RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 STK11IPQ8N1F8 1099 aa18.33■□□□□ 0.52
TRAPPC11-202ENST00000357207 ZMYND15Q9H091 742 aa18.33■□□□□ 0.52
TRAPPC11-202ENST00000357207 TATP17735 454 aaPredicted RBP18.32■□□□□ 0.52
TRAPPC11-202ENST00000357207 HCLS1P14317 486 aaPredicted RBP18.32■□□□□ 0.52
TRAPPC11-202ENST00000357207 UBE2HP62256 183 aa18.32■□□□□ 0.52
TRAPPC11-202ENST00000357207 SKIDA1Q1XH10 827 aa18.32■□□□□ 0.52
TRAPPC11-202ENST00000357207 TAF3Q5VWG9 929 aa18.32■□□□□ 0.52
TRAPPC11-202ENST00000357207 LARP6Q9BRS8 491 aaKnown RBP18.32■□□□□ 0.52
TRAPPC11-202ENST00000357207 BOLA2Q9H3K6 86 aa18.32■□□□□ 0.52
TRAPPC11-202ENST00000357207 RLBP1P12271 317 aa18.32■□□□□ 0.52
TRAPPC11-202ENST00000357207 EPS15P42566 896 aa18.32■□□□□ 0.52
TRAPPC11-202ENST00000357207 CNNM1Q9NRU3 951 aa18.32■□□□□ 0.52
TRAPPC11-202ENST00000357207 SDSP20132 328 aa18.31■□□□□ 0.52
TRAPPC11-202ENST00000357207 RBM42Q9BTD8 480 aaKnown RBP18.31■□□□□ 0.52
TRAPPC11-202ENST00000357207 MBIPQ9NS73 344 aa18.31■□□□□ 0.52
TRAPPC11-202ENST00000357207 TFIP11Q9UBB9 837 aaKnown RBP18.31■□□□□ 0.52
TRAPPC11-202ENST00000357207 MTMR7Q9Y216 660 aa18.31■□□□□ 0.52
TRAPPC11-202ENST00000357207 SMC5Q8IY18 1101 aa18.31■□□□□ 0.52
TRAPPC11-202ENST00000357207 TSPYL1Q9H0U9 437 aa18.31■□□□□ 0.52
TRAPPC11-202ENST00000357207 TAF7Q15545 349 aaPredicted RBP18.31■□□□□ 0.52
TRAPPC11-202ENST00000357207 TNNQ9UQP3 1299 aa18.31■□□□□ 0.52
TRAPPC11-202ENST00000357207 BIVM-ERCC5R4GMW8 1640 aa18.3■□□□□ 0.52
TRAPPC11-202ENST00000357207 CTAGE5O15320 804 aa18.3■□□□□ 0.52
TRAPPC11-202ENST00000357207 NACAP1Q9BZK3 213 aa18.3■□□□□ 0.52
TRAPPC11-202ENST00000357207 NEMFO60524 1076 aa18.3■□□□□ 0.52
TRAPPC11-202ENST00000357207 TESK2Q96S53 571 aa18.3■□□□□ 0.52
TRAPPC11-202ENST00000357207 SPG7Q9UQ90 795 aa18.3■□□□□ 0.52
TRAPPC11-202ENST00000357207 ZKSCAN5Q9Y2L8 839 aa18.3■□□□□ 0.52
TRAPPC11-202ENST00000357207 RNF123Q5XPI4 1314 aa18.29■□□□□ 0.52
TRAPPC11-202ENST00000357207 PER1O15534 1290 aaPredicted RBP18.29■□□□□ 0.52
TRAPPC11-202ENST00000357207 ZNF165P49910 485 aa18.29■□□□□ 0.52
TRAPPC11-202ENST00000357207 FLIIQ13045 1269 aa18.29■□□□□ 0.52
TRAPPC11-202ENST00000357207 U3KPZ7 1027 aaPredicted RBP18.29■□□□□ 0.52
TRAPPC11-202ENST00000357207 CCDC69A6NI79 296 aa18.29■□□□□ 0.52
TRAPPC11-202ENST00000357207 RAB3GAP1Q15042 981 aa18.29■□□□□ 0.52
TRAPPC11-202ENST00000357207 CCDC57Q2TAC2 916 aa18.29■□□□□ 0.52
TRAPPC11-202ENST00000357207 SLC26A8Q96RN1 970 aa18.29■□□□□ 0.52
TRAPPC11-202ENST00000357207 CGNQ9P2M7 1197 aaKnown RBP18.29■□□□□ 0.52
TRAPPC11-202ENST00000357207 ATF3P18847 181 aa18.29■□□□□ 0.52
TRAPPC11-202ENST00000357207 ZSCAN25Q6NSZ9 544 aa18.29■□□□□ 0.52
TRAPPC11-202ENST00000357207 C14orf93Q9H972 538 aaKnown RBP18.29■□□□□ 0.52
TRAPPC11-202ENST00000357207 URI1O94763 535 aaPredicted RBP18.28■□□□□ 0.52
TRAPPC11-202ENST00000357207 ARHGAP29Q52LW3 1261 aa18.28■□□□□ 0.52
TRAPPC11-202ENST00000357207 ASXL1Q8IXJ9 1541 aa18.28■□□□□ 0.52
TRAPPC11-202ENST00000357207 GJB2P29033 226 aa18.28■□□□□ 0.52
TRAPPC11-202ENST00000357207 STIM1Q13586 685 aa18.28■□□□□ 0.52
TRAPPC11-202ENST00000357207 PPP4R3BQ5MIZ7 849 aa18.28■□□□□ 0.52
TRAPPC11-202ENST00000357207 ZSCAN12O43309 604 aa18.28■□□□□ 0.52
TRAPPC11-202ENST00000357207 RDXP35241 583 aaKnown RBP18.28■□□□□ 0.52
TRAPPC11-202ENST00000357207 TRMT1Q9NXH9 659 aaKnown RBP18.27■□□□□ 0.52
TRAPPC11-202ENST00000357207 TSHZ3Q63HK5 1081 aa18.27■□□□□ 0.52
TRAPPC11-202ENST00000357207 KIF6Q6ZMV9 814 aa18.27■□□□□ 0.52
TRAPPC11-202ENST00000357207 TRIM34Q9BYJ4 488 aa18.27■□□□□ 0.52
TRAPPC11-202ENST00000357207 CC2D2AQ9P2K1 1620 aa18.27■□□□□ 0.52
TRAPPC11-202ENST00000357207 ECHDC1Q9NTX5 307 aa18.27■□□□□ 0.51
TRAPPC11-202ENST00000357207 EPB41L2O43491 1005 aaKnown RBP18.26■□□□□ 0.51
TRAPPC11-202ENST00000357207 IMMTQ16891 758 aaKnown RBP18.26■□□□□ 0.51
TRAPPC11-202ENST00000357207 NUP133Q8WUM0 1156 aa18.26■□□□□ 0.51
TRAPPC11-202ENST00000357207 DNAAF4Q8WXU2 420 aa18.26■□□□□ 0.51
TRAPPC11-202ENST00000357207 UGGT2Q9NYU1 1516 aa18.26■□□□□ 0.51
TRAPPC11-202ENST00000357207 GPATCH8Q9UKJ3 1502 aaKnown RBP18.26■□□□□ 0.51
TRAPPC11-202ENST00000357207 FAM177BA6PVY3 158 aa18.26■□□□□ 0.51
TRAPPC11-202ENST00000357207 CT47A1Q5JQC4 288 aaPredicted RBP18.26■□□□□ 0.51
TRAPPC11-202ENST00000357207 GIMAP6Q6P9H5 292 aa18.26■□□□□ 0.51
TRAPPC11-202ENST00000357207 CCDC8Q9H0W5 538 aaPredicted RBP18.26■□□□□ 0.51
TRAPPC11-202ENST00000357207 PRIM1P49642 420 aaKnown RBP18.26■□□□□ 0.51
TRAPPC11-202ENST00000357207 NOLC1Q14978 699 aaKnown RBP eCLIP18.26■□□□□ 0.51
TRAPPC11-202ENST00000357207 ANKRD44Q8N8A2 993 aa18.26■□□□□ 0.51
TRAPPC11-202ENST00000357207 CCDC102AQ96A19 550 aa18.26■□□□□ 0.51
TRAPPC11-202ENST00000357207 TCEAL9Q9UHQ7 104 aa18.26■□□□□ 0.51
TRAPPC11-202ENST00000357207 NOL7Q9UMY1 257 aaKnown RBP18.26■□□□□ 0.51
TRAPPC11-202ENST00000357207 PRAG1Q86YV5 1406 aa18.26■□□□□ 0.51
TRAPPC11-202ENST00000357207 POLR3AO14802 1390 aaPredicted RBP18.25■□□□□ 0.51
TRAPPC11-202ENST00000357207 CAVIN2O95810 425 aa18.25■□□□□ 0.51
TRAPPC11-202ENST00000357207 CABP4P57796 275 aa18.25■□□□□ 0.51
TRAPPC11-202ENST00000357207 HS1BP3Q53T59 392 aa18.25■□□□□ 0.51
TRAPPC11-202ENST00000357207 KIF14Q15058 1648 aa18.25■□□□□ 0.51
TRAPPC11-202ENST00000357207 FAM83GA6ND36 823 aa18.25■□□□□ 0.51
TRAPPC11-202ENST00000357207 SLC3A2P08195 630 aaKnown RBP18.25■□□□□ 0.51
TRAPPC11-202ENST00000357207 CDK5RAP3Q96JB5 506 aa18.25■□□□□ 0.51
TRAPPC11-202ENST00000357207 THOC2Q8NI27 1593 aaKnown RBP18.25■□□□□ 0.51
TRAPPC11-202ENST00000357207 ZSCAN22P10073 491 aaPredicted RBP18.24■□□□□ 0.51
TRAPPC11-202ENST00000357207 DEF6Q9H4E7 631 aa18.24■□□□□ 0.51
TRAPPC11-202ENST00000357207 PDE1AP54750 535 aa18.24■□□□□ 0.51
TRAPPC11-202ENST00000357207 CCDC181Q5TID7 509 aa18.24■□□□□ 0.51
TRAPPC11-202ENST00000357207 LARP1Q6PKG0 1096 aaKnown RBP18.24■□□□□ 0.51
TRAPPC11-202ENST00000357207 RBM33Q96EV2 1170 aaKnown RBP18.24■□□□□ 0.51
TRAPPC11-202ENST00000357207 C8orf76Q96K31 380 aa18.24■□□□□ 0.51
TRAPPC11-202ENST00000357207 MEIS3Q99687 375 aa18.24■□□□□ 0.51
TRAPPC11-202ENST00000357207 LUC7LQ9NQ29 371 aaKnown RBP18.24■□□□□ 0.51
TRAPPC11-202ENST00000357207 HMGB1P09429 215 aaKnown RBP18.24■□□□□ 0.51
TRAPPC11-202ENST00000357207 GUCY1B3Q02153 619 aa18.24■□□□□ 0.51
TRAPPC11-202ENST00000357207 ZNF830Q96NB3 372 aaPredicted RBP18.24■□□□□ 0.51
TRAPPC11-202ENST00000357207 MYO6Q9UM54 1294 aa18.24■□□□□ 0.51
TRAPPC11-202ENST00000357207 GSDMDP57764 484 aa18.24■□□□□ 0.51
TRAPPC11-202ENST00000357207 ANAPC15P60006 121 aa18.24■□□□□ 0.51
TRAPPC11-202ENST00000357207 NOS1P29475 1434 aa18.23■□□□□ 0.51
TRAPPC11-202ENST00000357207 FAM135AQ9P2D6 1515 aa18.23■□□□□ 0.51
TRAPPC11-202ENST00000357207 PEG3Q9GZU2 1588 aa18.23■□□□□ 0.51
TRAPPC11-202ENST00000357207 IDI1Q13907 227 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms