RNA–Protein interactions for RNA: ENST00000323829.9

SH3TC2-201, Transcript of SH3 domain and tetratricopeptide repeats 2, humanhuman

TSL 1 (best)

Gene SH3TC2, Length 7,324 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC2-201ENST00000323829 MCM4P33991 863 aa10.29□□□□□ -0.76
SH3TC2-201ENST00000323829 MIPOL1Q8TD10 442 aa10.29□□□□□ -0.76
SH3TC2-201ENST00000323829 ATP6V1E1P36543 226 aa10.29□□□□□ -0.76
SH3TC2-201ENST00000323829 EIF5P55010 431 aaKnown RBP10.29□□□□□ -0.76
SH3TC2-201ENST00000323829 FBF1Q8TES7 1133 aa10.29□□□□□ -0.76
SH3TC2-201ENST00000323829 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.29□□□□□ -0.76
SH3TC2-201ENST00000323829 GRIN2BQ13224 1484 aa10.29□□□□□ -0.76
SH3TC2-201ENST00000323829 REC8O95072 547 aa10.29□□□□□ -0.76
SH3TC2-201ENST00000323829 RIPK4P57078 832 aa10.29□□□□□ -0.76
SH3TC2-201ENST00000323829 DHX8Q14562 1220 aaKnown RBP10.29□□□□□ -0.76
SH3TC2-201ENST00000323829 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.29□□□□□ -0.76
SH3TC2-201ENST00000323829 V9GYY5 206 aaPredicted RBP10.29□□□□□ -0.76
SH3TC2-201ENST00000323829 SPG7Q9UQ90 795 aa10.29□□□□□ -0.76
SH3TC2-201ENST00000323829 SYNJ2O15056 1496 aa10.29□□□□□ -0.76
SH3TC2-201ENST00000323829 ZKSCAN2Q63HK3 967 aa10.29□□□□□ -0.76
SH3TC2-201ENST00000323829 TTC39AQ5SRH9 613 aa10.28□□□□□ -0.76
SH3TC2-201ENST00000323829 C16orf71Q8IYS4 520 aaPredicted RBP10.28□□□□□ -0.76
SH3TC2-201ENST00000323829 RFC1P35251 1148 aaPredicted RBP10.28□□□□□ -0.76
SH3TC2-201ENST00000323829 CCDC6Q16204 474 aa10.28□□□□□ -0.76
SH3TC2-201ENST00000323829 CCDC63Q8NA47 563 aa10.28□□□□□ -0.76
SH3TC2-201ENST00000323829 BMP2KQ9NSY1 1161 aaPredicted RBP10.28□□□□□ -0.76
SH3TC2-201ENST00000323829 PIP4K2AP48426 406 aaPredicted RBP10.28□□□□□ -0.76
SH3TC2-201ENST00000323829 CCDC69A6NI79 296 aa10.27□□□□□ -0.76
SH3TC2-201ENST00000323829 SEPT14Q6ZU15 432 aa10.27□□□□□ -0.76
SH3TC2-201ENST00000323829 SPINK5Q9NQ38 1064 aaPredicted RBP10.27□□□□□ -0.76
SH3TC2-201ENST00000323829 STK38Q15208 465 aa10.27□□□□□ -0.76
SH3TC2-201ENST00000323829 CDCA7LQ96GN5 454 aa10.27□□□□□ -0.76
SH3TC2-201ENST00000323829 CNNM1Q9NRU3 951 aa10.27□□□□□ -0.76
SH3TC2-201ENST00000323829 CEP120Q8N960 986 aa10.27□□□□□ -0.77
SH3TC2-201ENST00000323829 GGNBP2Q9H3C7 697 aa10.27□□□□□ -0.77
SH3TC2-201ENST00000323829 RAI14Q9P0K7 980 aa10.27□□□□□ -0.77
SH3TC2-201ENST00000323829 DZIP1LQ8IYY4 767 aaKnown RBP10.27□□□□□ -0.77
SH3TC2-201ENST00000323829 CRACR2AQ9BSW2 395 aa10.27□□□□□ -0.77
SH3TC2-201ENST00000323829 LRRC9Q6ZRR7 1453 aa10.27□□□□□ -0.77
SH3TC2-201ENST00000323829 FSD2A1L4K1 749 aa10.27□□□□□ -0.77
SH3TC2-201ENST00000323829 APAF1O14727 1248 aa10.27□□□□□ -0.77
SH3TC2-201ENST00000323829 SPECC1Q5M775 1068 aa10.27□□□□□ -0.77
SH3TC2-201ENST00000323829 CCDC148Q8NFR7 591 aa10.27□□□□□ -0.77
SH3TC2-201ENST00000323829 ANKFY1Q9P2R3 1169 aa10.27□□□□□ -0.77
SH3TC2-201ENST00000323829 KIF20AO95235 890 aa10.27□□□□□ -0.77
SH3TC2-201ENST00000323829 PRPF4BQ13523 1007 aaKnown RBP10.27□□□□□ -0.77
SH3TC2-201ENST00000323829 ATP2B3Q16720 1220 aa10.27□□□□□ -0.77
SH3TC2-201ENST00000323829 LUZP1Q86V48 1076 aa10.26□□□□□ -0.77
SH3TC2-201ENST00000323829 A0A1W2PRG0 241 aa10.26□□□□□ -0.77
SH3TC2-201ENST00000323829 FGD6Q6ZV73 1430 aa10.26□□□□□ -0.77
SH3TC2-201ENST00000323829 TNIP1Q15025 636 aa10.26□□□□□ -0.77
SH3TC2-201ENST00000323829 CWC25Q9NXE8 425 aaPredicted RBP10.26□□□□□ -0.77
SH3TC2-201ENST00000323829 DYNC1I1O14576 645 aa10.26□□□□□ -0.77
SH3TC2-201ENST00000323829 KIF5AQ12840 1032 aa10.26□□□□□ -0.77
SH3TC2-201ENST00000323829 ZNF397Q8NF99 534 aaPredicted RBP10.26□□□□□ -0.77
SH3TC2-201ENST00000323829 GNL3LQ9NVN8 582 aaKnown RBP10.26□□□□□ -0.77
SH3TC2-201ENST00000323829 CCDC144CPQ8IYA2 1237 aa10.26□□□□□ -0.77
SH3TC2-201ENST00000323829 IKBKGQ9Y6K9 419 aa10.26□□□□□ -0.77
SH3TC2-201ENST00000323829 ZBTB16Q05516 673 aa10.26□□□□□ -0.77
SH3TC2-201ENST00000323829 SPTY2D1Q68D10 685 aaPredicted RBP10.26□□□□□ -0.77
SH3TC2-201ENST00000323829 ZSCAN30Q86W11 494 aa10.26□□□□□ -0.77
SH3TC2-201ENST00000323829 DDX11Q96FC9 970 aa10.26□□□□□ -0.77
SH3TC2-201ENST00000323829 MKRN1Q9UHC7 482 aaKnown RBP10.26□□□□□ -0.77
SH3TC2-201ENST00000323829 NOP9Q86U38 636 aaKnown RBP10.25□□□□□ -0.77
SH3TC2-201ENST00000323829 SREK1Q8WXA9 508 aaKnown RBP10.25□□□□□ -0.77
SH3TC2-201ENST00000323829 PRAM1Q96QH2 718 aa10.25□□□□□ -0.77
SH3TC2-201ENST00000323829 DDX19BQ9UMR2 479 aa10.25□□□□□ -0.77
SH3TC2-201ENST00000323829 CCDC174Q6PII3 467 aa10.25□□□□□ -0.77
SH3TC2-201ENST00000323829 TRIM22Q8IYM9 498 aa10.25□□□□□ -0.77
SH3TC2-201ENST00000323829 SNX16P57768 344 aa10.25□□□□□ -0.77
SH3TC2-201ENST00000323829 CUL4BQ13620 913 aa10.25□□□□□ -0.77
SH3TC2-201ENST00000323829 HAUS7Q99871 368 aa10.25□□□□□ -0.77
SH3TC2-201ENST00000323829 FSD1Q9BTV5 496 aa10.25□□□□□ -0.77
SH3TC2-201ENST00000323829 FAM107BQ9H098 131 aa10.25□□□□□ -0.77
SH3TC2-201ENST00000323829 TOM1O60784 492 aa10.25□□□□□ -0.77
SH3TC2-201ENST00000323829 ZC3H6P61129 1189 aaKnown RBP10.25□□□□□ -0.77
SH3TC2-201ENST00000323829 GBP7Q8N8V2 638 aaPredicted RBP10.25□□□□□ -0.77
SH3TC2-201ENST00000323829 ZPR1O75312 459 aa10.25□□□□□ -0.77
SH3TC2-201ENST00000323829 LCA5Q86VQ0 697 aa10.25□□□□□ -0.77
SH3TC2-201ENST00000323829 PROCA1Q8NCQ7 364 aaPredicted RBP10.25□□□□□ -0.77
SH3TC2-201ENST00000323829 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.25□□□□□ -0.77
SH3TC2-201ENST00000323829 ERC2O15083 957 aa10.24□□□□□ -0.77
SH3TC2-201ENST00000323829 PPP1R12BO60237 982 aaPredicted RBP10.24□□□□□ -0.77
SH3TC2-201ENST00000323829 CLCN1P35523 988 aa10.24□□□□□ -0.77
SH3TC2-201ENST00000323829 DPH6Q7L8W6 267 aa10.24□□□□□ -0.77
SH3TC2-201ENST00000323829 PDCD7Q8N8D1 485 aaKnown RBP10.24□□□□□ -0.77
SH3TC2-201ENST00000323829 MMRN2Q9H8L6 949 aa10.24□□□□□ -0.77
SH3TC2-201ENST00000323829 CAVIN1Q6NZI2 390 aaKnown RBP10.24□□□□□ -0.77
SH3TC2-201ENST00000323829 DDX46Q7L014 1031 aaKnown RBP10.24□□□□□ -0.77
SH3TC2-201ENST00000323829 LRRC43Q8N309 656 aa10.24□□□□□ -0.77
SH3TC2-201ENST00000323829 ZCRB1Q8TBF4 217 aaKnown RBP10.24□□□□□ -0.77
SH3TC2-201ENST00000323829 FERMT1Q9BQL6 677 aa10.24□□□□□ -0.77
SH3TC2-201ENST00000323829 DACH1Q9UI36 760 aa10.24□□□□□ -0.77
SH3TC2-201ENST00000323829 ZNF710Q8N1W2 664 aa10.24□□□□□ -0.77
SH3TC2-201ENST00000323829 TSPY26PQ9H489 355 aa10.24□□□□□ -0.77
SH3TC2-201ENST00000323829 PRDM10Q9NQV6 1147 aa10.24□□□□□ -0.77
SH3TC2-201ENST00000323829 SCAPERQ9BY12 1400 aa10.24□□□□□ -0.77
SH3TC2-201ENST00000323829 PDE3AQ14432 1141 aa10.24□□□□□ -0.77
SH3TC2-201ENST00000323829 IFT140Q96RY7 1462 aa10.24□□□□□ -0.77
SH3TC2-201ENST00000323829 GOLGA6L9A6NEM1 432 aa10.23□□□□□ -0.77
SH3TC2-201ENST00000323829 WDR63Q8IWG1 891 aa10.23□□□□□ -0.77
SH3TC2-201ENST00000323829 GAS2L2Q8NHY3 880 aa10.23□□□□□ -0.77
SH3TC2-201ENST00000323829 ARID4AP29374 1257 aaPredicted RBP10.23□□□□□ -0.77
SH3TC2-201ENST00000323829 TAF12Q16514 161 aa10.23□□□□□ -0.77
SH3TC2-201ENST00000323829 ZNF219Q9P2Y4 722 aaPredicted RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms