RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 CCDC30Q5VVM6 783 aa16.98■□□□□ 0.31
PCDH8-201ENST00000338862 MCM2P49736 904 aa16.98■□□□□ 0.31
PCDH8-201ENST00000338862 CHMLP26374 656 aa16.97■□□□□ 0.31
PCDH8-201ENST00000338862 PPP1R42Q7Z4L9 355 aa16.97■□□□□ 0.31
PCDH8-201ENST00000338862 SRCIN1Q9C0H9 1055 aa16.97■□□□□ 0.31
PCDH8-201ENST00000338862 NOLC1Q14978 699 aaKnown RBP eCLIP16.97■□□□□ 0.31
PCDH8-201ENST00000338862 PHAXQ9H814 394 aaKnown RBP16.97■□□□□ 0.31
PCDH8-201ENST00000338862 ASXL2Q76L83 1435 aa16.96■□□□□ 0.31
PCDH8-201ENST00000338862 ABCA6Q8N139 1617 aa16.96■□□□□ 0.31
PCDH8-201ENST00000338862 TAF7Q15545 349 aaPredicted RBP16.96■□□□□ 0.31
PCDH8-201ENST00000338862 PPP4R3BQ5MIZ7 849 aa16.96■□□□□ 0.31
PCDH8-201ENST00000338862 LARP1BQ659C4 914 aaKnown RBP16.96■□□□□ 0.31
PCDH8-201ENST00000338862 ZKSCAN1P17029 563 aaPredicted RBP16.95■□□□□ 0.3
PCDH8-201ENST00000338862 ZRSR1Q15695 479 aaKnown RBP16.95■□□□□ 0.3
PCDH8-201ENST00000338862 CNTROBQ8N137 903 aa16.95■□□□□ 0.3
PCDH8-201ENST00000338862 DDX11Q96FC9 970 aa16.95■□□□□ 0.3
PCDH8-201ENST00000338862 C16orf45Q96MC5 204 aaPredicted RBP16.95■□□□□ 0.3
PCDH8-201ENST00000338862 ATP6V1DQ9Y5K8 247 aa16.95■□□□□ 0.3
PCDH8-201ENST00000338862 ABCC1P33527 1531 aa16.95■□□□□ 0.3
PCDH8-201ENST00000338862 STX6O43752 255 aa16.95■□□□□ 0.3
PCDH8-201ENST00000338862 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.95■□□□□ 0.3
PCDH8-201ENST00000338862 ZMYM3Q14202 1370 aa16.95■□□□□ 0.3
PCDH8-201ENST00000338862 IQSEC2Q5JU85 1478 aa16.94■□□□□ 0.3
PCDH8-201ENST00000338862 GJB2P29033 226 aa16.94■□□□□ 0.3
PCDH8-201ENST00000338862 AK2P54819 239 aa16.94■□□□□ 0.3
PCDH8-201ENST00000338862 FAM69CQ0P6D2 419 aa16.94■□□□□ 0.3
PCDH8-201ENST00000338862 H3BQV1 296 aa16.94■□□□□ 0.3
PCDH8-201ENST00000338862 TEFQ10587 303 aa16.94■□□□□ 0.3
PCDH8-201ENST00000338862 IFFO2Q5TF58 517 aa16.94■□□□□ 0.3
PCDH8-201ENST00000338862 PDRG1Q9NUG6 133 aa16.94■□□□□ 0.3
PCDH8-201ENST00000338862 KIF3AQ9Y496 699 aa16.94■□□□□ 0.3
PCDH8-201ENST00000338862 RTL1A6NKG5 1358 aa16.94■□□□□ 0.3
PCDH8-201ENST00000338862 GOLGA6L6A8MZA4 724 aa16.94■□□□□ 0.3
PCDH8-201ENST00000338862 MAP7D2Q96T17 732 aa16.94■□□□□ 0.3
PCDH8-201ENST00000338862 CCDC8Q9H0W5 538 aaPredicted RBP16.94■□□□□ 0.3
PCDH8-201ENST00000338862 YTHDC2Q9H6S0 1430 aaKnown RBP16.94■□□□□ 0.3
PCDH8-201ENST00000338862 RIMS2Q9UQ26 1411 aa16.94■□□□□ 0.3
PCDH8-201ENST00000338862 CCDC183Q5T5S1 534 aa16.93■□□□□ 0.3
PCDH8-201ENST00000338862 MAP3K4Q9Y6R4 1608 aa16.93■□□□□ 0.3
PCDH8-201ENST00000338862 IQGAP1P46940 1657 aa16.93■□□□□ 0.3
PCDH8-201ENST00000338862 MAPK8IP2Q13387 824 aaPredicted RBP16.93■□□□□ 0.3
PCDH8-201ENST00000338862 CLASRPQ8N2M8 674 aaKnown RBP16.93■□□□□ 0.3
PCDH8-201ENST00000338862 PA2G4Q9UQ80 394 aaKnown RBP16.93■□□□□ 0.3
PCDH8-201ENST00000338862 SYT1P21579 422 aa16.93■□□□□ 0.3
PCDH8-201ENST00000338862 ZNF771Q7L3S4 317 aaPredicted RBP16.93■□□□□ 0.3
PCDH8-201ENST00000338862 FMNL2Q96PY5 1086 aa16.93■□□□□ 0.3
PCDH8-201ENST00000338862 ZNF330Q9Y3S2 320 aaPredicted RBP16.92■□□□□ 0.3
PCDH8-201ENST00000338862 LAMC1P11047 1609 aa16.92■□□□□ 0.3
PCDH8-201ENST00000338862 ACEP12821 1306 aa16.92■□□□□ 0.3
PCDH8-201ENST00000338862 BRD1O95696 1058 aa16.92■□□□□ 0.3
PCDH8-201ENST00000338862 FSD1Q9BTV5 496 aa16.91■□□□□ 0.3
PCDH8-201ENST00000338862 BOLA2Q9H3K6 86 aa16.91■□□□□ 0.3
PCDH8-201ENST00000338862 CHL1O00533 1208 aa16.91■□□□□ 0.3
PCDH8-201ENST00000338862 FILIP1Q7Z7B0 1213 aa16.91■□□□□ 0.3
PCDH8-201ENST00000338862 ZBTB9Q96C00 473 aa16.91■□□□□ 0.3
PCDH8-201ENST00000338862 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.91■□□□□ 0.3
PCDH8-201ENST00000338862 V9GYY5 206 aaPredicted RBP16.91■□□□□ 0.3
PCDH8-201ENST00000338862 PLXNC1O60486 1568 aa16.91■□□□□ 0.3
PCDH8-201ENST00000338862 PTPRCP08575 1304 aa16.91■□□□□ 0.3
PCDH8-201ENST00000338862 DYNC1I1O14576 645 aa16.91■□□□□ 0.3
PCDH8-201ENST00000338862 AACSQ86V21 672 aa16.91■□□□□ 0.3
PCDH8-201ENST00000338862 CYP46A1Q9Y6A2 500 aa16.91■□□□□ 0.3
PCDH8-201ENST00000338862 SPHKAPQ2M3C7 1700 aa16.9■□□□□ 0.3
PCDH8-201ENST00000338862 PI4KAP2A4QPH2 592 aa16.9■□□□□ 0.3
PCDH8-201ENST00000338862 PI4KAP1Q8N8J0 262 aa16.9■□□□□ 0.3
PCDH8-201ENST00000338862 PODXL2Q9NZ53 605 aa16.9■□□□□ 0.3
PCDH8-201ENST00000338862 LIMCH1Q9UPQ0 1083 aa16.9■□□□□ 0.3
PCDH8-201ENST00000338862 ZFYVE16Q7Z3T8 1539 aa16.9■□□□□ 0.3
PCDH8-201ENST00000338862 BECN2A8MW95 431 aa16.9■□□□□ 0.3
PCDH8-201ENST00000338862 ZSCAN22P10073 491 aaPredicted RBP16.9■□□□□ 0.3
PCDH8-201ENST00000338862 CEP152O94986 1710 aa16.9■□□□□ 0.3
PCDH8-201ENST00000338862 GOLGA6L19H0YKK7 550 aa16.9■□□□□ 0.3
PCDH8-201ENST00000338862 ZNF853P0CG23 659 aa16.9■□□□□ 0.3
PCDH8-201ENST00000338862 TPD52L1Q16890 204 aaPredicted RBP16.9■□□□□ 0.3
PCDH8-201ENST00000338862 PDCL2Q8N4E4 241 aa16.9■□□□□ 0.3
PCDH8-201ENST00000338862 ABTB2Q8N961 1025 aa16.9■□□□□ 0.3
PCDH8-201ENST00000338862 FAM184AQ8NB25 1140 aa16.9■□□□□ 0.3
PCDH8-201ENST00000338862 TNMDQ9H2S6 317 aa16.9■□□□□ 0.3
PCDH8-201ENST00000338862 LUZP1Q86V48 1076 aa16.89■□□□□ 0.29
PCDH8-201ENST00000338862 RASEFQ8IZ41 740 aa16.89■□□□□ 0.29
PCDH8-201ENST00000338862 RHPN1Q8TCX5 695 aa16.89■□□□□ 0.29
PCDH8-201ENST00000338862 GPATCH3Q96I76 525 aa16.89■□□□□ 0.29
PCDH8-201ENST00000338862 LRRC2Q9BYS8 371 aa16.89■□□□□ 0.29
PCDH8-201ENST00000338862 MYOM2P54296 1465 aa16.89■□□□□ 0.29
PCDH8-201ENST00000338862 CCDC192P0DO97 292 aa16.89■□□□□ 0.29
PCDH8-201ENST00000338862 IL25Q9H293 177 aa16.89■□□□□ 0.29
PCDH8-201ENST00000338862 RUFY2Q8WXA3 655 aa16.88■□□□□ 0.29
PCDH8-201ENST00000338862 RAB11FIP3O75154 756 aa16.88■□□□□ 0.29
PCDH8-201ENST00000338862 OSCARQ8IYS5 282 aa16.88■□□□□ 0.29
PCDH8-201ENST00000338862 PTGS1P23219 599 aa16.88■□□□□ 0.29
PCDH8-201ENST00000338862 TRMT1Q9NXH9 659 aaKnown RBP16.88■□□□□ 0.29
PCDH8-201ENST00000338862 ZNF500O60304 480 aaPredicted RBP16.87■□□□□ 0.29
PCDH8-201ENST00000338862 HDGFP51858 240 aaKnown RBP16.87■□□□□ 0.29
PCDH8-201ENST00000338862 ATP8B2P98198 1209 aa16.87■□□□□ 0.29
PCDH8-201ENST00000338862 GUCY1B3Q02153 619 aa16.87■□□□□ 0.29
PCDH8-201ENST00000338862 RNF17Q9BXT8 1623 aaKnown RBP16.87■□□□□ 0.29
PCDH8-201ENST00000338862 NBPF7P0C2Y1 421 aaPredicted RBP16.87■□□□□ 0.29
PCDH8-201ENST00000338862 HMGN5P82970 282 aaKnown RBP16.87■□□□□ 0.29
PCDH8-201ENST00000338862 DNAJC2Q99543 621 aaKnown RBP16.87■□□□□ 0.29
PCDH8-201ENST00000338862 MYOM1P52179 1685 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms