RNA–Protein interactions for RNA: ENST00000322310.9

SSNA1-201, Transcript of SS nuclear autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSNA1, Length 896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-201ENST00000322310 PHKG2P15735 406 aa27.29■■□□□ 1.96
SSNA1-201ENST00000322310 N4BP2Q86UW6 1770 aaPredicted RBP27.29■■□□□ 1.96
SSNA1-201ENST00000322310 KIF13BQ9NQT8 1826 aa27.28■■□□□ 1.96
SSNA1-201ENST00000322310 ANKRD26Q9UPS8 1709 aa27.28■■□□□ 1.96
SSNA1-201ENST00000322310 APLP1P51693 650 aa27.28■■□□□ 1.96
SSNA1-201ENST00000322310 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.28■■□□□ 1.96
SSNA1-201ENST00000322310 WASHC2AQ641Q2 1341 aa27.27■■□□□ 1.96
SSNA1-201ENST00000322310 IFNL2Q8IZJ0 200 aa27.27■■□□□ 1.96
SSNA1-201ENST00000322310 TOMM70O94826 608 aa27.26■■□□□ 1.95
SSNA1-201ENST00000322310 TGFB2P61812 414 aa27.26■■□□□ 1.95
SSNA1-201ENST00000322310 C10orf71Q711Q0 1435 aa27.25■■□□□ 1.95
SSNA1-201ENST00000322310 KDRP35968 1356 aa27.25■■□□□ 1.95
SSNA1-201ENST00000322310 CDCA8Q53HL2 280 aa27.25■■□□□ 1.95
SSNA1-201ENST00000322310 ARHGAP27Q6ZUM4 889 aa27.25■■□□□ 1.95
SSNA1-201ENST00000322310 TRAPPC3LQ5T215 181 aa27.24■■□□□ 1.95
SSNA1-201ENST00000322310 DNAJC5GQ8N7S2 189 aa27.24■■□□□ 1.95
SSNA1-201ENST00000322310 SLC4A9Q96Q91 983 aa27.24■■□□□ 1.95
SSNA1-201ENST00000322310 NMRK2Q9NPI5 230 aa27.24■■□□□ 1.95
SSNA1-201ENST00000322310 RTCBQ9Y3I0 505 aaKnown RBP27.24■■□□□ 1.95
SSNA1-201ENST00000322310 DPEP1P16444 411 aa27.22■■□□□ 1.95
SSNA1-201ENST00000322310 NLGN1Q8N2Q7 840 aa27.22■■□□□ 1.95
SSNA1-201ENST00000322310 ARHGEF1Q92888 912 aaKnown RBP27.21■■□□□ 1.95
SSNA1-201ENST00000322310 FCHSD2O94868 740 aa27.2■■□□□ 1.94
SSNA1-201ENST00000322310 RBM42Q9BTD8 480 aaKnown RBP27.2■■□□□ 1.94
SSNA1-201ENST00000322310 POLKQ9UBT6 870 aa27.2■■□□□ 1.94
SSNA1-201ENST00000322310 C4AP0C0L4 1744 aa27.19■■□□□ 1.94
SSNA1-201ENST00000322310 GYS1P13807 737 aa27.19■■□□□ 1.94
SSNA1-201ENST00000322310 CCDC87Q9NVE4 849 aa27.19■■□□□ 1.94
SSNA1-201ENST00000322310 EIF4A2Q14240 407 aaKnown RBP27.17■■□□□ 1.94
SSNA1-201ENST00000322310 COL5A3P25940 1745 aaPredicted RBP27.16■■□□□ 1.94
SSNA1-201ENST00000322310 ADRA2BP18089 450 aa27.15■■□□□ 1.94
SSNA1-201ENST00000322310 RFC4P35249 363 aa27.15■■□□□ 1.94
SSNA1-201ENST00000322310 RC3H1Q5TC82 1133 aaKnown RBP27.15■■□□□ 1.94
SSNA1-201ENST00000322310 C9orf131Q5VYM1 1079 aa27.15■■□□□ 1.94
SSNA1-201ENST00000322310 PARP3Q9Y6F1 533 aa27.15■■□□□ 1.94
SSNA1-201ENST00000322310 BRCA1P38398 1863 aaKnown RBP27.15■■□□□ 1.94
SSNA1-201ENST00000322310 CNTNAP4Q9C0A0 1308 aa27.15■■□□□ 1.94
SSNA1-201ENST00000322310 ZNF831Q5JPB2 1677 aa27.14■■□□□ 1.94
SSNA1-201ENST00000322310 KCNA3P22001 575 aa27.14■■□□□ 1.94
SSNA1-201ENST00000322310 TNNT2P45379 298 aaPredicted RBP27.14■■□□□ 1.94
SSNA1-201ENST00000322310 HTRA3P83110 453 aa27.14■■□□□ 1.94
SSNA1-201ENST00000322310 ERVV-2B6SEH9 535 aa27.13■■□□□ 1.93
SSNA1-201ENST00000322310 RPS6KA4O75676 772 aa27.13■■□□□ 1.93
SSNA1-201ENST00000322310 WDR90Q96KV7 1748 aa27.13■■□□□ 1.93
SSNA1-201ENST00000322310 RBM46Q8TBY0 533 aaKnown RBP27.11■■□□□ 1.93
SSNA1-201ENST00000322310 KDM6AO15550 1401 aaPredicted RBP27.1■■□□□ 1.93
SSNA1-201ENST00000322310 DCAF5Q96JK2 942 aa27.1■■□□□ 1.93
SSNA1-201ENST00000322310 C16orf71Q8IYS4 520 aaPredicted RBP27.09■■□□□ 1.93
SSNA1-201ENST00000322310 PLEKHG2Q9H7P9 1386 aa27.09■■□□□ 1.93
SSNA1-201ENST00000322310 MYH14Q7Z406 1995 aaKnown RBP27.08■■□□□ 1.93
SSNA1-201ENST00000322310 KCPQ6ZWJ8 1503 aa27.08■■□□□ 1.93
SSNA1-201ENST00000322310 PIM2Q9P1W9 311 aa27.08■■□□□ 1.93
SSNA1-201ENST00000322310 SRP68Q9UHB9 627 aaKnown RBP27.08■■□□□ 1.93
SSNA1-201ENST00000322310 ARFGEF1Q9Y6D6 1849 aa27.07■■□□□ 1.92
SSNA1-201ENST00000322310 PTCD1O75127 700 aaKnown RBP27.07■■□□□ 1.92
SSNA1-201ENST00000322310 HSP90AB1P08238 724 aaKnown RBP27.07■■□□□ 1.92
SSNA1-201ENST00000322310 CABP4P57796 275 aa27.07■■□□□ 1.92
SSNA1-201ENST00000322310 FKBP8Q14318 412 aa27.06■■□□□ 1.92
SSNA1-201ENST00000322310 ZNF530Q6P9A1 599 aaPredicted RBP27.06■■□□□ 1.92
SSNA1-201ENST00000322310 KLRG1Q96E93 195 aa27.06■■□□□ 1.92
SSNA1-201ENST00000322310 DDR1Q08345 913 aa27.05■■□□□ 1.92
SSNA1-201ENST00000322310 PLEKHO1Q53GL0 409 aaPredicted RBP27.05■■□□□ 1.92
SSNA1-201ENST00000322310 DALRD3Q5D0E6 543 aaKnown RBP27.05■■□□□ 1.92
SSNA1-201ENST00000322310 RNF181Q9P0P0 153 aa27.05■■□□□ 1.92
SSNA1-201ENST00000322310 CRKLP46109 303 aaKnown RBP27.04■■□□□ 1.92
SSNA1-201ENST00000322310 CHRNA5P30532 468 aa27.03■■□□□ 1.92
SSNA1-201ENST00000322310 FSTL1Q12841 308 aa27.03■■□□□ 1.92
SSNA1-201ENST00000322310 KDM2BQ8NHM5 1336 aa27.03■■□□□ 1.92
SSNA1-201ENST00000322310 POLR3GLQ9BT43 218 aa27.03■■□□□ 1.92
SSNA1-201ENST00000322310 USP42Q9H9J4 1324 aaKnown RBP27.03■■□□□ 1.92
SSNA1-201ENST00000322310 COL13A1Q5TAT6 717 aaPredicted RBP27.02■■□□□ 1.92
SSNA1-201ENST00000322310 RRAGCQ9HB90 399 aa27.02■■□□□ 1.92
SSNA1-201ENST00000322310 MTHFSP49914 203 aa27■■□□□ 1.91
SSNA1-201ENST00000322310 JMYQ8N9B5 988 aa27■■□□□ 1.91
SSNA1-201ENST00000322310 NFATC2IPQ8NCF5 419 aa27■■□□□ 1.91
SSNA1-201ENST00000322310 AMOTQ4VCS5 1084 aa26.99■■□□□ 1.91
SSNA1-201ENST00000322310 AEBP1Q8IUX7 1158 aa26.99■■□□□ 1.91
SSNA1-201ENST00000322310 TJP1Q07157 1748 aa26.99■■□□□ 1.91
SSNA1-201ENST00000322310 POLRMTO00411 1230 aaKnown RBP26.96■■□□□ 1.91
SSNA1-201ENST00000322310 C1orf141Q5JVX7 400 aa26.96■■□□□ 1.91
SSNA1-201ENST00000322310 PCNTO95613 3336 aa26.96■■□□□ 1.91
SSNA1-201ENST00000322310 TNRC6CQ9HCJ0 1690 aaKnown RBP26.95■■□□□ 1.91
SSNA1-201ENST00000322310 INTS5Q6P9B9 1019 aaKnown RBP26.95■■□□□ 1.9
SSNA1-201ENST00000322310 ADAMTS7Q9UKP4 1686 aa26.95■■□□□ 1.9
SSNA1-201ENST00000322310 TM4SF1P30408 202 aa26.94■■□□□ 1.9
SSNA1-201ENST00000322310 RASSF7Q02833 373 aa26.94■■□□□ 1.9
SSNA1-201ENST00000322310 CAPN15O75808 1086 aa26.93■■□□□ 1.9
SSNA1-201ENST00000322310 SBF1O95248 1867 aa26.93■■□□□ 1.9
SSNA1-201ENST00000322310 USPL1Q5W0Q7 1092 aa26.91■■□□□ 1.9
SSNA1-201ENST00000322310 SMC1BQ8NDV3 1235 aa26.91■■□□□ 1.9
SSNA1-201ENST00000322310 DNAJC10Q8IXB1 793 aa26.9■■□□□ 1.9
SSNA1-201ENST00000322310 ZPR1O75312 459 aa26.89■■□□□ 1.9
SSNA1-201ENST00000322310 SULT6B1Q6IMI4 303 aa26.89■■□□□ 1.9
SSNA1-201ENST00000322310 PRELPP51888 382 aa26.88■■□□□ 1.89
SSNA1-201ENST00000322310 SOS1Q07889 1333 aaPredicted RBP26.88■■□□□ 1.89
SSNA1-201ENST00000322310 TNS4Q8IZW8 715 aa26.87■■□□□ 1.89
SSNA1-201ENST00000322310 PANK3Q9H999 370 aa26.87■■□□□ 1.89
SSNA1-201ENST00000322310 NFIXQ14938 502 aa26.86■■□□□ 1.89
SSNA1-201ENST00000322310 SCN11AQ9UI33 1791 aa26.85■■□□□ 1.89
SSNA1-201ENST00000322310 LMNB1P20700 586 aa26.84■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 279.5 ms