RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 UTRNP46939 3433 aa14.56□□□□□ -0.08
CAPN3-202ENST00000337571 NCAPD2Q15021 1401 aa14.56□□□□□ -0.08
CAPN3-202ENST00000337571 PLEKHO1Q53GL0 409 aaPredicted RBP14.55□□□□□ -0.08
CAPN3-202ENST00000337571 TAF1LQ8IZX4 1826 aa14.55□□□□□ -0.08
CAPN3-202ENST00000337571 CHD4Q14839 1912 aa14.54□□□□□ -0.08
CAPN3-202ENST00000337571 LOC102724428A0A0B4J2F2 783 aa14.54□□□□□ -0.08
CAPN3-202ENST00000337571 HSP90AB1P08238 724 aaKnown RBP14.54□□□□□ -0.08
CAPN3-202ENST00000337571 SIK1P57059 783 aa14.54□□□□□ -0.08
CAPN3-202ENST00000337571 MSL1Q68DK7 614 aa14.54□□□□□ -0.08
CAPN3-202ENST00000337571 COL24A1Q17RW2 1714 aa14.54□□□□□ -0.08
CAPN3-202ENST00000337571 TOGARAM1Q9Y4F4 1720 aa14.53□□□□□ -0.08
CAPN3-202ENST00000337571 ATP6V1AP38606 617 aa14.53□□□□□ -0.08
CAPN3-202ENST00000337571 AMOTQ4VCS5 1084 aa14.53□□□□□ -0.08
CAPN3-202ENST00000337571 GOLGB1Q14789 3259 aaKnown RBP14.52□□□□□ -0.08
CAPN3-202ENST00000337571 IGSF1Q8N6C5 1336 aa14.52□□□□□ -0.08
CAPN3-202ENST00000337571 ERVV-2B6SEH9 535 aa14.52□□□□□ -0.09
CAPN3-202ENST00000337571 PHF14O94880 888 aa14.52□□□□□ -0.09
CAPN3-202ENST00000337571 DCAF5Q96JK2 942 aa14.52□□□□□ -0.09
CAPN3-202ENST00000337571 ASAP1Q9ULH1 1129 aa14.52□□□□□ -0.09
CAPN3-202ENST00000337571 C4BP0C0L5 1744 aa14.52□□□□□ -0.09
CAPN3-202ENST00000337571 PLEKHG2Q9H7P9 1386 aa14.51□□□□□ -0.09
CAPN3-202ENST00000337571 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.51□□□□□ -0.09
CAPN3-202ENST00000337571 C1orf141Q5JVX7 400 aa14.51□□□□□ -0.09
CAPN3-202ENST00000337571 NLGN2Q8NFZ4 835 aa14.51□□□□□ -0.09
CAPN3-202ENST00000337571 GRIN3BO60391 1043 aa14.5□□□□□ -0.09
CAPN3-202ENST00000337571 SSFA2P28290 1259 aa14.5□□□□□ -0.09
CAPN3-202ENST00000337571 MTHFSP49914 203 aa14.5□□□□□ -0.09
CAPN3-202ENST00000337571 CABP4P57796 275 aa14.5□□□□□ -0.09
CAPN3-202ENST00000337571 ZNF530Q6P9A1 599 aaPredicted RBP14.5□□□□□ -0.09
CAPN3-202ENST00000337571 ZNF784Q8NCA9 323 aaPredicted RBP14.5□□□□□ -0.09
CAPN3-202ENST00000337571 ATG3Q9NT62 314 aa14.5□□□□□ -0.09
CAPN3-202ENST00000337571 CD2APQ9Y5K6 639 aa14.5□□□□□ -0.09
CAPN3-202ENST00000337571 GNPATO15228 680 aa14.49□□□□□ -0.09
CAPN3-202ENST00000337571 SULT6B1Q6IMI4 303 aa14.49□□□□□ -0.09
CAPN3-202ENST00000337571 LINC00116Q8NCU8 138 aa14.49□□□□□ -0.09
CAPN3-202ENST00000337571 RBM42Q9BTD8 480 aaKnown RBP14.49□□□□□ -0.09
CAPN3-202ENST00000337571 ITPK1Q13572 414 aa14.47□□□□□ -0.09
CAPN3-202ENST00000337571 UBR3Q6ZT12 1888 aa14.46□□□□□ -0.09
CAPN3-202ENST00000337571 KIF7Q2M1P5 1343 aa14.46□□□□□ -0.09
CAPN3-202ENST00000337571 TRAPPC3LQ5T215 181 aa14.46□□□□□ -0.09
CAPN3-202ENST00000337571 SMIM5Q71RC9 77 aa14.46□□□□□ -0.09
CAPN3-202ENST00000337571 AEBP1Q8IUX7 1158 aa14.46□□□□□ -0.09
CAPN3-202ENST00000337571 RTCBQ9Y3I0 505 aaKnown RBP14.46□□□□□ -0.09
CAPN3-202ENST00000337571 IL13P35225 146 aa14.45□□□□□ -0.1
CAPN3-202ENST00000337571 AMER1Q5JTC6 1135 aaPredicted RBP14.45□□□□□ -0.1
CAPN3-202ENST00000337571 AMIGO3Q86WK7 504 aa14.44□□□□□ -0.1
CAPN3-202ENST00000337571 NFATC2IPQ8NCF5 419 aa14.44□□□□□ -0.1
CAPN3-202ENST00000337571 YBX3P16989 372 aaKnown RBP eCLIP14.43□□□□□ -0.1
CAPN3-202ENST00000337571 RFC4P35249 363 aa14.43□□□□□ -0.1
CAPN3-202ENST00000337571 CC2D1BQ5T0F9 858 aaKnown RBP14.43□□□□□ -0.1
CAPN3-202ENST00000337571 RC3H1Q5TC82 1133 aaKnown RBP14.43□□□□□ -0.1
CAPN3-202ENST00000337571 NLGN1Q8N2Q7 840 aa14.43□□□□□ -0.1
CAPN3-202ENST00000337571 PTCD1O75127 700 aaKnown RBP14.42□□□□□ -0.1
CAPN3-202ENST00000337571 AKAP4Q5JQC9 854 aa14.42□□□□□ -0.1
CAPN3-202ENST00000337571 DIAPH1O60610 1272 aaKnown RBP14.41□□□□□ -0.1
CAPN3-202ENST00000337571 CNGB1Q14028 1251 aaPredicted RBP14.41□□□□□ -0.1
CAPN3-202ENST00000337571 KDM6AO15550 1401 aaPredicted RBP14.41□□□□□ -0.1
CAPN3-202ENST00000337571 ZNF831Q5JPB2 1677 aa14.4□□□□□ -0.1
CAPN3-202ENST00000337571 KDRP35968 1356 aa14.4□□□□□ -0.1
CAPN3-202ENST00000337571 PER1O15534 1290 aaPredicted RBP14.4□□□□□ -0.1
CAPN3-202ENST00000337571 RPS6KA4O75676 772 aa14.4□□□□□ -0.1
CAPN3-202ENST00000337571 MMP10P09238 476 aa14.4□□□□□ -0.1
CAPN3-202ENST00000337571 HMOX1P09601 288 aa14.4□□□□□ -0.1
CAPN3-202ENST00000337571 ARHGEF1Q92888 912 aaKnown RBP14.4□□□□□ -0.1
CAPN3-202ENST00000337571 SLC4A9Q96Q91 983 aa14.4□□□□□ -0.1
CAPN3-202ENST00000337571 CNTNAP4Q9C0A0 1308 aa14.4□□□□□ -0.1
CAPN3-202ENST00000337571 GIGYF1O75420 1035 aaPredicted RBP14.38□□□□□ -0.11
CAPN3-202ENST00000337571 PARP3Q9Y6F1 533 aa14.38□□□□□ -0.11
CAPN3-202ENST00000337571 SCN11AQ9UI33 1791 aa14.37□□□□□ -0.11
CAPN3-202ENST00000337571 C1QTNF8P60827 252 aa14.37□□□□□ -0.11
CAPN3-202ENST00000337571 WWC3Q9ULE0 1092 aa14.37□□□□□ -0.11
CAPN3-202ENST00000337571 COL5A3P25940 1745 aaPredicted RBP14.36□□□□□ -0.11
CAPN3-202ENST00000337571 U2SURPO15042 1029 aaKnown RBP14.36□□□□□ -0.11
CAPN3-202ENST00000337571 CRKLP46109 303 aaKnown RBP14.36□□□□□ -0.11
CAPN3-202ENST00000337571 TGFB2P61812 414 aa14.36□□□□□ -0.11
CAPN3-202ENST00000337571 SLC52A2Q9HAB3 445 aa14.36□□□□□ -0.11
CAPN3-202ENST00000337571 LGR6Q9HBX8 967 aa14.36□□□□□ -0.11
CAPN3-202ENST00000337571 CCDC87Q9NVE4 849 aa14.36□□□□□ -0.11
CAPN3-202ENST00000337571 GYS1P13807 737 aa14.35□□□□□ -0.11
CAPN3-202ENST00000337571 MTHFSDQ2M296 383 aaKnown RBP14.35□□□□□ -0.11
CAPN3-202ENST00000337571 RNMTO43148 476 aaKnown RBP14.34□□□□□ -0.11
CAPN3-202ENST00000337571 SENP3-EIF4A1A0A087X0R7 540 aa14.33□□□□□ -0.12
CAPN3-202ENST00000337571 A0A0G2JLW4 131 aa14.33□□□□□ -0.12
CAPN3-202ENST00000337571 ZPR1O75312 459 aa14.33□□□□□ -0.12
CAPN3-202ENST00000337571 CFAP53Q96M91 514 aa14.33□□□□□ -0.12
CAPN3-202ENST00000337571 GPBP1L1Q9HC44 474 aaPredicted RBP14.33□□□□□ -0.12
CAPN3-202ENST00000337571 NPC1L1Q9UHC9 1359 aa14.33□□□□□ -0.12
CAPN3-202ENST00000337571 MYH14Q7Z406 1995 aaKnown RBP14.33□□□□□ -0.12
CAPN3-202ENST00000337571 VIRMAQ69YN4 1812 aaKnown RBP14.32□□□□□ -0.12
CAPN3-202ENST00000337571 CICQ96RK0 1608 aaPredicted RBP14.31□□□□□ -0.12
CAPN3-202ENST00000337571 SLC39A6Q13433 755 aa14.31□□□□□ -0.12
CAPN3-202ENST00000337571 INTS5Q6P9B9 1019 aaKnown RBP14.31□□□□□ -0.12
CAPN3-202ENST00000337571 DNAJC10Q8IXB1 793 aa14.31□□□□□ -0.12
CAPN3-202ENST00000337571 TTC5Q8N0Z6 440 aa14.31□□□□□ -0.12
CAPN3-202ENST00000337571 GAS2L2Q8NHY3 880 aa14.31□□□□□ -0.12
CAPN3-202ENST00000337571 BCS1LQ9Y276 419 aa14.31□□□□□ -0.12
CAPN3-202ENST00000337571 ZBTB12Q9Y330 459 aaPredicted RBP14.31□□□□□ -0.12
CAPN3-202ENST00000337571 C4AP0C0L4 1744 aa14.3□□□□□ -0.12
CAPN3-202ENST00000337571 GNAT3A8MTJ3 354 aa14.3□□□□□ -0.12
CAPN3-202ENST00000337571 TEFQ10587 303 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms