RNA–Protein interactions for RNA: ENST00000344622.8

GDNF-202, Transcript of glial cell derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene GDNF, Length 3,655 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDNF-202ENST00000344622 ZCRB1Q8TBF4 217 aaKnown RBP9.58□□□□□ -0.88
GDNF-202ENST00000344622 GJD4Q96KN9 370 aaPredicted RBP9.58□□□□□ -0.88
GDNF-202ENST00000344622 RNF123Q5XPI4 1314 aa9.57□□□□□ -0.88
GDNF-202ENST00000344622 TJP1Q07157 1748 aa9.57□□□□□ -0.88
GDNF-202ENST00000344622 RLBP1P12271 317 aa9.57□□□□□ -0.88
GDNF-202ENST00000344622 AMIGO3Q86WK7 504 aa9.57□□□□□ -0.88
GDNF-202ENST00000344622 VAMP4O75379 141 aa9.57□□□□□ -0.88
GDNF-202ENST00000344622 RAPGEF4Q8WZA2 1011 aa9.57□□□□□ -0.88
GDNF-202ENST00000344622 ACSBG1Q96GR2 724 aa9.57□□□□□ -0.88
GDNF-202ENST00000344622 HEG1Q9ULI3 1381 aa9.57□□□□□ -0.88
GDNF-202ENST00000344622 NECTIN2Q92692 538 aa9.57□□□□□ -0.88
GDNF-202ENST00000344622 ASAP1Q9ULH1 1129 aa9.57□□□□□ -0.88
GDNF-202ENST00000344622 ANXA1P04083 346 aa9.56□□□□□ -0.88
GDNF-202ENST00000344622 PIGBQ92521 554 aa9.56□□□□□ -0.88
GDNF-202ENST00000344622 ONECUT3O60422 494 aaPredicted RBP9.56□□□□□ -0.88
GDNF-202ENST00000344622 NKX1-1Q15270 411 aaPredicted RBP9.56□□□□□ -0.88
GDNF-202ENST00000344622 PROSER3Q2NL68 480 aa9.56□□□□□ -0.88
GDNF-202ENST00000344622 ZNF428Q96B54 188 aa9.56□□□□□ -0.88
GDNF-202ENST00000344622 QTRT2Q9H974 415 aaKnown RBP9.56□□□□□ -0.88
GDNF-202ENST00000344622 RGS12O14924 1447 aa9.56□□□□□ -0.88
GDNF-202ENST00000344622 TATP17735 454 aaPredicted RBP9.55□□□□□ -0.88
GDNF-202ENST00000344622 RARSP54136 660 aaKnown RBP9.55□□□□□ -0.88
GDNF-202ENST00000344622 G2E3Q7L622 706 aa9.55□□□□□ -0.88
GDNF-202ENST00000344622 SSH1Q8WYL5 1049 aa9.55□□□□□ -0.88
GDNF-202ENST00000344622 SLC52A2Q9HAB3 445 aa9.55□□□□□ -0.88
GDNF-202ENST00000344622 CCDC9Q9Y3X0 531 aaKnown RBP9.55□□□□□ -0.88
GDNF-202ENST00000344622 E9PSI1 815 aa9.55□□□□□ -0.88
GDNF-202ENST00000344622 BARGINQ6ZT62 677 aa9.55□□□□□ -0.88
GDNF-202ENST00000344622 GAS2L2Q8NHY3 880 aa9.54□□□□□ -0.88
GDNF-202ENST00000344622 IFT57Q9NWB7 429 aa9.54□□□□□ -0.88
GDNF-202ENST00000344622 EIF4A1P60842 406 aaKnown RBP9.54□□□□□ -0.88
GDNF-202ENST00000344622 PLEKHO1Q53GL0 409 aaPredicted RBP9.54□□□□□ -0.88
GDNF-202ENST00000344622 TAF1LQ8IZX4 1826 aa9.54□□□□□ -0.88
GDNF-202ENST00000344622 BCL9O00512 1426 aa9.54□□□□□ -0.88
GDNF-202ENST00000344622 LRP10Q7Z4F1 713 aa9.54□□□□□ -0.88
GDNF-202ENST00000344622 IFNL2Q8IZJ0 200 aa9.54□□□□□ -0.88
GDNF-202ENST00000344622 ZNF496Q96IT1 587 aaPredicted RBP9.54□□□□□ -0.88
GDNF-202ENST00000344622 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.54□□□□□ -0.88
GDNF-202ENST00000344622 PCDH11XQ9BZA7 1347 aa9.53□□□□□ -0.88
GDNF-202ENST00000344622 PCDH11YQ9BZA8 1340 aa9.53□□□□□ -0.88
GDNF-202ENST00000344622 COL5A3P25940 1745 aaPredicted RBP9.53□□□□□ -0.88
GDNF-202ENST00000344622 MEX3CQ5U5Q3 659 aaKnown RBP9.53□□□□□ -0.88
GDNF-202ENST00000344622 NHSQ6T4R5 1651 aa9.53□□□□□ -0.88
GDNF-202ENST00000344622 PRIM1P49642 420 aaKnown RBP9.53□□□□□ -0.88
GDNF-202ENST00000344622 PDIA6Q15084 440 aa9.53□□□□□ -0.88
GDNF-202ENST00000344622 AMOTQ4VCS5 1084 aa9.53□□□□□ -0.88
GDNF-202ENST00000344622 RCAN3Q9UKA8 241 aa9.53□□□□□ -0.88
GDNF-202ENST00000344622 USP16Q9Y5T5 823 aa9.53□□□□□ -0.88
GDNF-202ENST00000344622 NCBP3Q53F19 620 aaKnown RBP9.53□□□□□ -0.88
GDNF-202ENST00000344622 LY75O60449 1722 aa9.52□□□□□ -0.88
GDNF-202ENST00000344622 SEPT12Q8IYM1 358 aa9.52□□□□□ -0.88
GDNF-202ENST00000344622 LAMB4A4D0S4 1761 aa9.52□□□□□ -0.89
GDNF-202ENST00000344622 IL16Q14005 1332 aa9.52□□□□□ -0.89
GDNF-202ENST00000344622 BTBD11A6QL63 1104 aa9.52□□□□□ -0.89
GDNF-202ENST00000344622 DDB1Q16531 1140 aa9.52□□□□□ -0.89
GDNF-202ENST00000344622 ZNF790Q6PG37 636 aa9.52□□□□□ -0.89
GDNF-202ENST00000344622 ATG3Q9NT62 314 aa9.52□□□□□ -0.89
GDNF-202ENST00000344622 TSPYL4Q9UJ04 414 aa9.52□□□□□ -0.89
GDNF-202ENST00000344622 TAF7Q15545 349 aaPredicted RBP9.52□□□□□ -0.89
GDNF-202ENST00000344622 PHAXQ9H814 394 aaKnown RBP9.52□□□□□ -0.89
GDNF-202ENST00000344622 TNS1Q9HBL0 1735 aaKnown RBP9.52□□□□□ -0.89
GDNF-202ENST00000344622 CENPFP49454 3210 aa9.51□□□□□ -0.89
GDNF-202ENST00000344622 PDE3BQ13370 1112 aa9.51□□□□□ -0.89
GDNF-202ENST00000344622 DCAF5Q96JK2 942 aa9.51□□□□□ -0.89
GDNF-202ENST00000344622 SKAP1Q86WV1 359 aa9.51□□□□□ -0.89
GDNF-202ENST00000344622 SPG7Q9UQ90 795 aa9.51□□□□□ -0.89
GDNF-202ENST00000344622 TUBGCP6Q96RT7 1819 aa9.5□□□□□ -0.89
GDNF-202ENST00000344622 EXOC5O00471 708 aa9.5□□□□□ -0.89
GDNF-202ENST00000344622 PTCD1O75127 700 aaKnown RBP9.5□□□□□ -0.89
GDNF-202ENST00000344622 GIGYF1O75420 1035 aaPredicted RBP9.5□□□□□ -0.89
GDNF-202ENST00000344622 TWISTNBQ3B726 338 aaPredicted RBP9.5□□□□□ -0.89
GDNF-202ENST00000344622 C1orf141Q5JVX7 400 aa9.5□□□□□ -0.89
GDNF-202ENST00000344622 THRAP3Q9Y2W1 955 aaKnown RBP9.5□□□□□ -0.89
GDNF-202ENST00000344622 PANK1Q8TE04 598 aa9.5□□□□□ -0.89
GDNF-202ENST00000344622 HTATSF1O43719 755 aaKnown RBP9.5□□□□□ -0.89
GDNF-202ENST00000344622 NUP188Q5SRE5 1749 aa9.5□□□□□ -0.89
GDNF-202ENST00000344622 RTF1Q92541 710 aaKnown RBP9.5□□□□□ -0.89
GDNF-202ENST00000344622 NBPF26B4DH59 902 aa9.49□□□□□ -0.89
GDNF-202ENST00000344622 RRP1P56182 461 aaKnown RBP9.49□□□□□ -0.89
GDNF-202ENST00000344622 NBPF14Q5TI25 921 aa9.49□□□□□ -0.89
GDNF-202ENST00000344622 NBPF10Q6P3W6 841 aaKnown RBP9.49□□□□□ -0.89
GDNF-202ENST00000344622 NBPF15Q8N660 670 aa9.49□□□□□ -0.89
GDNF-202ENST00000344622 CLUAP1Q96AJ1 413 aa9.49□□□□□ -0.89
GDNF-202ENST00000344622 PROM2Q8N271 834 aa9.49□□□□□ -0.89
GDNF-202ENST00000344622 MRPL50Q8N5N7 158 aaKnown RBP9.49□□□□□ -0.89
GDNF-202ENST00000344622 SYTL4Q96C24 671 aaPredicted RBP9.49□□□□□ -0.89
GDNF-202ENST00000344622 PNNQ9H307 717 aaKnown RBP9.49□□□□□ -0.89
GDNF-202ENST00000344622 CACNA1FO60840 1977 aa9.49□□□□□ -0.89
GDNF-202ENST00000344622 TRIM27P14373 513 aa9.49□□□□□ -0.89
GDNF-202ENST00000344622 GNAI1P63096 354 aa9.49□□□□□ -0.89
GDNF-202ENST00000344622 LRRC4BQ9NT99 713 aa9.49□□□□□ -0.89
GDNF-202ENST00000344622 TRPC5Q9UL62 973 aaPredicted RBP9.49□□□□□ -0.89
GDNF-202ENST00000344622 NOB1Q9ULX3 412 aaKnown RBP9.49□□□□□ -0.89
GDNF-202ENST00000344622 ARFGEF2Q9Y6D5 1785 aa9.48□□□□□ -0.89
GDNF-202ENST00000344622 ITPK1Q13572 414 aa9.48□□□□□ -0.89
GDNF-202ENST00000344622 B4GALNT3Q6L9W6 998 aa9.48□□□□□ -0.89
GDNF-202ENST00000344622 EXOC6Q8TAG9 804 aa9.48□□□□□ -0.89
GDNF-202ENST00000344622 CHPF2Q9P2E5 772 aa9.48□□□□□ -0.89
GDNF-202ENST00000344622 CASZ1Q86V15 1759 aa9.48□□□□□ -0.89
GDNF-202ENST00000344622 N4BP2Q86UW6 1770 aaPredicted RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms