RNA–Protein interactions for RNA: ENST00000333229.6

BRWD1-201, Transcript of bromodomain and WD repeat domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRWD1, Length 10,141 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRWD1-201ENST00000333229 PSMD1Q99460 953 aa15.48■□□□□ 0.07
BRWD1-201ENST00000333229 HOMER2Q9NSB8 354 aa15.48■□□□□ 0.07
BRWD1-201ENST00000333229 CNNM1Q9NRU3 951 aa15.47■□□□□ 0.07
BRWD1-201ENST00000333229 HMGB1P1B2RPK0 211 aaPredicted RBP15.47■□□□□ 0.07
BRWD1-201ENST00000333229 KRT85P78386 507 aa15.47■□□□□ 0.07
BRWD1-201ENST00000333229 CASQ2O14958 399 aaPredicted RBP15.47■□□□□ 0.07
BRWD1-201ENST00000333229 VPS36Q86VN1 386 aa15.47■□□□□ 0.07
BRWD1-201ENST00000333229 WHAMMQ8TF30 809 aa15.47■□□□□ 0.07
BRWD1-201ENST00000333229 LMNTD2Q8IXW0 634 aa15.47■□□□□ 0.07
BRWD1-201ENST00000333229 EIF5P55010 431 aaKnown RBP15.47■□□□□ 0.07
BRWD1-201ENST00000333229 RAB3IL1Q8TBN0 382 aa15.47■□□□□ 0.07
BRWD1-201ENST00000333229 PAXBP1Q9Y5B6 917 aa15.47■□□□□ 0.07
BRWD1-201ENST00000333229 CLNS1AP54105 237 aaKnown RBP15.47■□□□□ 0.07
BRWD1-201ENST00000333229 PIBF1Q8WXW3 757 aa15.47■□□□□ 0.07
BRWD1-201ENST00000333229 NEMFO60524 1076 aa15.47■□□□□ 0.07
BRWD1-201ENST00000333229 STRN4Q9NRL3 753 aa15.47■□□□□ 0.07
BRWD1-201ENST00000333229 PPP1R14CQ8TAE6 165 aa15.46■□□□□ 0.07
BRWD1-201ENST00000333229 TSPYL2Q9H2G4 693 aaPredicted RBP15.46■□□□□ 0.07
BRWD1-201ENST00000333229 ALS2CR12Q96Q35 445 aa15.46■□□□□ 0.07
BRWD1-201ENST00000333229 USO1O60763 962 aaKnown RBP15.46■□□□□ 0.07
BRWD1-201ENST00000333229 PDE1CQ14123 709 aaPredicted RBP15.46■□□□□ 0.07
BRWD1-201ENST00000333229 BAZ1AQ9NRL2 1556 aaPredicted RBP15.46■□□□□ 0.07
BRWD1-201ENST00000333229 KIF4AO95239 1232 aa15.46■□□□□ 0.07
BRWD1-201ENST00000333229 TPD52P55327 224 aaPredicted RBP15.46■□□□□ 0.07
BRWD1-201ENST00000333229 TTC14Q96N46 770 aa15.46■□□□□ 0.07
BRWD1-201ENST00000333229 STMN4Q9H169 189 aaPredicted RBP15.46■□□□□ 0.07
BRWD1-201ENST00000333229 PAFAH1B1P43034 410 aa15.45■□□□□ 0.06
BRWD1-201ENST00000333229 FMNL3Q8IVF7 1028 aa15.45■□□□□ 0.06
BRWD1-201ENST00000333229 CCDC50Q8IVM0 306 aa15.45■□□□□ 0.06
BRWD1-201ENST00000333229 SPINK5Q9NQ38 1064 aaPredicted RBP15.45■□□□□ 0.06
BRWD1-201ENST00000333229 EBAG9O00559 213 aa15.45■□□□□ 0.06
BRWD1-201ENST00000333229 KIF4BQ2VIQ3 1234 aa15.45■□□□□ 0.06
BRWD1-201ENST00000333229 USH1CQ9Y6N9 552 aa15.45■□□□□ 0.06
BRWD1-201ENST00000333229 TTC36A6NLP5 189 aa15.45■□□□□ 0.06
BRWD1-201ENST00000333229 TSNARE1Q96NA8 513 aa15.45■□□□□ 0.06
BRWD1-201ENST00000333229 NUP62CLQ9H1M0 184 aa15.45■□□□□ 0.06
BRWD1-201ENST00000333229 VCX3BQ9H321 246 aa15.45■□□□□ 0.06
BRWD1-201ENST00000333229 ZNF365Q70YC5 407 aa15.45■□□□□ 0.06
BRWD1-201ENST00000333229 OTUD6BQ8N6M0 293 aa15.45■□□□□ 0.06
BRWD1-201ENST00000333229 BANK1Q8NDB2 785 aa15.45■□□□□ 0.06
BRWD1-201ENST00000333229 HLTFQ14527 1009 aaKnown RBP eCLIP15.44■□□□□ 0.069e-7■■□□□ 12.3
BRWD1-201ENST00000333229 IKBKGQ9Y6K9 419 aa15.44■□□□□ 0.06
BRWD1-201ENST00000333229 BRD2P25440 801 aaKnown RBP15.44■□□□□ 0.06
BRWD1-201ENST00000333229 MAP3K9P80192 1104 aa15.44■□□□□ 0.06
BRWD1-201ENST00000333229 WHAMMP3Q1A5X7 153 aa15.44■□□□□ 0.06
BRWD1-201ENST00000333229 ZC4H2Q9NQZ6 224 aa15.44■□□□□ 0.06
BRWD1-201ENST00000333229 CFAP100Q494V2 611 aa15.44■□□□□ 0.06
BRWD1-201ENST00000333229 URI1O94763 535 aaPredicted RBP15.44■□□□□ 0.06
BRWD1-201ENST00000333229 ATP2C2O75185 946 aa15.44■□□□□ 0.06
BRWD1-201ENST00000333229 PPFIA2O75334 1257 aa15.44■□□□□ 0.06
BRWD1-201ENST00000333229 APBB1IPQ7Z5R6 666 aaPredicted RBP15.44■□□□□ 0.06
BRWD1-201ENST00000333229 CCDC171Q6TFL3 1326 aa15.44■□□□□ 0.06
BRWD1-201ENST00000333229 MAP3K7CLP57077 242 aa15.44■□□□□ 0.06
BRWD1-201ENST00000333229 LACTBP83111 547 aaPredicted RBP15.44■□□□□ 0.06
BRWD1-201ENST00000333229 ATP11AP98196 1134 aa15.44■□□□□ 0.06
BRWD1-201ENST00000333229 AP1ARQ63HQ0 302 aa15.44■□□□□ 0.06
BRWD1-201ENST00000333229 RUNDC1Q96C34 613 aa15.43■□□□□ 0.06
BRWD1-201ENST00000333229 GNAI1P63096 354 aa15.43■□□□□ 0.06
BRWD1-201ENST00000333229 MAP4K4O95819 1239 aaPredicted RBP15.43■□□□□ 0.06
BRWD1-201ENST00000333229 A0A1W2PRG0 241 aa15.43■□□□□ 0.06
BRWD1-201ENST00000333229 CCDC69A6NI79 296 aa15.43■□□□□ 0.06
BRWD1-201ENST00000333229 CCDC94Q9BW85 323 aaPredicted RBP15.43■□□□□ 0.06
BRWD1-201ENST00000333229 ANKRD1Q15327 319 aa15.43■□□□□ 0.06
BRWD1-201ENST00000333229 C16orf45Q96MC5 204 aaPredicted RBP15.43■□□□□ 0.06
BRWD1-201ENST00000333229 CACNA2D3Q8IZS8 1091 aa15.43■□□□□ 0.06
BRWD1-201ENST00000333229 SIL1Q9H173 461 aa15.43■□□□□ 0.06
BRWD1-201ENST00000333229 MIA2Q96PC5 1412 aa15.43■□□□□ 0.06
BRWD1-201ENST00000333229 CCDC110Q8TBZ0 833 aa15.43■□□□□ 0.06
BRWD1-201ENST00000333229 SRRTQ9BXP5 876 aaKnown RBP15.42■□□□□ 0.06
BRWD1-201ENST00000333229 MAP3K11Q16584 847 aa15.42■□□□□ 0.06
BRWD1-201ENST00000333229 SF3B2Q13435 895 aaKnown RBP15.42■□□□□ 0.06
BRWD1-201ENST00000333229 ZNF76P36508 570 aa15.42■□□□□ 0.06
BRWD1-201ENST00000333229 CCDC155Q8N6L0 562 aa15.42■□□□□ 0.06
BRWD1-201ENST00000333229 C1orf115Q9H7X2 142 aa15.42■□□□□ 0.06
BRWD1-201ENST00000333229 HIP1O00291 1037 aa15.42■□□□□ 0.06
BRWD1-201ENST00000333229 PRR16Q569H4 304 aa15.42■□□□□ 0.06
BRWD1-201ENST00000333229 CCDC114Q96M63 670 aa15.42■□□□□ 0.06
BRWD1-201ENST00000333229 ARFGAP3Q9NP61 516 aa15.42■□□□□ 0.06
BRWD1-201ENST00000333229 GBP1P32455 592 aa15.41■□□□□ 0.06
BRWD1-201ENST00000333229 MYCBPQ99417 103 aaPredicted RBP15.41■□□□□ 0.06
BRWD1-201ENST00000333229 DNAI2Q9GZS0 605 aa15.41■□□□□ 0.06
BRWD1-201ENST00000333229 XPCQ01831 940 aaPredicted RBP15.41■□□□□ 0.06
BRWD1-201ENST00000333229 LARP1Q6PKG0 1096 aaKnown RBP15.41■□□□□ 0.06
BRWD1-201ENST00000333229 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.41■□□□□ 0.064e-7■■■□□ 16.2
BRWD1-201ENST00000333229 TDRD9Q8NDG6 1382 aaKnown RBP15.41■□□□□ 0.06
BRWD1-201ENST00000333229 SURF6O75683 361 aaKnown RBP15.41■□□□□ 0.06
BRWD1-201ENST00000333229 TRIM22Q8IYM9 498 aa15.41■□□□□ 0.06
BRWD1-201ENST00000333229 CAPN2P17655 700 aa15.41■□□□□ 0.06
BRWD1-201ENST00000333229 STMN2Q93045 179 aa15.41■□□□□ 0.06
BRWD1-201ENST00000333229 TSNAXIP1Q2TAA8 658 aa15.41■□□□□ 0.06
BRWD1-201ENST00000333229 KLHL10Q6JEL2 608 aa15.41■□□□□ 0.06
BRWD1-201ENST00000333229 SEPT8Q92599 483 aa15.41■□□□□ 0.06
BRWD1-201ENST00000333229 CIZ1Q9ULV3 898 aaPredicted RBP15.4■□□□□ 0.06
BRWD1-201ENST00000333229 NEK4P51957 841 aa15.4■□□□□ 0.06
BRWD1-201ENST00000333229 MAP7D1Q3KQU3 841 aa15.4■□□□□ 0.06
BRWD1-201ENST00000333229 MYCNP04198 464 aaPredicted RBP15.4■□□□□ 0.06
BRWD1-201ENST00000333229 BUB1BO60566 1050 aaPredicted RBP15.4■□□□□ 0.06
BRWD1-201ENST00000333229 GSDMDP57764 484 aa15.4■□□□□ 0.06
BRWD1-201ENST00000333229 SPATA32Q96LK8 384 aa15.4■□□□□ 0.06
BRWD1-201ENST00000333229 PCK1P35558 622 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms