RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 LINC00114Q6XXX2 140 aa6.27□□□□□ -1.41
RNU6-238P-201ENST00000363313 KDM4CQ9H3R0 1056 aa6.27□□□□□ -1.41
RNU6-238P-201ENST00000363313 OSBPL3Q9H4L5 887 aa6.27□□□□□ -1.41
RNU6-238P-201ENST00000363313 NOP53Q9NZM5 478 aaKnown RBP6.27□□□□□ -1.41
RNU6-238P-201ENST00000363313 GNB5O14775 395 aa6.26□□□□□ -1.41
RNU6-238P-201ENST00000363313 COL8A1P27658 744 aa6.26□□□□□ -1.41
RNU6-238P-201ENST00000363313 SLCO4C1Q6ZQN7 724 aa6.26□□□□□ -1.41
RNU6-238P-201ENST00000363313 FAM117AQ9C073 453 aa6.26□□□□□ -1.41
RNU6-238P-201ENST00000363313 FBXO45P0C2W1 286 aa6.25□□□□□ -1.41
RNU6-238P-201ENST00000363313 CSB-PGBD3P0DP91 1061 aa6.25□□□□□ -1.41
RNU6-238P-201ENST00000363313 GTF2E1P29083 439 aaPredicted RBP6.25□□□□□ -1.41
RNU6-238P-201ENST00000363313 CENPCQ03188 943 aa6.25□□□□□ -1.41
RNU6-238P-201ENST00000363313 NR1H3Q13133 447 aa6.25□□□□□ -1.41
RNU6-238P-201ENST00000363313 UBAP2LQ14157 1087 aaKnown RBP6.25□□□□□ -1.41
RNU6-238P-201ENST00000363313 PGBD3Q8N328 593 aa6.25□□□□□ -1.41
RNU6-238P-201ENST00000363313 CNKSR1Q969H4 720 aa6.25□□□□□ -1.41
RNU6-238P-201ENST00000363313 XAGE2Q96GT9 111 aa6.25□□□□□ -1.41
RNU6-238P-201ENST00000363313 HRH3Q9Y5N1 445 aa6.25□□□□□ -1.41
RNU6-238P-201ENST00000363313 THBS1P07996 1170 aa6.24□□□□□ -1.41
RNU6-238P-201ENST00000363313 HOXB4P17483 251 aaPredicted RBP6.24□□□□□ -1.41
RNU6-238P-201ENST00000363313 ESCO1Q5FWF5 840 aa6.24□□□□□ -1.41
RNU6-238P-201ENST00000363313 EFHC2Q5JST6 749 aa6.24□□□□□ -1.41
RNU6-238P-201ENST00000363313 GNASQ5JWF2 1037 aa6.24□□□□□ -1.41
RNU6-238P-201ENST00000363313 C1orf229Q6ZS94 237 aaPredicted RBP6.24□□□□□ -1.41
RNU6-238P-201ENST00000363313 ZSCAN10Q96SZ4 725 aaPredicted RBP6.24□□□□□ -1.41
RNU6-238P-201ENST00000363313 RRAGCQ9HB90 399 aa6.24□□□□□ -1.41
RNU6-238P-201ENST00000363313 ARHGEF10LQ9HCE6 1279 aa6.24□□□□□ -1.41
RNU6-238P-201ENST00000363313 FURINP09958 794 aa6.23□□□□□ -1.41
RNU6-238P-201ENST00000363313 ARAFP10398 606 aa6.23□□□□□ -1.41
RNU6-238P-201ENST00000363313 FIGNL1Q6PIW4 674 aa6.23□□□□□ -1.41
RNU6-238P-201ENST00000363313 BTBD6Q96KE9 485 aa6.23□□□□□ -1.41
RNU6-238P-201ENST00000363313 GJD4Q96KN9 370 aaPredicted RBP6.23□□□□□ -1.41
RNU6-238P-201ENST00000363313 CRISPLD1Q9H336 500 aa6.23□□□□□ -1.41
RNU6-238P-201ENST00000363313 NDFIP2Q9NV92 336 aa6.23□□□□□ -1.41
RNU6-238P-201ENST00000363313 PCDHB11Q9Y5F2 797 aa6.23□□□□□ -1.41
RNU6-238P-201ENST00000363313 MYCP01106 439 aaPredicted RBP6.22□□□□□ -1.41
RNU6-238P-201ENST00000363313 EPXP11678 715 aa6.22□□□□□ -1.41
RNU6-238P-201ENST00000363313 BMP4P12644 408 aa6.22□□□□□ -1.41
RNU6-238P-201ENST00000363313 SCTRP47872 440 aa6.22□□□□□ -1.41
RNU6-238P-201ENST00000363313 PSMG3-AS1Q96PY0 264 aa6.22□□□□□ -1.41
RNU6-238P-201ENST00000363313 AVENQ9NQS1 362 aaPredicted RBP6.22□□□□□ -1.41
RNU6-238P-201ENST00000363313 C1QTNF9BB2RNN3 333 aa6.21□□□□□ -1.42
RNU6-238P-201ENST00000363313 IL2RAP01589 272 aa6.21□□□□□ -1.42
RNU6-238P-201ENST00000363313 AMPD1P23109 780 aa6.21□□□□□ -1.42
RNU6-238P-201ENST00000363313 GRIN2CQ14957 1233 aa6.21□□□□□ -1.42
RNU6-238P-201ENST00000363313 C1orf216Q8TAB5 229 aa6.21□□□□□ -1.42
RNU6-238P-201ENST00000363313 PCMTD1Q96MG8 357 aaPredicted RBP6.21□□□□□ -1.42
RNU6-238P-201ENST00000363313 FHDC1Q9C0D6 1143 aaPredicted RBP6.21□□□□□ -1.42
RNU6-238P-201ENST00000363313 FGFR3P22607 806 aa6.2□□□□□ -1.42
RNU6-238P-201ENST00000363313 MSX1P28360 303 aa6.2□□□□□ -1.42
RNU6-238P-201ENST00000363313 DGKGP49619 791 aa6.2□□□□□ -1.42
RNU6-238P-201ENST00000363313 FAM182BQ5T319 152 aa6.2□□□□□ -1.42
RNU6-238P-201ENST00000363313 TMEM214Q6NUQ4 689 aaKnown RBP6.2□□□□□ -1.42
RNU6-238P-201ENST00000363313 CD163Q86VB7 1156 aa6.2□□□□□ -1.42
RNU6-238P-201ENST00000363313 BANK1Q8NDB2 785 aa6.2□□□□□ -1.42
RNU6-238P-201ENST00000363313 GPAMQ9HCL2 828 aa6.2□□□□□ -1.42
RNU6-238P-201ENST00000363313 GGA1Q9UJY5 639 aa6.2□□□□□ -1.42
RNU6-238P-201ENST00000363313 APBB1O00213 710 aa6.19□□□□□ -1.42
RNU6-238P-201ENST00000363313 C2CD2LO14523 706 aa6.19□□□□□ -1.42
RNU6-238P-201ENST00000363313 NLRP8Q86W28 1048 aa6.19□□□□□ -1.42
RNU6-238P-201ENST00000363313 PPARGC1BQ86YN6 1023 aaKnown RBP6.19□□□□□ -1.42
RNU6-238P-201ENST00000363313 RHBDD1Q8TEB9 315 aa6.19□□□□□ -1.42
RNU6-238P-201ENST00000363313 BNIP3LO60238 219 aa6.18□□□□□ -1.42
RNU6-238P-201ENST00000363313 C4orf17Q53FE4 359 aa6.18□□□□□ -1.42
RNU6-238P-201ENST00000363313 RNF135Q8IUD6 432 aa6.18□□□□□ -1.42
RNU6-238P-201ENST00000363313 SUV39H2Q9H5I1 410 aa6.18□□□□□ -1.42
RNU6-238P-201ENST00000363313 GPBP1L1Q9HC44 474 aaPredicted RBP6.18□□□□□ -1.42
RNU6-238P-201ENST00000363313 PCDHGC4Q9Y5F7 938 aa6.18□□□□□ -1.42
RNU6-238P-201ENST00000363313 CTBSQ01459 385 aa6.17□□□□□ -1.42
RNU6-238P-201ENST00000363313 USP4Q13107 963 aa6.17□□□□□ -1.42
RNU6-238P-201ENST00000363313 SIRT1Q96EB6 747 aa6.17□□□□□ -1.42
RNU6-238P-201ENST00000363313 ADH6P28332 368 aa6.16□□□□□ -1.42
RNU6-238P-201ENST00000363313 PHKA2P46019 1235 aa6.16□□□□□ -1.42
RNU6-238P-201ENST00000363313 ABHD17AQ96GS6 310 aa6.16□□□□□ -1.42
RNU6-238P-201ENST00000363313 KRTAP9-2Q9BYQ4 174 aa6.16□□□□□ -1.42
RNU6-238P-201ENST00000363313 RUBCNLQ9H714 662 aa6.16□□□□□ -1.42
RNU6-238P-201ENST00000363313 RAB6BQ9NRW1 208 aa6.16□□□□□ -1.42
RNU6-238P-201ENST00000363313 CEP126Q9P2H0 1117 aa6.16□□□□□ -1.42
RNU6-238P-201ENST00000363313 SPDYE3A6NKU9 549 aa6.15□□□□□ -1.42
RNU6-238P-201ENST00000363313 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.14□□□□□ -1.43
RNU6-238P-201ENST00000363313 SPATA31C1P0DKV0 1188 aa6.14□□□□□ -1.43
RNU6-238P-201ENST00000363313 CHRNA4P43681 627 aa6.14□□□□□ -1.43
RNU6-238P-201ENST00000363313 GATA4P43694 442 aa6.14□□□□□ -1.43
RNU6-238P-201ENST00000363313 TBC1D9Q6ZT07 1266 aa6.14□□□□□ -1.43
RNU6-238P-201ENST00000363313 CHSY3Q70JA7 882 aa6.14□□□□□ -1.43
RNU6-238P-201ENST00000363313 ZCCHC2Q9C0B9 1178 aaKnown RBP6.14□□□□□ -1.43
RNU6-238P-201ENST00000363313 DNAAF2Q9NVR5 837 aaKnown RBP6.14□□□□□ -1.43
RNU6-238P-201ENST00000363313 NDUFB9Q9Y6M9 179 aa6.14□□□□□ -1.43
RNU6-238P-201ENST00000363313 NEURL1BA8MQ27 555 aa6.13□□□□□ -1.43
RNU6-238P-201ENST00000363313 SEMA6BQ9H3T3 888 aa6.13□□□□□ -1.43
RNU6-238P-201ENST00000363313 ATXN7O15265 892 aaPredicted RBP6.12□□□□□ -1.43
RNU6-238P-201ENST00000363313 ITGB7P26010 798 aa6.12□□□□□ -1.43
RNU6-238P-201ENST00000363313 LAMC2Q13753 1193 aa6.12□□□□□ -1.43
RNU6-238P-201ENST00000363313 ZMYM1Q5SVZ6 1142 aa6.12□□□□□ -1.43
RNU6-238P-201ENST00000363313 CCDC85AQ96PX6 553 aaPredicted RBP6.12□□□□□ -1.43
RNU6-238P-201ENST00000363313 NIFKQ9BYG3 293 aaKnown RBP6.12□□□□□ -1.43
RNU6-238P-201ENST00000363313 CHIC2Q9UKJ5 165 aa6.12□□□□□ -1.43
RNU6-238P-201ENST00000363313 TNP2Q05952 138 aa6.11□□□□□ -1.43
RNU6-238P-201ENST00000363313 TLR1Q15399 786 aa6.11□□□□□ -1.43
RNU6-238P-201ENST00000363313 PHTF2Q8N3S3 785 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms