RNA–Protein interactions for RNA: ENST00000343256.9

MUC1-204, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-204ENST00000343256 ASAP1Q9ULH1 1129 aa24.95■■□□□ 1.58
MUC1-204ENST00000343256 PKD1L3Q7Z443 1732 aa24.95■■□□□ 1.58
MUC1-204ENST00000343256 C9orf131Q5VYM1 1079 aa24.94■■□□□ 1.58
MUC1-204ENST00000343256 C10orf71Q711Q0 1435 aa24.94■■□□□ 1.58
MUC1-204ENST00000343256 NKX1-1Q15270 411 aaPredicted RBP24.92■■□□□ 1.58
MUC1-204ENST00000343256 TESK2Q96S53 571 aa24.92■■□□□ 1.58
MUC1-204ENST00000343256 FLT4P35916 1363 aa24.92■■□□□ 1.58
MUC1-204ENST00000343256 TMOD3Q9NYL9 352 aa24.91■■□□□ 1.58
MUC1-204ENST00000343256 KCPQ6ZWJ8 1503 aa24.91■■□□□ 1.58
MUC1-204ENST00000343256 BRCA1P38398 1863 aaKnown RBP24.9■■□□□ 1.58
MUC1-204ENST00000343256 PRELPP51888 382 aa24.9■■□□□ 1.58
MUC1-204ENST00000343256 TMF1P82094 1093 aa24.89■■□□□ 1.58
MUC1-204ENST00000343256 FSTL1Q12841 308 aa24.89■■□□□ 1.58
MUC1-204ENST00000343256 ST20-MTHFSA0A0A6YYL1 179 aa24.88■■□□□ 1.57
MUC1-204ENST00000343256 TRAPPC3LQ5T215 181 aa24.88■■□□□ 1.57
MUC1-204ENST00000343256 CCDC87Q9NVE4 849 aa24.88■■□□□ 1.57
MUC1-204ENST00000343256 C4AP0C0L4 1744 aa24.87■■□□□ 1.57
MUC1-204ENST00000343256 NLGN1Q8N2Q7 840 aa24.87■■□□□ 1.57
MUC1-204ENST00000343256 RRAGCQ9HB90 399 aa24.87■■□□□ 1.57
MUC1-204ENST00000343256 ATG3Q9NT62 314 aa24.87■■□□□ 1.57
MUC1-204ENST00000343256 SPG7Q9UQ90 795 aa24.87■■□□□ 1.57
MUC1-204ENST00000343256 RTCBQ9Y3I0 505 aaKnown RBP24.87■■□□□ 1.57
MUC1-204ENST00000343256 PLEKHG2Q9H7P9 1386 aa24.87■■□□□ 1.57
MUC1-204ENST00000343256 KCNA3P22001 575 aa24.86■■□□□ 1.57
MUC1-204ENST00000343256 ARHGEF1Q92888 912 aaKnown RBP24.85■■□□□ 1.57
MUC1-204ENST00000343256 EMILIN1Q9Y6C2 1016 aa24.85■■□□□ 1.57
MUC1-204ENST00000343256 ARFGEF1Q9Y6D6 1849 aa24.84■■□□□ 1.57
MUC1-204ENST00000343256 RNF181Q9P0P0 153 aa24.84■■□□□ 1.57
MUC1-204ENST00000343256 PCNTO95613 3336 aa24.84■■□□□ 1.57
MUC1-204ENST00000343256 KIF20BQ96Q89 1820 aa24.84■■□□□ 1.57
MUC1-204ENST00000343256 KDM2BQ8NHM5 1336 aa24.84■■□□□ 1.57
MUC1-204ENST00000343256 GYS1P13807 737 aa24.83■■□□□ 1.57
MUC1-204ENST00000343256 SLC4A9Q96Q91 983 aa24.83■■□□□ 1.57
MUC1-204ENST00000343256 PARP3Q9Y6F1 533 aa24.83■■□□□ 1.57
MUC1-204ENST00000343256 NCAPD2Q15021 1401 aa24.82■■□□□ 1.56
MUC1-204ENST00000343256 KDRP35968 1356 aa24.81■■□□□ 1.56
MUC1-204ENST00000343256 KIF24Q5T7B8 1368 aa24.81■■□□□ 1.56
MUC1-204ENST00000343256 PPM1GO15355 546 aaPredicted RBP24.8■■□□□ 1.56
MUC1-204ENST00000343256 PHKG2P15735 406 aa24.8■■□□□ 1.56
MUC1-204ENST00000343256 DCAF5Q96JK2 942 aa24.8■■□□□ 1.56
MUC1-204ENST00000343256 RBM42Q9BTD8 480 aaKnown RBP24.8■■□□□ 1.56
MUC1-204ENST00000343256 PIM2Q9P1W9 311 aa24.8■■□□□ 1.56
MUC1-204ENST00000343256 RFC4P35249 363 aa24.79■■□□□ 1.56
MUC1-204ENST00000343256 IFNL2Q8IZJ0 200 aa24.79■■□□□ 1.56
MUC1-204ENST00000343256 TNRC6CQ9HCJ0 1690 aaKnown RBP24.78■■□□□ 1.56
MUC1-204ENST00000343256 HSPA1AP0DMV8 641 aaKnown RBP24.78■■□□□ 1.56
MUC1-204ENST00000343256 HSPA1BP0DMV9 641 aaKnown RBP24.78■■□□□ 1.56
MUC1-204ENST00000343256 SMC1BQ8NDV3 1235 aa24.78■■□□□ 1.56
MUC1-204ENST00000343256 EYA1Q99502 592 aa24.78■■□□□ 1.56
MUC1-204ENST00000343256 DALRD3Q5D0E6 543 aaKnown RBP24.77■■□□□ 1.56
MUC1-204ENST00000343256 ADRA2BP18089 450 aa24.76■■□□□ 1.55
MUC1-204ENST00000343256 SBF1O95248 1867 aa24.76■■□□□ 1.55
MUC1-204ENST00000343256 COL5A3P25940 1745 aaPredicted RBP24.75■■□□□ 1.55
MUC1-204ENST00000343256 RPS6KA4O75676 772 aa24.75■■□□□ 1.55
MUC1-204ENST00000343256 CHRNA5P30532 468 aa24.75■■□□□ 1.55
MUC1-204ENST00000343256 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.75■■□□□ 1.55
MUC1-204ENST00000343256 TONSLQ96HA7 1378 aa24.75■■□□□ 1.55
MUC1-204ENST00000343256 RC3H1Q5TC82 1133 aaKnown RBP24.74■■□□□ 1.55
MUC1-204ENST00000343256 CNTNAP4Q9C0A0 1308 aa24.74■■□□□ 1.55
MUC1-204ENST00000343256 MYH14Q7Z406 1995 aaKnown RBP24.73■■□□□ 1.55
MUC1-204ENST00000343256 SRP68Q9UHB9 627 aaKnown RBP24.73■■□□□ 1.55
MUC1-204ENST00000343256 RASSF7Q02833 373 aa24.72■■□□□ 1.55
MUC1-204ENST00000343256 DDR1Q08345 913 aa24.72■■□□□ 1.55
MUC1-204ENST00000343256 FKBP8Q14318 412 aa24.71■■□□□ 1.55
MUC1-204ENST00000343256 ZNF831Q5JPB2 1677 aa24.71■■□□□ 1.55
MUC1-204ENST00000343256 SLC24A1O60721 1099 aa24.7■■□□□ 1.54
MUC1-204ENST00000343256 WASHC2AQ641Q2 1341 aa24.69■■□□□ 1.54
MUC1-204ENST00000343256 CARD14Q9BXL6 1004 aa24.69■■□□□ 1.54
MUC1-204ENST00000343256 ANKRD26Q9UPS8 1709 aa24.69■■□□□ 1.54
MUC1-204ENST00000343256 ERVV-2B6SEH9 535 aa24.65■■□□□ 1.54
MUC1-204ENST00000343256 USP42Q9H9J4 1324 aaKnown RBP24.64■■□□□ 1.54
MUC1-204ENST00000343256 PTCD1O75127 700 aaKnown RBP24.64■■□□□ 1.54
MUC1-204ENST00000343256 VEGFAP15692 232 aaPredicted RBP24.64■■□□□ 1.54
MUC1-204ENST00000343256 CRKLP46109 303 aaKnown RBP24.64■■□□□ 1.54
MUC1-204ENST00000343256 GLTPD2A6NH11 291 aa24.62■■□□□ 1.53
MUC1-204ENST00000343256 POLRMTO00411 1230 aaKnown RBP24.62■■□□□ 1.53
MUC1-204ENST00000343256 EIF4A2Q14240 407 aaKnown RBP24.62■■□□□ 1.53
MUC1-204ENST00000343256 KDM6AO15550 1401 aaPredicted RBP24.61■■□□□ 1.53
MUC1-204ENST00000343256 CABP4P57796 275 aa24.61■■□□□ 1.53
MUC1-204ENST00000343256 POLKQ9UBT6 870 aa24.61■■□□□ 1.53
MUC1-204ENST00000343256 ZC3H4Q9UPT8 1303 aaKnown RBP24.61■■□□□ 1.53
MUC1-204ENST00000343256 LMNB1P20700 586 aa24.59■■□□□ 1.53
MUC1-204ENST00000343256 TM4SF1P30408 202 aa24.59■■□□□ 1.53
MUC1-204ENST00000343256 HSP90AB1P08238 724 aaKnown RBP24.58■■□□□ 1.53
MUC1-204ENST00000343256 TIAM2Q8IVF5 1701 aa24.58■■□□□ 1.52
MUC1-204ENST00000343256 CCDC88AQ3V6T2 1871 aa24.58■■□□□ 1.52
MUC1-204ENST00000343256 TJP1Q07157 1748 aa24.57■■□□□ 1.52
MUC1-204ENST00000343256 POTECB2RU33 542 aa24.56■■□□□ 1.52
MUC1-204ENST00000343256 USPL1Q5W0Q7 1092 aa24.56■■□□□ 1.52
MUC1-204ENST00000343256 ZNF530Q6P9A1 599 aaPredicted RBP24.56■■□□□ 1.52
MUC1-204ENST00000343256 ADAMTS7Q9UKP4 1686 aa24.56■■□□□ 1.52
MUC1-204ENST00000343256 TNNT2P45379 298 aaPredicted RBP24.55■■□□□ 1.52
MUC1-204ENST00000343256 INTS5Q6P9B9 1019 aaKnown RBP24.55■■□□□ 1.52
MUC1-204ENST00000343256 MKRN1Q9UHC7 482 aaKnown RBP24.55■■□□□ 1.52
MUC1-204ENST00000343256 AFDNP55196 1824 aaKnown RBP24.54■■□□□ 1.52
MUC1-204ENST00000343256 PLEKHO1Q53GL0 409 aaPredicted RBP24.54■■□□□ 1.52
MUC1-204ENST00000343256 CDCA8Q53HL2 280 aa24.53■■□□□ 1.52
MUC1-204ENST00000343256 NFATC2IPQ8NCF5 419 aa24.53■■□□□ 1.52
MUC1-204ENST00000343256 ZPR1O75312 459 aa24.52■■□□□ 1.52
MUC1-204ENST00000343256 MTHFSP49914 203 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms