RNA–Protein interactions for RNA: ENST00000361204.8

SREBF2-201, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SREBF2, Length 5,240 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-201ENST00000361204 CAMSAP2Q08AD1 1489 aa20.96■□□□□ 0.95
SREBF2-201ENST00000361204 GSDMDP57764 484 aa20.96■□□□□ 0.95
SREBF2-201ENST00000361204 TMX3Q96JJ7 454 aa20.96■□□□□ 0.95
SREBF2-201ENST00000361204 RRAGDQ9NQL2 400 aaPredicted RBP20.96■□□□□ 0.95
SREBF2-201ENST00000361204 PAXBP1Q9Y5B6 917 aa20.96■□□□□ 0.95
SREBF2-201ENST00000361204 RAB3GAP1Q15042 981 aa20.96■□□□□ 0.95
SREBF2-201ENST00000361204 SLC52A1Q9NWF4 448 aa20.96■□□□□ 0.95
SREBF2-201ENST00000361204 ZNF830Q96NB3 372 aaPredicted RBP20.96■□□□□ 0.95
SREBF2-201ENST00000361204 MCM10Q7L590 875 aa20.95■□□□□ 0.94
SREBF2-201ENST00000361204 SMC5Q8IY18 1101 aa20.95■□□□□ 0.94
SREBF2-201ENST00000361204 TRERF1Q96PN7 1200 aa20.95■□□□□ 0.94
SREBF2-201ENST00000361204 CRACR2AQ9BSW2 395 aa20.95■□□□□ 0.94
SREBF2-201ENST00000361204 MIS18AQ9NYP9 233 aa20.95■□□□□ 0.94
SREBF2-201ENST00000361204 PARD3Q8TEW0 1356 aa20.94■□□□□ 0.94
SREBF2-201ENST00000361204 GTF2F1P35269 517 aaKnown RBP eCLIP20.94■□□□□ 0.942e-24■■■□□ 16.1
SREBF2-201ENST00000361204 PRIM1P49642 420 aaKnown RBP20.94■□□□□ 0.94
SREBF2-201ENST00000361204 HSP90AB2PQ58FF8 381 aa20.94■□□□□ 0.94
SREBF2-201ENST00000361204 TOP1P11387 765 aaKnown RBP20.94■□□□□ 0.94
SREBF2-201ENST00000361204 LRRFIP2Q9Y608 721 aaKnown RBP20.94■□□□□ 0.94
SREBF2-201ENST00000361204 SEC24BO95487 1268 aa20.93■□□□□ 0.94
SREBF2-201ENST00000361204 GJB2P29033 226 aa20.93■□□□□ 0.94
SREBF2-201ENST00000361204 BMS1Q14692 1282 aaKnown RBP20.93■□□□□ 0.94
SREBF2-201ENST00000361204 ZNF530Q6P9A1 599 aaPredicted RBP20.93■□□□□ 0.94
SREBF2-201ENST00000361204 LARP6Q9BRS8 491 aaKnown RBP20.93■□□□□ 0.94
SREBF2-201ENST00000361204 TFIP11Q9UBB9 837 aaKnown RBP20.93■□□□□ 0.94
SREBF2-201ENST00000361204 CCDC69A6NI79 296 aa20.93■□□□□ 0.94
SREBF2-201ENST00000361204 CAVIN2O95810 425 aa20.93■□□□□ 0.94
SREBF2-201ENST00000361204 TXLNBQ8N3L3 684 aa20.93■□□□□ 0.94
SREBF2-201ENST00000361204 TCEAL9Q9UHQ7 104 aa20.93■□□□□ 0.94
SREBF2-201ENST00000361204 MTMR7Q9Y216 660 aa20.93■□□□□ 0.94
SREBF2-201ENST00000361204 GIMAP6Q6P9H5 292 aa20.93■□□□□ 0.94
SREBF2-201ENST00000361204 F6X3S4 739 aa20.92■□□□□ 0.94
SREBF2-201ENST00000361204 ERLIN2O94905 339 aa20.92■□□□□ 0.94
SREBF2-201ENST00000361204 CASQ1P31415 396 aa20.92■□□□□ 0.94
SREBF2-201ENST00000361204 TRIM34Q9BYJ4 488 aa20.92■□□□□ 0.94
SREBF2-201ENST00000361204 JAKMIP3Q5VZ66 844 aa20.92■□□□□ 0.94
SREBF2-201ENST00000361204 CEP135Q66GS9 1140 aa20.92■□□□□ 0.94
SREBF2-201ENST00000361204 CDK5RAP3Q96JB5 506 aa20.92■□□□□ 0.94
SREBF2-201ENST00000361204 IL16Q14005 1332 aa20.92■□□□□ 0.94
SREBF2-201ENST00000361204 SYTL4Q96C24 671 aaPredicted RBP20.92■□□□□ 0.94
SREBF2-201ENST00000361204 KIF5CO60282 957 aa20.91■□□□□ 0.94
SREBF2-201ENST00000361204 KIF4BQ2VIQ3 1234 aa20.91■□□□□ 0.94
SREBF2-201ENST00000361204 KRT222Q8N1A0 295 aa20.91■□□□□ 0.94
SREBF2-201ENST00000361204 CCDC148Q8NFR7 591 aa20.91■□□□□ 0.94
SREBF2-201ENST00000361204 RBM42Q9BTD8 480 aaKnown RBP20.91■□□□□ 0.94
SREBF2-201ENST00000361204 CENPHQ9H3R5 247 aa20.91■□□□□ 0.94
SREBF2-201ENST00000361204 FKBP4Q02790 459 aaKnown RBP eCLIP20.91■□□□□ 0.943e-6■■■□□ 15
SREBF2-201ENST00000361204 NOL7Q9UMY1 257 aaKnown RBP20.91■□□□□ 0.94
SREBF2-201ENST00000361204 SNW1Q13573 536 aaKnown RBP20.91■□□□□ 0.94
SREBF2-201ENST00000361204 NACAP1Q9BZK3 213 aa20.9■□□□□ 0.94
SREBF2-201ENST00000361204 STX1AQ16623 288 aa20.9■□□□□ 0.94
SREBF2-201ENST00000361204 CCAR1Q8IX12 1150 aaKnown RBP20.9■□□□□ 0.94
SREBF2-201ENST00000361204 SDSP20132 328 aa20.9■□□□□ 0.94
SREBF2-201ENST00000361204 SCAF11Q99590 1463 aaKnown RBP20.9■□□□□ 0.94
SREBF2-201ENST00000361204 PTPRCP08575 1304 aa20.9■□□□□ 0.94
SREBF2-201ENST00000361204 TTC12Q9H892 705 aaPredicted RBP20.9■□□□□ 0.94
SREBF2-201ENST00000361204 U3KPZ7 1027 aaPredicted RBP20.89■□□□□ 0.94
SREBF2-201ENST00000361204 ZSCAN22P10073 491 aaPredicted RBP20.89■□□□□ 0.93
SREBF2-201ENST00000361204 GOLGA6L7A0A1B0GV03 622 aa20.89■□□□□ 0.93
SREBF2-201ENST00000361204 ODF2Q5BJF6 829 aa20.89■□□□□ 0.93
SREBF2-201ENST00000361204 KIAA1328Q86T90 577 aa20.89■□□□□ 0.93
SREBF2-201ENST00000361204 BOLA2Q9H3K6 86 aa20.89■□□□□ 0.93
SREBF2-201ENST00000361204 SPG7Q9UQ90 795 aa20.89■□□□□ 0.93
SREBF2-201ENST00000361204 ZSCAN25Q6NSZ9 544 aa20.89■□□□□ 0.93
SREBF2-201ENST00000361204 NUP133Q8WUM0 1156 aa20.89■□□□□ 0.93
SREBF2-201ENST00000361204 CCDC43Q96MW1 224 aaKnown RBP20.89■□□□□ 0.93
SREBF2-201ENST00000361204 FSIP1Q8NA03 581 aa20.88■□□□□ 0.93
SREBF2-201ENST00000361204 ARHGAP45Q92619 1136 aa20.88■□□□□ 0.93
SREBF2-201ENST00000361204 MAP9Q49MG5 647 aa20.88■□□□□ 0.93
SREBF2-201ENST00000361204 TIGD1Q96MW7 591 aa20.88■□□□□ 0.93
SREBF2-201ENST00000361204 CNNM1Q9NRU3 951 aa20.88■□□□□ 0.93
SREBF2-201ENST00000361204 TMC6Q7Z403 805 aa20.88■□□□□ 0.93
SREBF2-201ENST00000361204 CCDC94Q9BW85 323 aaPredicted RBP20.88■□□□□ 0.93
SREBF2-201ENST00000361204 GNAT3A8MTJ3 354 aa20.87■□□□□ 0.93
SREBF2-201ENST00000361204 PTPRKQ15262 1439 aa20.87■□□□□ 0.93
SREBF2-201ENST00000361204 CCDC171Q6TFL3 1326 aa20.87■□□□□ 0.93
SREBF2-201ENST00000361204 SHTN1A0MZ66 631 aa20.87■□□□□ 0.93
SREBF2-201ENST00000361204 MYL6BP14649 208 aa20.87■□□□□ 0.93
SREBF2-201ENST00000361204 IMMTQ16891 758 aaKnown RBP20.87■□□□□ 0.93
SREBF2-201ENST00000361204 USP48Q86UV5 1035 aa20.87■□□□□ 0.93
SREBF2-201ENST00000361204 CEP126Q9P2H0 1117 aa20.87■□□□□ 0.93
SREBF2-201ENST00000361204 WASF1Q92558 559 aa20.87■□□□□ 0.93
SREBF2-201ENST00000361204 C8orf76Q96K31 380 aa20.87■□□□□ 0.93
SREBF2-201ENST00000361204 CCDC186Q7Z3E2 898 aa20.86■□□□□ 0.93
SREBF2-201ENST00000361204 FAM200AQ8TCP9 573 aa20.86■□□□□ 0.93
SREBF2-201ENST00000361204 CCDC61Q9Y6R9 512 aa20.86■□□□□ 0.93
SREBF2-201ENST00000361204 RALGAPBQ86X10 1494 aa20.86■□□□□ 0.93
SREBF2-201ENST00000361204 EIF5P55010 431 aaKnown RBP20.86■□□□□ 0.93
SREBF2-201ENST00000361204 SLC3A2P08195 630 aaKnown RBP20.86■□□□□ 0.93
SREBF2-201ENST00000361204 GUCY1B3Q02153 619 aa20.86■□□□□ 0.93
SREBF2-201ENST00000361204 PRM3Q9NNZ6 103 aa20.86■□□□□ 0.93
SREBF2-201ENST00000361204 HMGB1P09429 215 aaKnown RBP20.85■□□□□ 0.93
SREBF2-201ENST00000361204 BTBD11A6QL63 1104 aa20.85■□□□□ 0.93
SREBF2-201ENST00000361204 ZFYVE27Q5T4F4 411 aa20.85■□□□□ 0.93
SREBF2-201ENST00000361204 GTPBP4Q9BZE4 634 aaKnown RBP20.85■□□□□ 0.93
SREBF2-201ENST00000361204 TANGO6Q9C0B7 1094 aa20.85■□□□□ 0.93
SREBF2-201ENST00000361204 NSD2O96028 1365 aa20.85■□□□□ 0.93
SREBF2-201ENST00000361204 ARHGEF11O15085 1522 aa20.85■□□□□ 0.93
SREBF2-201ENST00000361204 RLBP1P12271 317 aa20.84■□□□□ 0.93
SREBF2-201ENST00000361204 CNPY2Q9Y2B0 182 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 184.9 ms