RNA–Protein interactions for RNA: ENST00000363347.1

RNU6-839P-201, Transcript of RNA, U6 small nuclear 839, pseudogene, humanhuman

BASIC

Gene RNU6-839P, Length 108 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-839P-201ENST00000363347 CBLBQ13191 982 aa7.67□□□□□ -1.18
RNU6-839P-201ENST00000363347 TRMT44Q8IYL2 757 aaKnown RBP7.67□□□□□ -1.18
RNU6-839P-201ENST00000363347 KANK4Q5T7N3 995 aaPredicted RBP7.66□□□□□ -1.18
RNU6-839P-201ENST00000363347 PODNQ7Z5L7 613 aa7.66□□□□□ -1.18
RNU6-839P-201ENST00000363347 DZIP3Q86Y13 1208 aaKnown RBP7.66□□□□□ -1.18
RNU6-839P-201ENST00000363347 PLEKHM2Q8IWE5 1019 aa7.66□□□□□ -1.18
RNU6-839P-201ENST00000363347 BEND7Q8N7W2 519 aaPredicted RBP7.66□□□□□ -1.18
RNU6-839P-201ENST00000363347 PGPEP1Q9NXJ5 209 aa7.66□□□□□ -1.18
RNU6-839P-201ENST00000363347 GAS6Q14393 721 aa7.65□□□□□ -1.18
RNU6-839P-201ENST00000363347 PPP1R26Q5T8A7 1209 aaPredicted RBP7.65□□□□□ -1.18
RNU6-839P-201ENST00000363347 PLPP7Q8NBV4 271 aa7.65□□□□□ -1.18
RNU6-839P-201ENST00000363347 SENP3-EIF4A1A0A087X0R7 540 aa7.64□□□□□ -1.19
RNU6-839P-201ENST00000363347 NCOA4Q13772 614 aa7.64□□□□□ -1.19
RNU6-839P-201ENST00000363347 TMEM88BA6NKF7 163 aa7.63□□□□□ -1.19
RNU6-839P-201ENST00000363347 CTSOP43234 321 aaPredicted RBP7.63□□□□□ -1.19
RNU6-839P-201ENST00000363347 ERFEQ4G0M1 354 aa7.63□□□□□ -1.19
RNU6-839P-201ENST00000363347 PHTF2Q8N3S3 785 aa7.63□□□□□ -1.19
RNU6-839P-201ENST00000363347 STK32AQ8WU08 396 aa7.63□□□□□ -1.19
RNU6-839P-201ENST00000363347 SLC10A4Q96EP9 437 aa7.63□□□□□ -1.19
RNU6-839P-201ENST00000363347 MKRN1Q9UHC7 482 aaKnown RBP7.63□□□□□ -1.19
RNU6-839P-201ENST00000363347 ZMIZ1Q9ULJ6 1067 aa7.63□□□□□ -1.19
RNU6-839P-201ENST00000363347 NOVA2Q9UNW9 492 aaKnown RBP7.63□□□□□ -1.19
RNU6-839P-201ENST00000363347 CCDC9Q9Y3X0 531 aaKnown RBP7.63□□□□□ -1.19
RNU6-839P-201ENST00000363347 USP17L15C9J2P7 530 aa7.62□□□□□ -1.19
RNU6-839P-201ENST00000363347 USP17L10C9JJH3 530 aa7.62□□□□□ -1.19
RNU6-839P-201ENST00000363347 USP17L13C9JLJ4 530 aa7.62□□□□□ -1.19
RNU6-839P-201ENST00000363347 USP17L12C9JPN9 530 aa7.62□□□□□ -1.19
RNU6-839P-201ENST00000363347 USP17L11C9JVI0 530 aa7.62□□□□□ -1.19
RNU6-839P-201ENST00000363347 USP17L21D6R901 530 aa7.62□□□□□ -1.19
RNU6-839P-201ENST00000363347 USP17L18D6R9N7 530 aa7.62□□□□□ -1.19
RNU6-839P-201ENST00000363347 USP17L22D6RA61 530 aa7.62□□□□□ -1.19
RNU6-839P-201ENST00000363347 USP17L17D6RBQ6 530 aa7.62□□□□□ -1.19
RNU6-839P-201ENST00000363347 USP17L19D6RCP7 530 aa7.62□□□□□ -1.19
RNU6-839P-201ENST00000363347 USP17L20D6RJB6 530 aa7.62□□□□□ -1.19
RNU6-839P-201ENST00000363347 BRD1O95696 1058 aa7.62□□□□□ -1.19
RNU6-839P-201ENST00000363347 USP17L24Q0WX57 530 aa7.62□□□□□ -1.19
RNU6-839P-201ENST00000363347 KCNA1Q09470 495 aa7.61□□□□□ -1.19
RNU6-839P-201ENST00000363347 ELOAQ14241 798 aaKnown RBP7.61□□□□□ -1.19
RNU6-839P-201ENST00000363347 EML3Q32P44 896 aa7.61□□□□□ -1.19
RNU6-839P-201ENST00000363347 CRTC2Q53ET0 693 aaPredicted RBP7.61□□□□□ -1.19
RNU6-839P-201ENST00000363347 TMEM164Q5U3C3 297 aa7.61□□□□□ -1.19
RNU6-839P-201ENST00000363347 NEDD1Q8NHV4 660 aa7.61□□□□□ -1.19
RNU6-839P-201ENST00000363347 RNF217Q8TC41 542 aa7.61□□□□□ -1.19
RNU6-839P-201ENST00000363347 INSM2Q96T92 566 aaPredicted RBP7.61□□□□□ -1.19
RNU6-839P-201ENST00000363347 POLMQ9NP87 494 aaPredicted RBP7.61□□□□□ -1.19
RNU6-839P-201ENST00000363347 DOLKQ9UPQ8 538 aa7.61□□□□□ -1.19
RNU6-839P-201ENST00000363347 FAM196BA6NMK8 535 aa7.6□□□□□ -1.19
RNU6-839P-201ENST00000363347 PATL2C9JE40 543 aaKnown RBP7.6□□□□□ -1.19
RNU6-839P-201ENST00000363347 ATP5J2-PTCD1G3V325 749 aa7.6□□□□□ -1.19
RNU6-839P-201ENST00000363347 GIGYF1O75420 1035 aaPredicted RBP7.6□□□□□ -1.19
RNU6-839P-201ENST00000363347 RASA1P20936 1047 aa7.6□□□□□ -1.19
RNU6-839P-201ENST00000363347 BAG6P46379 1132 aa7.6□□□□□ -1.19
RNU6-839P-201ENST00000363347 MAP7D1Q3KQU3 841 aa7.6□□□□□ -1.19
RNU6-839P-201ENST00000363347 TSGA10IPQ3SY00 556 aa7.6□□□□□ -1.19
RNU6-839P-201ENST00000363347 OXLD1Q5BKU9 147 aa7.6□□□□□ -1.19
RNU6-839P-201ENST00000363347 LARP1Q6PKG0 1096 aaKnown RBP7.6□□□□□ -1.19
RNU6-839P-201ENST00000363347 GZF1Q9H116 711 aaPredicted RBP7.6□□□□□ -1.19
RNU6-839P-201ENST00000363347 MBIPQ9NS73 344 aa7.6□□□□□ -1.19
RNU6-839P-201ENST00000363347 RELBQ01201 579 aa7.59□□□□□ -1.19
RNU6-839P-201ENST00000363347 KRTAP1-3Q8IUG1 177 aa7.59□□□□□ -1.19
RNU6-839P-201ENST00000363347 AGBL1Q96MI9 1066 aa7.59□□□□□ -1.19
RNU6-839P-201ENST00000363347 CCDC85AQ96PX6 553 aaPredicted RBP7.59□□□□□ -1.19
RNU6-839P-201ENST00000363347 CHIC2Q9UKJ5 165 aa7.59□□□□□ -1.19
RNU6-839P-201ENST00000363347 LZTS3O60299 673 aaPredicted RBP7.58□□□□□ -1.2
RNU6-839P-201ENST00000363347 BCRP11274 1271 aa7.58□□□□□ -1.2
RNU6-839P-201ENST00000363347 PTK7Q13308 1070 aa7.58□□□□□ -1.2
RNU6-839P-201ENST00000363347 NBPF20Q3BBV1 942 aa7.58□□□□□ -1.2
RNU6-839P-201ENST00000363347 ZNF594Q96JF6 807 aaPredicted RBP7.58□□□□□ -1.2
RNU6-839P-201ENST00000363347 CUEDC1Q9NWM3 386 aaPredicted RBP7.58□□□□□ -1.2
RNU6-839P-201ENST00000363347 TMCO4Q5TGY1 634 aa7.57□□□□□ -1.2
RNU6-839P-201ENST00000363347 TRIM50Q86XT4 487 aa7.57□□□□□ -1.2
RNU6-839P-201ENST00000363347 OGFOD1Q8N543 542 aa7.57□□□□□ -1.2
RNU6-839P-201ENST00000363347 NOD1Q9Y239 953 aa7.57□□□□□ -1.2
RNU6-839P-201ENST00000363347 IGF1RP08069 1367 aa7.57□□□□□ -1.2
RNU6-839P-201ENST00000363347 FURINP09958 794 aa7.56□□□□□ -1.2
RNU6-839P-201ENST00000363347 RAB15P59190 212 aa7.56□□□□□ -1.2
RNU6-839P-201ENST00000363347 CLDN10P78369 228 aa7.56□□□□□ -1.2
RNU6-839P-201ENST00000363347 DHX9Q08211 1270 aaKnown RBP7.56□□□□□ -1.2
RNU6-839P-201ENST00000363347 RNF20Q5VTR2 975 aa7.56□□□□□ -1.2
RNU6-839P-201ENST00000363347 B4GALNT3Q6L9W6 998 aa7.56□□□□□ -1.2
RNU6-839P-201ENST00000363347 ANKMY2Q8IV38 441 aa7.56□□□□□ -1.2
RNU6-839P-201ENST00000363347 FAM200AQ8TCP9 573 aa7.56□□□□□ -1.2
RNU6-839P-201ENST00000363347 DNAAF2Q9NVR5 837 aaKnown RBP7.56□□□□□ -1.2
RNU6-839P-201ENST00000363347 PCDHB11Q9Y5F2 797 aa7.56□□□□□ -1.2
RNU6-839P-201ENST00000363347 IVNS1ABPQ9Y6Y0 642 aa7.56□□□□□ -1.2
RNU6-839P-201ENST00000363347 ATP1A2P50993 1020 aa7.55□□□□□ -1.2
RNU6-839P-201ENST00000363347 DPYDQ12882 1025 aa7.55□□□□□ -1.2
RNU6-839P-201ENST00000363347 CDCA7Q9BWT1 371 aaPredicted RBP7.55□□□□□ -1.2
RNU6-839P-201ENST00000363347 CDV3Q9UKY7 258 aaKnown RBP7.55□□□□□ -1.2
RNU6-839P-201ENST00000363347 ESPNB1AK53 854 aa7.54□□□□□ -1.2
RNU6-839P-201ENST00000363347 GTF2IP78347 998 aa7.54□□□□□ -1.2
RNU6-839P-201ENST00000363347 ZNF395Q9H8N7 513 aaPredicted RBP7.54□□□□□ -1.2
RNU6-839P-201ENST00000363347 KIAA1024Q9UPX6 916 aa7.54□□□□□ -1.2
RNU6-839P-201ENST00000363347 KRBA1A5PL33 1030 aa7.53□□□□□ -1.2
RNU6-839P-201ENST00000363347 PSME1Q06323 249 aa7.53□□□□□ -1.2
RNU6-839P-201ENST00000363347 FOXD4L5Q5VV16 416 aaPredicted RBP7.53□□□□□ -1.2
RNU6-839P-201ENST00000363347 SEPT12Q8IYM1 358 aa7.53□□□□□ -1.2
RNU6-839P-201ENST00000363347 ACDQ96AP0 544 aa7.53□□□□□ -1.2
RNU6-839P-201ENST00000363347 ZNF837Q96EG3 531 aaPredicted RBP7.53□□□□□ -1.2
RNU6-839P-201ENST00000363347 GMCL1Q96IK5 515 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms