 GNRH1P01148 92 aa8.18□□□□□ -1.1
ECHDC1-201ENST00000368287 IL2RAP01589 272 aa8.18□□□□□ -1.1
ECHDC1-201ENST00000368287 MSX1P28360 303 aa8.18□□□□□ -1.1
ECHDC1-201ENST00000368287 GATA4P43694 442 aa8.18□□□□□ -1.1
ECHDC1-201ENST00000368287 NEURL1BA8MQ27 555 aa8.17□□□□□ -1.1
ECHDC1-201ENST00000368287 ARAFP10398 606 aa8.17□□□□□ -1.1
ECHDC1-201ENST00000368287 TMEM214Q6NUQ4 689 aaKnown RBP8.17□□□□□ -1.1
ECHDC1-201ENST00000368287 BNIP3LO60238 219 aa8.16□□□□□ -1.1
ECHDC1-201ENST00000368287 MCCD1P59942 119 aaPredicted RBP8.16□□□□□ -1.1
ECHDC1-201ENST00000368287 C4orf17Q53FE4 359 aa8.16□□□□□ -1.1
ECHDC1-201ENST00000368287 LCE3BQ5TA77 95 aa8.16□□□□□ -1.1
ECHDC1-201ENST00000368287 CHSY3Q70JA7 882 aa8.16□□□□□ -1.1
ECHDC1-201ENST00000368287 NDFIP2Q9NV92 336 aa8.16□□□□□ -1.1
ECHDC1-201ENST00000368287 RFC5P40937 340 aa8.15□□□□□ -1.1
ECHDC1-201ENST00000368287 ZNF592Q92610 1267 aa8.15□□□□□ -1.1
ECHDC1-201ENST00000368287 DDRGK1Q96HY6 314 aa8.15□□□□□ -1.1
ECHDC1-201ENST00000368287 FIGNL1Q6PIW4 674 aa8.13□□□□□ -1.11
ECHDC1-201ENST00000368287 FHDC1Q9C0D6 1143 aaPredicted RBP8.13□□□□□ -1.11
ECHDC1-201ENST00000368287 HRH3Q9Y5N1 445 aa8.13□□□□□ -1.11
ECHDC1-201ENST00000368287 MYCP01106 439 aaPredicted RBP8.12□□□□□ -1.11
ECHDC1-201ENST00000368287 SPATA31C1P0DKV0 1188 aa8.12□□□□□ -1.11
ECHDC1-201ENST00000368287 XAGE2Q96GT9 111 aa8.12□□□□□ -1.11
ECHDC1-201ENST00000368287 CRISPLD1Q9H336 500 aa8.12□□□□□ -1.11
ECHDC1-201ENST00000368287 ZNF330Q9Y3S2 320 aaPredicted RBP8.12□□□□□ -1.11
ECHDC1-201ENST00000368287 ADH6P28332 368 aa8.11□□□□□ -1.11
ECHDC1-201ENST00000368287 RSPO4Q2I0M5 234 aaPredicted RBP8.11□□□□□ -1.11
ECHDC1-201ENST00000368287 KRTAP4-12Q9BQ66 201 aa8.11□□□□□ -1.11
ECHDC1-201ENST00000368287 PLVAPQ9BX97 442 aa8.11□□□□□ -1.11
ECHDC1-201ENST00000368287 FAM117AQ9C073 453 aa8.11□□□□□ -1.11
ECHDC1-201ENST00000368287 NR1H3Q13133 447 aa8.1□□□□□ -1.11
ECHDC1-201ENST00000368287 FOXD4L6Q3SYB3 417 aaPredicted RBP8.1□□□□□ -1.11
ECHDC1-201ENST00000368287 ESCO1Q5FWF5 840 aa8.1□□□□□ -1.11
ECHDC1-201ENST00000368287 FOXD4L3Q6VB84 417 aaPredicted RBP8.1□□□□□ -1.11
ECHDC1-201ENST00000368287 RHBDD1Q8TEB9 315 aa8.1□□□□□ -1.11
ECHDC1-201ENST00000368287 TRIM11Q96F44 468 aa8.1□□□□□ -1.11
ECHDC1-201ENST00000368287 KDM4CQ9H3R0 1056 aa8.1□□□□□ -1.11
ECHDC1-201ENST00000368287 ZFP64Q9NPA5 681 aa8.1□□□□□ -1.11
ECHDC1-201ENST00000368287 PCDHGC4Q9Y5F7 938 aa8.1□□□□□ -1.11
ECHDC1-201ENST00000368287 ZCCHC2Q9C0B9 1178 aaKnown RBP8.09□□□□□ -1.11
ECHDC1-201ENST00000368287 TMEM259Q4ZIN3 620 aa8.08□□□□□ -1.12
ECHDC1-201ENST00000368287 NKAPLQ5M9Q1 402 aa8.08□□□□□ -1.12
ECHDC1-201ENST00000368287 ARTNQ5T4W7 220 aa8.08□□□□□ -1.12
ECHDC1-201ENST00000368287 TBC1D9Q6ZT07 1266 aa8.08□□□□□ -1.12
ECHDC1-201ENST00000368287 NBPF11Q86T75 865 aa8.08□□□□□ -1.12
ECHDC1-201ENST00000368287 GPBP1L1Q9HC44 474 aaPredicted RBP8.08□□□□□ -1.12
ECHDC1-201ENST00000368287 PLA2G4AP47712 749 aa8.07□□□□□ -1.12
ECHDC1-201ENST00000368287 FCHSD1Q86WN1 690 aa8.07□□□□□ -1.12
ECHDC1-201ENST00000368287 GJD4Q96KN9 370 aaPredicted RBP8.07□□□□□ -1.12
ECHDC1-201ENST00000368287 AVENQ9NQS1 362 aaPredicted RBP8.07□□□□□ -1.12
ECHDC1-201ENST00000368287 TPSG1Q9NRR2 321 aa8.07□□□□□ -1.12
ECHDC1-201ENST00000368287 DNAAF2Q9NVR5 837 aaKnown RBP8.07□□□□□ -1.12
ECHDC1-201ENST00000368287 DCDC2BA2VCK2 349 aa8.06□□□□□ -1.12
ECHDC1-201ENST00000368287 ATXN7O15265 892 aaPredicted RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms