RNA–Protein interactions for RNA: ENST00000307808.10

AFF1-201, Transcript of AF4/FMR2 family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene AFF1, Length 9,390 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF1-201ENST00000307808 NUP88Q99567 741 aaPredicted RBP15.23■□□□□ 0.03
AFF1-201ENST00000307808 TOP1P11387 765 aaKnown RBP15.23■□□□□ 0.03
AFF1-201ENST00000307808 PIBF1Q8WXW3 757 aa15.23■□□□□ 0.03
AFF1-201ENST00000307808 SMARCC1Q92922 1105 aaPredicted RBP15.23■□□□□ 0.03
AFF1-201ENST00000307808 MPHOSPH8Q99549 860 aa15.23■□□□□ 0.03
AFF1-201ENST00000307808 NUTM2DQ5VT03 806 aaPredicted RBP15.23■□□□□ 0.03
AFF1-201ENST00000307808 NOL3O60936 208 aaKnown RBP15.23■□□□□ 0.03
AFF1-201ENST00000307808 TDO2P48775 406 aa15.23■□□□□ 0.03
AFF1-201ENST00000307808 KANK4Q5T7N3 995 aaPredicted RBP15.23■□□□□ 0.03
AFF1-201ENST00000307808 RAB3IL1Q8TBN0 382 aa15.23■□□□□ 0.03
AFF1-201ENST00000307808 MNAT1P51948 309 aa15.22■□□□□ 0.03
AFF1-201ENST00000307808 TTC14Q96N46 770 aa15.22■□□□□ 0.03
AFF1-201ENST00000307808 DYNC1I1O14576 645 aa15.22■□□□□ 0.03
AFF1-201ENST00000307808 TMEM266Q2M3C6 531 aa15.22■□□□□ 0.03
AFF1-201ENST00000307808 PPP1R14CQ8TAE6 165 aa15.22■□□□□ 0.03
AFF1-201ENST00000307808 ZNF428Q96B54 188 aa15.22■□□□□ 0.03
AFF1-201ENST00000307808 YEATS4O95619 227 aa15.22■□□□□ 0.03
AFF1-201ENST00000307808 BRPF3Q9ULD4 1205 aa15.22■□□□□ 0.03
AFF1-201ENST00000307808 NAP1L3Q99457 506 aaPredicted RBP15.22■□□□□ 0.03
AFF1-201ENST00000307808 EHMT1Q9H9B1 1298 aa15.22■□□□□ 0.03
AFF1-201ENST00000307808 RAI14Q9P0K7 980 aa15.21■□□□□ 0.03
AFF1-201ENST00000307808 SSBP05455 408 aaKnown RBP eCLIP15.21■□□□□ 0.03
AFF1-201ENST00000307808 ACTN2P35609 894 aa15.21■□□□□ 0.03
AFF1-201ENST00000307808 CKAP4Q07065 602 aaKnown RBP15.21■□□□□ 0.03
AFF1-201ENST00000307808 PNISRQ8TF01 805 aaKnown RBP15.21■□□□□ 0.03
AFF1-201ENST00000307808 GOLIM4O00461 696 aa15.2■□□□□ 0.02
AFF1-201ENST00000307808 CCDC155Q8N6L0 562 aa15.2■□□□□ 0.02
AFF1-201ENST00000307808 KIF4BQ2VIQ3 1234 aa15.2■□□□□ 0.02
AFF1-201ENST00000307808 DRC1Q96MC2 740 aa15.2■□□□□ 0.02
AFF1-201ENST00000307808 DNAAF4Q8WXU2 420 aa15.2■□□□□ 0.02
AFF1-201ENST00000307808 CTNNBL1Q8WYA6 563 aaPredicted RBP15.2■□□□□ 0.02
AFF1-201ENST00000307808 SH2B1Q9NRF2 756 aaPredicted RBP15.2■□□□□ 0.02
AFF1-201ENST00000307808 PDRG1Q9NUG6 133 aa15.2■□□□□ 0.02
AFF1-201ENST00000307808 PLEKHO1Q53GL0 409 aaPredicted RBP15.2■□□□□ 0.02
AFF1-201ENST00000307808 STXBP4Q6ZWJ1 553 aa15.2■□□□□ 0.02
AFF1-201ENST00000307808 GPATCH11Q8N954 259 aa15.2■□□□□ 0.02
AFF1-201ENST00000307808 NUP133Q8WUM0 1156 aa15.2■□□□□ 0.02
AFF1-201ENST00000307808 MYH9P35579 1960 aaKnown RBP15.2■□□□□ 0.02
AFF1-201ENST00000307808 KIF3CO14782 793 aa15.2■□□□□ 0.02
AFF1-201ENST00000307808 HLTFQ14527 1009 aaKnown RBP eCLIP15.2■□□□□ 0.02
AFF1-201ENST00000307808 RASAL2Q9UJF2 1139 aa15.2■□□□□ 0.02
AFF1-201ENST00000307808 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.2■□□□□ 0.02
AFF1-201ENST00000307808 MKRN1Q9UHC7 482 aaKnown RBP15.19■□□□□ 0.02
AFF1-201ENST00000307808 IQCGQ9H095 443 aaKnown RBP15.19■□□□□ 0.02
AFF1-201ENST00000307808 HSF2BPO75031 334 aa15.19■□□□□ 0.02
AFF1-201ENST00000307808 MSL1Q68DK7 614 aa15.19■□□□□ 0.02
AFF1-201ENST00000307808 ITSN2Q9NZM3 1697 aa15.19■□□□□ 0.02
AFF1-201ENST00000307808 SWAP70Q9UH65 585 aa15.19■□□□□ 0.02
AFF1-201ENST00000307808 PRPHP41219 470 aa15.19■□□□□ 0.02
AFF1-201ENST00000307808 FERMT2Q96AC1 680 aa15.19■□□□□ 0.02
AFF1-201ENST00000307808 A0A087WZG4 1122 aa15.19■□□□□ 0.02
AFF1-201ENST00000307808 WDHD1O75717 1129 aaPredicted RBP15.19■□□□□ 0.02
AFF1-201ENST00000307808 CASTP20810 708 aaKnown RBP15.19■□□□□ 0.02
AFF1-201ENST00000307808 A0A1W2PRG0 241 aa15.18■□□□□ 0.02
AFF1-201ENST00000307808 CCDC6Q16204 474 aa15.18■□□□□ 0.02
AFF1-201ENST00000307808 CLIP2Q9UDT6 1046 aa15.18■□□□□ 0.02
AFF1-201ENST00000307808 AMPD3Q01432 767 aa15.18■□□□□ 0.02
AFF1-201ENST00000307808 HMOX1P09601 288 aa15.18■□□□□ 0.02
AFF1-201ENST00000307808 KANK3Q6NY19 840 aa15.18■□□□□ 0.02
AFF1-201ENST00000307808 SYCE3A1L190 88 aa15.18■□□□□ 0.02
AFF1-201ENST00000307808 ANAPC4Q9UJX5 808 aa15.18■□□□□ 0.02
AFF1-201ENST00000307808 DHX37Q8IY37 1157 aaKnown RBP15.18■□□□□ 0.02
AFF1-201ENST00000307808 STX1AQ16623 288 aa15.17■□□□□ 0.02
AFF1-201ENST00000307808 FBF1Q8TES7 1133 aa15.17■□□□□ 0.02
AFF1-201ENST00000307808 SETSIPP0DME0 302 aa15.17■□□□□ 0.02
AFF1-201ENST00000307808 EHBP1L1Q8N3D4 1523 aa15.17■□□□□ 0.02
AFF1-201ENST00000307808 CEP135Q66GS9 1140 aa15.17■□□□□ 0.02
AFF1-201ENST00000307808 GTPBP4Q9BZE4 634 aaKnown RBP15.17■□□□□ 0.02
AFF1-201ENST00000307808 KIF4AO95239 1232 aa15.17■□□□□ 0.02
AFF1-201ENST00000307808 STK3Q13188 491 aa15.17■□□□□ 0.02
AFF1-201ENST00000307808 MACROD2A1Z1Q3 448 aa15.17■□□□□ 0.02
AFF1-201ENST00000307808 PRIMPOLQ96LW4 560 aa15.17■□□□□ 0.02
AFF1-201ENST00000307808 SLU7O95391 586 aaKnown RBP15.16■□□□□ 0.02
AFF1-201ENST00000307808 PPM1FP49593 454 aaPredicted RBP15.16■□□□□ 0.02
AFF1-201ENST00000307808 CCDC12Q8WUD4 166 aaPredicted RBP15.16■□□□□ 0.02
AFF1-201ENST00000307808 SMC6Q96SB8 1091 aa15.16■□□□□ 0.02
AFF1-201ENST00000307808 GTF2A1P52655 376 aaPredicted RBP15.16■□□□□ 0.02
AFF1-201ENST00000307808 CPSF2Q9P2I0 782 aaKnown RBP15.16■□□□□ 0.02
AFF1-201ENST00000307808 USP37Q86T82 979 aa15.15■□□□□ 0.02
AFF1-201ENST00000307808 JAKMIP2Q96AA8 810 aa15.15■□□□□ 0.02
AFF1-201ENST00000307808 CCDC171Q6TFL3 1326 aa15.15■□□□□ 0.02
AFF1-201ENST00000307808 CEP83Q9Y592 693 aa15.15■□□□□ 0.02
AFF1-201ENST00000307808 CHD1LQ86WJ1 897 aa15.15■□□□□ 0.02
AFF1-201ENST00000307808 IPO4Q8TEX9 1081 aaKnown RBP15.15■□□□□ 0.02
AFF1-201ENST00000307808 ARFGAP3Q9NP61 516 aa15.15■□□□□ 0.02
AFF1-201ENST00000307808 FAM135AQ9P2D6 1515 aa15.15■□□□□ 0.02
AFF1-201ENST00000307808 FKBP4Q02790 459 aaKnown RBP eCLIP15.15■□□□□ 0.02
AFF1-201ENST00000307808 RBM5P52756 815 aaKnown RBP eCLIP15.14■□□□□ 0.01
AFF1-201ENST00000307808 DAPK1P53355 1430 aa15.14■□□□□ 0.01
AFF1-201ENST00000307808 CCDC14Q49A88 953 aa15.14■□□□□ 0.01
AFF1-201ENST00000307808 SELENOOQ9BVL4 669 aa15.14■□□□□ 0.01
AFF1-201ENST00000307808 MCM4P33991 863 aa15.14■□□□□ 0.01
AFF1-201ENST00000307808 MAP7D1Q3KQU3 841 aa15.14■□□□□ 0.01
AFF1-201ENST00000307808 CCDC110Q8TBZ0 833 aa15.14■□□□□ 0.01
AFF1-201ENST00000307808 RAB11FIP3O75154 756 aa15.14■□□□□ 0.01
AFF1-201ENST00000307808 ZFYP08048 801 aaPredicted RBP15.14■□□□□ 0.01
AFF1-201ENST00000307808 TBC1D5Q92609 795 aa15.14■□□□□ 0.01
AFF1-201ENST00000307808 NLRP2Q9NX02 1062 aa15.14■□□□□ 0.01
AFF1-201ENST00000307808 TUBB4AP04350 444 aa15.14■□□□□ 0.01
AFF1-201ENST00000307808 DNAJC21Q5F1R6 531 aaKnown RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms