RNA–Protein interactions for RNA: ENST00000358066.8

SEMA6D-204, Transcript of semaphorin 6D, humanhuman

TSL 1 (best) BASIC

Gene SEMA6D, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6D-204ENST00000358066 PLEKHH1Q9ULM0 1364 aa12.96□□□□□ -0.33
SEMA6D-204ENST00000358066 BCAR3O75815 825 aa12.96□□□□□ -0.33
SEMA6D-204ENST00000358066 YEATS4O95619 227 aa12.96□□□□□ -0.33
SEMA6D-204ENST00000358066 CCDC175P0C221 793 aa12.96□□□□□ -0.33
SEMA6D-204ENST00000358066 CTR9Q6PD62 1173 aa12.96□□□□□ -0.33
SEMA6D-204ENST00000358066 POLR3GO15318 223 aaPredicted RBP12.96□□□□□ -0.33
SEMA6D-204ENST00000358066 C6orf163Q5TEZ5 329 aa12.96□□□□□ -0.33
SEMA6D-204ENST00000358066 AIDAQ96BJ3 306 aa12.96□□□□□ -0.33
SEMA6D-204ENST00000358066 STRN4Q9NRL3 753 aa12.96□□□□□ -0.33
SEMA6D-204ENST00000358066 MCM4P33991 863 aa12.96□□□□□ -0.34
SEMA6D-204ENST00000358066 CFAP57Q96MR6 1250 aa12.95□□□□□ -0.34
SEMA6D-204ENST00000358066 NAA15Q9BXJ9 866 aaKnown RBP12.95□□□□□ -0.34
SEMA6D-204ENST00000358066 UBA5Q9GZZ9 404 aa12.95□□□□□ -0.34
SEMA6D-204ENST00000358066 SPECC1LQ69YQ0 1117 aa12.95□□□□□ -0.34
SEMA6D-204ENST00000358066 TSNARE1Q96NA8 513 aa12.95□□□□□ -0.34
SEMA6D-204ENST00000358066 BACH2Q9BYV9 841 aa12.95□□□□□ -0.34
SEMA6D-204ENST00000358066 LRP2BPQ9P2M1 347 aa12.95□□□□□ -0.34
SEMA6D-204ENST00000358066 PAFAH1B1P43034 410 aa12.95□□□□□ -0.34
SEMA6D-204ENST00000358066 CTNNA2P26232 953 aa12.94□□□□□ -0.34
SEMA6D-204ENST00000358066 ZNF428Q96B54 188 aa12.94□□□□□ -0.34
SEMA6D-204ENST00000358066 WDR63Q8IWG1 891 aa12.94□□□□□ -0.34
SEMA6D-204ENST00000358066 ZNF287Q9HBT7 754 aa12.94□□□□□ -0.34
SEMA6D-204ENST00000358066 COMMD10Q9Y6G5 202 aa12.94□□□□□ -0.34
SEMA6D-204ENST00000358066 IGHMBP2P38935 993 aaKnown RBP12.94□□□□□ -0.34
SEMA6D-204ENST00000358066 EHMT1Q9H9B1 1298 aa12.94□□□□□ -0.34
SEMA6D-204ENST00000358066 DNA2P51530 1060 aa12.94□□□□□ -0.34
SEMA6D-204ENST00000358066 TMEM266Q2M3C6 531 aa12.94□□□□□ -0.34
SEMA6D-204ENST00000358066 HOMER2Q9NSB8 354 aa12.94□□□□□ -0.34
SEMA6D-204ENST00000358066 KLHL10Q6JEL2 608 aa12.93□□□□□ -0.34
SEMA6D-204ENST00000358066 AKNAQ7Z591 1439 aa12.93□□□□□ -0.34
SEMA6D-204ENST00000358066 MAATS1Q7Z4T9 603 aa12.93□□□□□ -0.34
SEMA6D-204ENST00000358066 SMARCC1Q92922 1105 aaPredicted RBP12.93□□□□□ -0.34
SEMA6D-204ENST00000358066 SRGAP3O43295 1099 aa12.93□□□□□ -0.34
SEMA6D-204ENST00000358066 PABPN1LA6NDY0 278 aaKnown RBP12.93□□□□□ -0.34
SEMA6D-204ENST00000358066 BTBD11A6QL63 1104 aa12.93□□□□□ -0.34
SEMA6D-204ENST00000358066 CUL5Q93034 780 aa12.93□□□□□ -0.34
SEMA6D-204ENST00000358066 TMEM132EQ6IEE7 984 aa12.92□□□□□ -0.34
SEMA6D-204ENST00000358066 NUTM1Q86Y26 1132 aa12.92□□□□□ -0.34
SEMA6D-204ENST00000358066 TNNT1P13805 278 aa12.92□□□□□ -0.34
SEMA6D-204ENST00000358066 SF3B2Q13435 895 aaKnown RBP12.92□□□□□ -0.34
SEMA6D-204ENST00000358066 ATF7IPQ6VMQ6 1270 aa12.92□□□□□ -0.34
SEMA6D-204ENST00000358066 PUS7Q96PZ0 661 aaKnown RBP12.92□□□□□ -0.34
SEMA6D-204ENST00000358066 CTAGE5O15320 804 aa12.92□□□□□ -0.34
SEMA6D-204ENST00000358066 ARHGAP5Q13017 1502 aa12.92□□□□□ -0.34
SEMA6D-204ENST00000358066 NEMFO60524 1076 aa12.92□□□□□ -0.34
SEMA6D-204ENST00000358066 SSRP1Q08945 709 aaKnown RBP12.92□□□□□ -0.34
SEMA6D-204ENST00000358066 TDRD12Q587J7 1177 aaKnown RBP12.92□□□□□ -0.34
SEMA6D-204ENST00000358066 KIF20AO95235 890 aa12.92□□□□□ -0.34
SEMA6D-204ENST00000358066 GTF2F1P35269 517 aaKnown RBP eCLIP12.92□□□□□ -0.34
SEMA6D-204ENST00000358066 HSF2BPO75031 334 aa12.91□□□□□ -0.34
SEMA6D-204ENST00000358066 IDH1O75874 414 aaKnown RBP12.91□□□□□ -0.34
SEMA6D-204ENST00000358066 CEP112Q8N8E3 955 aa12.91□□□□□ -0.34
SEMA6D-204ENST00000358066 POLR3DP05423 398 aaPredicted RBP12.91□□□□□ -0.34
SEMA6D-204ENST00000358066 AEBP2Q6ZN18 517 aaPredicted RBP12.91□□□□□ -0.34
SEMA6D-204ENST00000358066 TMOD2Q9NZR1 351 aa12.91□□□□□ -0.34
SEMA6D-204ENST00000358066 FGD6Q6ZV73 1430 aa12.91□□□□□ -0.34
SEMA6D-204ENST00000358066 MACROD2A1Z1Q3 448 aa12.9□□□□□ -0.34
SEMA6D-204ENST00000358066 TMCO5BA8MYB1 307 aa12.9□□□□□ -0.34
SEMA6D-204ENST00000358066 FSD2A1L4K1 749 aa12.9□□□□□ -0.34
SEMA6D-204ENST00000358066 GSDMDP57764 484 aa12.9□□□□□ -0.34
SEMA6D-204ENST00000358066 HLTFQ14527 1009 aaKnown RBP eCLIP12.9□□□□□ -0.34
SEMA6D-204ENST00000358066 RAB34Q9BZG1 259 aa12.9□□□□□ -0.34
SEMA6D-204ENST00000358066 U3KPZ7 1027 aaPredicted RBP12.9□□□□□ -0.34
SEMA6D-204ENST00000358066 RAB11FIP3O75154 756 aa12.9□□□□□ -0.34
SEMA6D-204ENST00000358066 ZNF530Q6P9A1 599 aaPredicted RBP12.9□□□□□ -0.34
SEMA6D-204ENST00000358066 FAM114A1Q8IWE2 563 aa12.9□□□□□ -0.34
SEMA6D-204ENST00000358066 CEP126Q9P2H0 1117 aa12.9□□□□□ -0.34
SEMA6D-204ENST00000358066 SULT6B1Q6IMI4 303 aa12.9□□□□□ -0.34
SEMA6D-204ENST00000358066 PRPF40BQ6NWY9 871 aaKnown RBP12.9□□□□□ -0.34
SEMA6D-204ENST00000358066 AKAP2Q9Y2D5 859 aa12.9□□□□□ -0.34
SEMA6D-204ENST00000358066 ANKRD30BQ9BXX2 1392 aa12.9□□□□□ -0.34
SEMA6D-204ENST00000358066 PPP4R3BQ5MIZ7 849 aa12.9□□□□□ -0.34
SEMA6D-204ENST00000358066 DDX54Q8TDD1 881 aaKnown RBP12.9□□□□□ -0.34
SEMA6D-204ENST00000358066 PRKCSHP14314 528 aaPredicted RBP12.89□□□□□ -0.35
SEMA6D-204ENST00000358066 BMS1Q14692 1282 aaKnown RBP12.89□□□□□ -0.35
SEMA6D-204ENST00000358066 TOM1L2Q6ZVM7 507 aa12.89□□□□□ -0.35
SEMA6D-204ENST00000358066 SREK1Q8WXA9 508 aaKnown RBP12.89□□□□□ -0.35
SEMA6D-204ENST00000358066 STX1AQ16623 288 aa12.89□□□□□ -0.35
SEMA6D-204ENST00000358066 CPLX3Q8WVH0 158 aa12.89□□□□□ -0.35
SEMA6D-204ENST00000358066 DDX12PQ92771 950 aa12.89□□□□□ -0.35
SEMA6D-204ENST00000358066 SPECC1Q5M775 1068 aa12.89□□□□□ -0.35
SEMA6D-204ENST00000358066 LMAN1P49257 510 aa12.89□□□□□ -0.35
SEMA6D-204ENST00000358066 TMC6Q7Z403 805 aa12.89□□□□□ -0.35
SEMA6D-204ENST00000358066 DAAM2Q86T65 1068 aa12.89□□□□□ -0.35
SEMA6D-204ENST00000358066 CNNM3Q8NE01 707 aa12.89□□□□□ -0.35
SEMA6D-204ENST00000358066 SCAND2PQ9GZW5 306 aaPredicted RBP12.89□□□□□ -0.35
SEMA6D-204ENST00000358066 A0A087WZG4 1122 aa12.89□□□□□ -0.35
SEMA6D-204ENST00000358066 CRACR2BQ8N4Y2 399 aaPredicted RBP12.89□□□□□ -0.35
SEMA6D-204ENST00000358066 BBXQ8WY36 941 aaPredicted RBP12.89□□□□□ -0.35
SEMA6D-204ENST00000358066 NSRP1Q9H0G5 558 aaKnown RBP12.89□□□□□ -0.35
SEMA6D-204ENST00000358066 IL1RAPL2Q9NP60 686 aa12.89□□□□□ -0.35
SEMA6D-204ENST00000358066 SH2B1Q9NRF2 756 aaPredicted RBP12.89□□□□□ -0.35
SEMA6D-204ENST00000358066 GOLGA6L9A6NEM1 432 aa12.88□□□□□ -0.35
SEMA6D-204ENST00000358066 BAG4O95429 457 aaKnown RBP12.88□□□□□ -0.35
SEMA6D-204ENST00000358066 C8orf76Q96K31 380 aa12.88□□□□□ -0.35
SEMA6D-204ENST00000358066 FERMT1Q9BQL6 677 aa12.88□□□□□ -0.35
SEMA6D-204ENST00000358066 TRMT1Q9NXH9 659 aaKnown RBP12.88□□□□□ -0.35
SEMA6D-204ENST00000358066 IPO4Q8TEX9 1081 aaKnown RBP12.88□□□□□ -0.35
SEMA6D-204ENST00000358066 CCDC196A0A1B0GTZ2 297 aa12.88□□□□□ -0.35
SEMA6D-204ENST00000358066 HMGB1P09429 215 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms